Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC025465.3-201ENST00000510570 311 ntBASIC1.84□□□□□ -2.11
NR1H4Q96RI1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.84□□□□□ -2.11
NR1H4Q96RI1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.84□□□□□ -2.11
NR1H4Q96RI1 DEFB122-202ENST00000569013 197 ntBASIC1.84□□□□□ -2.11
NR1H4Q96RI1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.84□□□□□ -2.11
NR1H4Q96RI1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.84□□□□□ -2.11
NR1H4Q96RI1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
NR1H4Q96RI1 RNU6-324P-201ENST00000363957 106 ntBASIC1.83□□□□□ -2.12
NR1H4Q96RI1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.83□□□□□ -2.12
NR1H4Q96RI1 AC117470.1-201ENST00000381974 330 ntBASIC1.83□□□□□ -2.12
NR1H4Q96RI1 RNU6-376P-201ENST00000384731 106 ntBASIC1.83□□□□□ -2.12
NR1H4Q96RI1 RNU5A-5P-201ENST00000411054 116 ntBASIC1.83□□□□□ -2.12
NR1H4Q96RI1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.83□□□□□ -2.12
NR1H4Q96RI1 snoU13.27-201ENST00000459278 104 ntBASIC1.83□□□□□ -2.12
NR1H4Q96RI1 RNU6-155P-201ENST00000516347 100 ntBASIC1.83□□□□□ -2.12
NR1H4Q96RI1 Y_RNA.721-201ENST00000517207 102 ntBASIC1.83□□□□□ -2.12
NR1H4Q96RI1 RNU2-12P-201ENST00000517216 168 ntBASIC1.83□□□□□ -2.12
NR1H4Q96RI1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.83□□□□□ -2.12
NR1H4Q96RI1 AC005828.6-201ENST00000606610 232 ntBASIC1.83□□□□□ -2.12
NR1H4Q96RI1 AC103810.8-201ENST00000607347 118 ntBASIC1.83□□□□□ -2.12
NR1H4Q96RI1 MIR8074-201ENST00000615081 81 ntBASIC1.83□□□□□ -2.12
NR1H4Q96RI1 MIR6873-201ENST00000622788 63 ntBASIC1.83□□□□□ -2.12
NR1H4Q96RI1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.83□□□□□ -2.12
NR1H4Q96RI1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.82□□□□□ -2.12
NR1H4Q96RI1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
NR1H4Q96RI1 Y_RNA.148-201ENST00000363557 117 ntBASIC1.82□□□□□ -2.12
NR1H4Q96RI1 SNORA63.7-201ENST00000365579 123 ntBASIC1.82□□□□□ -2.12
NR1H4Q96RI1 Y_RNA.394-201ENST00000383942 103 ntBASIC1.82□□□□□ -2.12
NR1H4Q96RI1 Y_RNA.458-201ENST00000384240 102 ntBASIC1.82□□□□□ -2.12
NR1H4Q96RI1 MIR30A-201ENST00000385092 71 ntBASIC1.82□□□□□ -2.12
NR1H4Q96RI1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
NR1H4Q96RI1 AL079342.1-201ENST00000401460 267 ntBASIC1.82□□□□□ -2.12
NR1H4Q96RI1 RNU6-101P-201ENST00000410323 104 ntBASIC1.82□□□□□ -2.12
NR1H4Q96RI1 RPL23AP36-201ENST00000413895 458 ntBASIC1.82□□□□□ -2.12
NR1H4Q96RI1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.82□□□□□ -2.12
NR1H4Q96RI1 AC005002.2-201ENST00000438228 269 ntBASIC1.82□□□□□ -2.12
NR1H4Q96RI1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
NR1H4Q96RI1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.82□□□□□ -2.12
NR1H4Q96RI1 AC022616.4-201ENST00000522985 181 ntBASIC1.82□□□□□ -2.12
NR1H4Q96RI1 MIR4709-201ENST00000577272 72 ntBASIC1.82□□□□□ -2.12
NR1H4Q96RI1 AC073413.2-201ENST00000604332 360 ntBASIC1.82□□□□□ -2.12
NR1H4Q96RI1 AC124312.5-201ENST00000604451 268 ntBASIC1.82□□□□□ -2.12
NR1H4Q96RI1 U6.108-201ENST00000637764 58 ntBASIC1.82□□□□□ -2.12
NR1H4Q96RI1 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
NR1H4Q96RI1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
NR1H4Q96RI1 Y_RNA.101-201ENST00000363154 102 ntBASIC1.81□□□□□ -2.12
NR1H4Q96RI1 RNU1-22P-201ENST00000363334 158 ntBASIC1.81□□□□□ -2.12
NR1H4Q96RI1 Y_RNA.138-201ENST00000363462 102 ntBASIC1.81□□□□□ -2.12
NR1H4Q96RI1 SNORD115-30-201ENST00000364117 82 ntBASIC1.81□□□□□ -2.12
NR1H4Q96RI1 RNU6-1175P-201ENST00000365200 107 ntBASIC1.81□□□□□ -2.12
NR1H4Q96RI1 Y_RNA.462-201ENST00000384268 102 ntBASIC1.81□□□□□ -2.12
NR1H4Q96RI1 MIR562-201ENST00000384894 95 ntBASIC1.81□□□□□ -2.12
NR1H4Q96RI1 RNA5SP109-201ENST00000391010 116 ntBASIC1.81□□□□□ -2.12
NR1H4Q96RI1 MIR1267-201ENST00000408723 78 ntBASIC1.81□□□□□ -2.12
NR1H4Q96RI1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.81□□□□□ -2.12
NR1H4Q96RI1 AC245047.3-201ENST00000429428 127 ntBASIC1.81□□□□□ -2.12
NR1H4Q96RI1 RNU7-34P-201ENST00000459394 64 ntBASIC1.81□□□□□ -2.12
NR1H4Q96RI1 RPS26P55-201ENST00000471178 356 ntBASIC1.81□□□□□ -2.12
NR1H4Q96RI1 AL163540.1-201ENST00000485382 386 ntBASIC1.81□□□□□ -2.12
NR1H4Q96RI1 AC055872.1-201ENST00000570978 278 ntBASIC1.81□□□□□ -2.12
NR1H4Q96RI1 MIR3198-2-201ENST00000577868 80 ntBASIC1.81□□□□□ -2.12
NR1H4Q96RI1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.81□□□□□ -2.12
NR1H4Q96RI1 AC044792.1-201ENST00000593294 196 ntBASIC1.81□□□□□ -2.12
NR1H4Q96RI1 AC011373.1-201ENST00000607270 237 ntBASIC1.81□□□□□ -2.12
NR1H4Q96RI1 AC018630.2-201ENST00000534866 2403 ntBASIC1.81□□□□□ -2.12
NR1H4Q96RI1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
NR1H4Q96RI1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.8□□□□□ -2.12
NR1H4Q96RI1 AL356292.1-201ENST00000283110 373 ntBASIC1.8□□□□□ -2.12
NR1H4Q96RI1 Y_RNA.446-201ENST00000384178 104 ntBASIC1.8□□□□□ -2.12
NR1H4Q96RI1 Y_RNA.570-201ENST00000384750 101 ntBASIC1.8□□□□□ -2.12
NR1H4Q96RI1 MRPL42P3-201ENST00000401492 326 ntBASIC1.8□□□□□ -2.12
NR1H4Q96RI1 AL354751.2-201ENST00000415471 210 ntBASIC1.8□□□□□ -2.12
NR1H4Q96RI1 AC005042.3-201ENST00000453230 174 ntBASIC1.8□□□□□ -2.12
NR1H4Q96RI1 Y_RNA.701-201ENST00000516812 110 ntBASIC1.8□□□□□ -2.12
NR1H4Q96RI1 Y_RNA.711-201ENST00000516993 102 ntBASIC1.8□□□□□ -2.12
NR1H4Q96RI1 RNU7-128P-201ENST00000517247 62 ntBASIC1.8□□□□□ -2.12
NR1H4Q96RI1 MIR5089-201ENST00000580047 84 ntBASIC1.8□□□□□ -2.12
NR1H4Q96RI1 MIR3162-201ENST00000581818 82 ntBASIC1.8□□□□□ -2.12
NR1H4Q96RI1 MIR4672-201ENST00000583126 81 ntBASIC1.8□□□□□ -2.12
NR1H4Q96RI1 AC022441.3-201ENST00000605737 136 ntBASIC1.8□□□□□ -2.12
NR1H4Q96RI1 AC040896.1-201ENST00000613819 479 ntBASIC1.8□□□□□ -2.12
NR1H4Q96RI1 AC127459.3-201ENST00000624328 466 ntBASIC1.8□□□□□ -2.12
NR1H4Q96RI1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NR1H4Q96RI1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NR1H4Q96RI1 Y_RNA.202-201ENST00000364083 110 ntBASIC1.79□□□□□ -2.12
NR1H4Q96RI1 SNORD48-201ENST00000364953 64 ntBASIC1.79□□□□□ -2.12
NR1H4Q96RI1 SNORA22B-201ENST00000383876 138 ntBASIC1.79□□□□□ -2.12
NR1H4Q96RI1 Y_RNA.389-201ENST00000383924 113 ntBASIC1.79□□□□□ -2.12
NR1H4Q96RI1 RNU6-439P-201ENST00000384188 106 ntBASIC1.79□□□□□ -2.12
NR1H4Q96RI1 Y_RNA.551-201ENST00000384661 102 ntBASIC1.79□□□□□ -2.12
NR1H4Q96RI1 RPL21P1-201ENST00000399532 476 ntBASIC1.79□□□□□ -2.12
NR1H4Q96RI1 AL031003.1-201ENST00000404229 172 ntBASIC1.79□□□□□ -2.12
NR1H4Q96RI1 RN7SKP200-201ENST00000410564 320 ntBASIC1.79□□□□□ -2.12
NR1H4Q96RI1 RNU4-53P-201ENST00000410828 140 ntBASIC1.79□□□□□ -2.12
NR1H4Q96RI1 RPEP5-201ENST00000441137 268 ntBASIC1.79□□□□□ -2.12
NR1H4Q96RI1 RNU7-110P-201ENST00000516891 62 ntBASIC1.79□□□□□ -2.12
NR1H4Q96RI1 AC091544.4-201ENST00000555268 342 ntBASIC1.79□□□□□ -2.12
NR1H4Q96RI1 IGHVIII-44-202ENST00000636235 289 ntBASIC1.79□□□□□ -2.12
NR1H4Q96RI1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NR1H4Q96RI1 Y_RNA.331-201ENST00000365267 102 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 200.3 ms