Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PHOX2BQ99453 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PHOX2BQ99453 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PHOX2BQ99453 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PHOX2BQ99453 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PHOX2BQ99453 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PHOX2BQ99453 RNU1-44P-201ENST00000384453 163 ntBASIC4.01□□□□□ -1.77
PHOX2BQ99453 MIR1911-201ENST00000410783 80 ntBASIC4.01□□□□□ -1.77
PHOX2BQ99453 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.01□□□□□ -1.77
PHOX2BQ99453 SCARNA14-201ENST00000516903 136 ntBASIC4.01□□□□□ -1.77
PHOX2BQ99453 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4.01□□□□□ -1.77
PHOX2BQ99453 AC020914.4-201ENST00000597690 277 ntBASIC4.01□□□□□ -1.77
PHOX2BQ99453 AL355297.2-201ENST00000604792 129 ntBASIC4.01□□□□□ -1.77
PHOX2BQ99453 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PHOX2BQ99453 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PHOX2BQ99453 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
PHOX2BQ99453 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PHOX2BQ99453 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PHOX2BQ99453 AC068647.1-201ENST00000489539 2265 ntBASIC4□□□□□ -1.77
PHOX2BQ99453 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC4□□□□□ -1.77
PHOX2BQ99453 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4□□□□□ -1.77
PHOX2BQ99453 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4□□□□□ -1.77
PHOX2BQ99453 MIR340-201ENST00000362125 95 ntBASIC4□□□□□ -1.77
PHOX2BQ99453 RNU6-414P-201ENST00000363705 104 ntBASIC4□□□□□ -1.77
PHOX2BQ99453 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4□□□□□ -1.77
PHOX2BQ99453 SNORA26.2-201ENST00000390922 122 ntBASIC4□□□□□ -1.77
PHOX2BQ99453 MIR548O-201ENST00000408583 114 ntBASIC4□□□□□ -1.77
PHOX2BQ99453 MIR1183-201ENST00000408856 89 ntBASIC4□□□□□ -1.77
PHOX2BQ99453 SRIP3-201ENST00000413200 219 ntBASIC4□□□□□ -1.77
PHOX2BQ99453 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC4□□□□□ -1.77
PHOX2BQ99453 RNU1-131P-201ENST00000458943 161 ntBASIC4□□□□□ -1.77
PHOX2BQ99453 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4□□□□□ -1.77
PHOX2BQ99453 AC023141.11-201ENST00000508864 202 ntBASIC4□□□□□ -1.77
PHOX2BQ99453 MIR5009-201ENST00000578736 100 ntBASIC4□□□□□ -1.77
PHOX2BQ99453 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4□□□□□ -1.77
PHOX2BQ99453 MAPK10-322ENST00000641485 4530 ntBASIC4□□□□□ -1.77
PHOX2BQ99453 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PHOX2BQ99453 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
PHOX2BQ99453 RNU1-23P-201ENST00000363361 144 ntBASIC3.99□□□□□ -1.77
PHOX2BQ99453 Y_RNA.362-201ENST00000365518 110 ntBASIC3.99□□□□□ -1.77
PHOX2BQ99453 SNORD66.1-201ENST00000391230 76 ntBASIC3.99□□□□□ -1.77
PHOX2BQ99453 SNORA3.3-201ENST00000408712 125 ntBASIC3.99□□□□□ -1.77
PHOX2BQ99453 RN7SL585P-201ENST00000470538 280 ntBASIC3.99□□□□□ -1.77
PHOX2BQ99453 RNU6-1041P-201ENST00000516254 102 ntBASIC3.99□□□□□ -1.77
PHOX2BQ99453 RNU6-158P-201ENST00000517104 100 ntBASIC3.99□□□□□ -1.77
PHOX2BQ99453 MIR3945-201ENST00000581853 98 ntBASIC3.99□□□□□ -1.77
PHOX2BQ99453 MIR4762-201ENST00000585261 75 ntBASIC3.99□□□□□ -1.77
PHOX2BQ99453 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.99□□□□□ -1.77
PHOX2BQ99453 AL035470.1-201ENST00000622571 220 ntBASIC3.99□□□□□ -1.77
PHOX2BQ99453 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.99□□□□□ -1.77
PHOX2BQ99453 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.99□□□□□ -1.77
PHOX2BQ99453 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
PHOX2BQ99453 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PHOX2BQ99453 TNPO1P3-201ENST00000436471 2662 ntBASIC3.98□□□□□ -1.77
PHOX2BQ99453 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.98□□□□□ -1.77
PHOX2BQ99453 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PHOX2BQ99453 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PHOX2BQ99453 SNORD115-28-201ENST00000363931 81 ntBASIC3.98□□□□□ -1.77
PHOX2BQ99453 RNA5SP467-201ENST00000391274 118 ntBASIC3.98□□□□□ -1.77
PHOX2BQ99453 MIR1251-201ENST00000408552 70 ntBASIC3.98□□□□□ -1.77
PHOX2BQ99453 RNA5SP306-201ENST00000411087 107 ntBASIC3.98□□□□□ -1.77
PHOX2BQ99453 U3.44-201ENST00000458938 192 ntBASIC3.98□□□□□ -1.77
PHOX2BQ99453 RNU7-80P-201ENST00000459562 61 ntBASIC3.98□□□□□ -1.77
PHOX2BQ99453 RN7SKP18-201ENST00000516005 275 ntBASIC3.98□□□□□ -1.77
PHOX2BQ99453 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.98□□□□□ -1.77
PHOX2BQ99453 AL360157.1-201ENST00000565962 87 ntBASIC3.98□□□□□ -1.77
PHOX2BQ99453 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.98□□□□□ -1.77
PHOX2BQ99453 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.98□□□□□ -1.77
PHOX2BQ99453 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
PHOX2BQ99453 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.97□□□□□ -1.77
PHOX2BQ99453 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PHOX2BQ99453 Y_RNA.99-201ENST00000363138 105 ntBASIC3.97□□□□□ -1.77
PHOX2BQ99453 SNORA38.1-201ENST00000364172 131 ntBASIC3.97□□□□□ -1.77
PHOX2BQ99453 U8.5-201ENST00000364528 136 ntBASIC3.97□□□□□ -1.77
PHOX2BQ99453 RNA5SP51-201ENST00000364750 119 ntBASIC3.97□□□□□ -1.77
PHOX2BQ99453 RNU1-133P-201ENST00000364867 167 ntBASIC3.97□□□□□ -1.77
PHOX2BQ99453 snoU2-30.1-201ENST00000365012 70 ntBASIC3.97□□□□□ -1.77
PHOX2BQ99453 Y_RNA.454-201ENST00000384224 113 ntBASIC3.97□□□□□ -1.77
PHOX2BQ99453 RNU1-101P-201ENST00000391171 127 ntBASIC3.97□□□□□ -1.77
PHOX2BQ99453 RNU2-48P-201ENST00000410694 191 ntBASIC3.97□□□□□ -1.77
PHOX2BQ99453 AC005326.1-201ENST00000429197 123 ntBASIC3.97□□□□□ -1.77
PHOX2BQ99453 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.97□□□□□ -1.77
PHOX2BQ99453 MIR2114-201ENST00000516645 80 ntBASIC3.97□□□□□ -1.77
PHOX2BQ99453 RNY4P20-201ENST00000516678 93 ntBASIC3.97□□□□□ -1.77
PHOX2BQ99453 RNA5SP179-201ENST00000517284 121 ntBASIC3.97□□□□□ -1.77
PHOX2BQ99453 AC068339.1-201ENST00000526965 141 ntBASIC3.97□□□□□ -1.77
PHOX2BQ99453 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.97□□□□□ -1.77
PHOX2BQ99453 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.97□□□□□ -1.77
PHOX2BQ99453 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.97□□□□□ -1.77
PHOX2BQ99453 AC021443.1-201ENST00000604478 211 ntBASIC3.97□□□□□ -1.77
PHOX2BQ99453 AL137849.1-201ENST00000604767 169 ntBASIC3.97□□□□□ -1.77
PHOX2BQ99453 YPEL5P2-201ENST00000605553 359 ntBASIC3.97□□□□□ -1.77
PHOX2BQ99453 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.96□□□□□ -1.77
PHOX2BQ99453 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.77
PHOX2BQ99453 RNU6-1084P-201ENST00000362498 107 ntBASIC3.96□□□□□ -1.78
PHOX2BQ99453 RNA5SP50-201ENST00000363731 107 ntBASIC3.96□□□□□ -1.78
PHOX2BQ99453 Y_RNA.220-201ENST00000364244 109 ntBASIC3.96□□□□□ -1.78
PHOX2BQ99453 Y_RNA.336-201ENST00000365307 109 ntBASIC3.96□□□□□ -1.78
PHOX2BQ99453 MIR591-201ENST00000385290 95 ntBASIC3.96□□□□□ -1.78
PHOX2BQ99453 RNU6-440P-201ENST00000390882 105 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms