Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RPL32P35-201ENST00000415214 394 ntBASIC3.46□□□□□ -1.85
SYNGAP1Q96PV0 RPL23AP7-203ENST00000449021 469 ntBASIC3.46□□□□□ -1.85
SYNGAP1Q96PV0 RNU7-197P-201ENST00000458836 62 ntBASIC3.46□□□□□ -1.85
SYNGAP1Q96PV0 AC245166.1-201ENST00000521012 253 ntBASIC3.46□□□□□ -1.85
SYNGAP1Q96PV0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
SYNGAP1Q96PV0 MIR4319-201ENST00000577285 85 ntBASIC3.46□□□□□ -1.85
SYNGAP1Q96PV0 MIR3646-201ENST00000578301 84 ntBASIC3.46□□□□□ -1.85
SYNGAP1Q96PV0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.46□□□□□ -1.85
SYNGAP1Q96PV0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SYNGAP1Q96PV0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SYNGAP1Q96PV0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.46□□□□□ -1.86
SYNGAP1Q96PV0 AL356292.1-201ENST00000283110 373 ntBASIC3.45□□□□□ -1.86
SYNGAP1Q96PV0 Y_RNA.164-201ENST00000363709 102 ntBASIC3.45□□□□□ -1.86
SYNGAP1Q96PV0 Y_RNA.796-201ENST00000364268 102 ntBASIC3.45□□□□□ -1.86
SYNGAP1Q96PV0 RNU4-41P-201ENST00000364426 143 ntBASIC3.45□□□□□ -1.86
SYNGAP1Q96PV0 Y_RNA.799-201ENST00000364992 102 ntBASIC3.45□□□□□ -1.86
SYNGAP1Q96PV0 MIR1283-1-201ENST00000408494 87 ntBASIC3.45□□□□□ -1.86
SYNGAP1Q96PV0 MIR1294-201ENST00000408503 142 ntBASIC3.45□□□□□ -1.86
SYNGAP1Q96PV0 EIF4EP4-201ENST00000424916 578 ntBASIC3.45□□□□□ -1.86
SYNGAP1Q96PV0 AC022018.1-201ENST00000430685 241 ntBASIC3.45□□□□□ -1.86
SYNGAP1Q96PV0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.45□□□□□ -1.86
SYNGAP1Q96PV0 AC083906.5-201ENST00000503722 328 ntBASIC3.45□□□□□ -1.86
SYNGAP1Q96PV0 MRPS36P2-201ENST00000512569 299 ntBASIC3.45□□□□□ -1.86
SYNGAP1Q96PV0 RNU6-63P-201ENST00000516690 95 ntBASIC3.45□□□□□ -1.86
SYNGAP1Q96PV0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.45□□□□□ -1.86
SYNGAP1Q96PV0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
SYNGAP1Q96PV0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SYNGAP1Q96PV0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SYNGAP1Q96PV0 RNU1-105P-201ENST00000363470 161 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 SNORD45.3-201ENST00000363836 72 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 RNU4-13P-201ENST00000364019 141 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 RNU6-915P-201ENST00000364943 103 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 Y_RNA.361-201ENST00000365515 120 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 RNU6-136P-201ENST00000384663 107 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 MIR29B2-201ENST00000385055 81 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 AL135938.1-201ENST00000443141 297 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 AC016717.1-201ENST00000448918 286 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 RNU7-107P-201ENST00000459121 61 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 RPL36AP21-201ENST00000490372 323 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 RNA5SP367-201ENST00000516557 118 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 AC103810.1-201ENST00000579873 453 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 AC005972.2-201ENST00000604690 348 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 AL355596.1-201ENST00000565399 3996 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 AC073325.2-201ENST00000339545 159 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 RNU6-271P-201ENST00000363858 105 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 SNORD32B-201ENST00000364460 84 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 Y_RNA.525-201ENST00000384570 113 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 MIR300-201ENST00000401138 83 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 RAC1P5-201ENST00000512182 576 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 AC093331.1-201ENST00000521474 169 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 snoZ196.1-201ENST00000625269 89 ntBASIC3.44□□□□□ -1.86
SYNGAP1Q96PV0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.43□□□□□ -1.86
SYNGAP1Q96PV0 AC010680.1-201ENST00000590024 3590 ntBASIC3.43□□□□□ -1.86
SYNGAP1Q96PV0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SYNGAP1Q96PV0 SNORA27.1-201ENST00000362604 124 ntBASIC3.43□□□□□ -1.86
SYNGAP1Q96PV0 RNY1P11-201ENST00000363759 113 ntBASIC3.43□□□□□ -1.86
SYNGAP1Q96PV0 RNU6-1082P-201ENST00000364574 107 ntBASIC3.43□□□□□ -1.86
SYNGAP1Q96PV0 RNU6-1336P-201ENST00000383886 109 ntBASIC3.43□□□□□ -1.86
SYNGAP1Q96PV0 RNU6-851P-201ENST00000384565 107 ntBASIC3.43□□□□□ -1.86
SYNGAP1Q96PV0 SNORA75.5-201ENST00000391291 81 ntBASIC3.43□□□□□ -1.86
SYNGAP1Q96PV0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.43□□□□□ -1.86
SYNGAP1Q96PV0 RPS12P18-201ENST00000442381 270 ntBASIC3.43□□□□□ -1.86
SYNGAP1Q96PV0 AL109933.2-201ENST00000452651 260 ntBASIC3.43□□□□□ -1.86
SYNGAP1Q96PV0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.43□□□□□ -1.86
SYNGAP1Q96PV0 SNORD65B-201ENST00000459126 73 ntBASIC3.43□□□□□ -1.86
SYNGAP1Q96PV0 RNU6-437P-201ENST00000459408 95 ntBASIC3.43□□□□□ -1.86
SYNGAP1Q96PV0 RNA5SP20-201ENST00000515976 84 ntBASIC3.43□□□□□ -1.86
SYNGAP1Q96PV0 AP003357.1-201ENST00000604497 148 ntBASIC3.43□□□□□ -1.86
SYNGAP1Q96PV0 U7.2-201ENST00000607576 63 ntBASIC3.43□□□□□ -1.86
SYNGAP1Q96PV0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.43□□□□□ -1.86
SYNGAP1Q96PV0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.42□□□□□ -1.86
SYNGAP1Q96PV0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.42□□□□□ -1.86
SYNGAP1Q96PV0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SYNGAP1Q96PV0 MIR148B-201ENST00000362252 99 ntBASIC3.42□□□□□ -1.86
SYNGAP1Q96PV0 RNU6-235P-201ENST00000362644 107 ntBASIC3.42□□□□□ -1.86
SYNGAP1Q96PV0 SNORA63.4-201ENST00000362763 126 ntBASIC3.42□□□□□ -1.86
SYNGAP1Q96PV0 RNU6-153P-201ENST00000364422 104 ntBASIC3.42□□□□□ -1.86
SYNGAP1Q96PV0 Y_RNA.584-201ENST00000391090 114 ntBASIC3.42□□□□□ -1.86
SYNGAP1Q96PV0 AC105272.1-201ENST00000438604 198 ntBASIC3.42□□□□□ -1.86
SYNGAP1Q96PV0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.42□□□□□ -1.86
SYNGAP1Q96PV0 RPS26P55-201ENST00000471178 356 ntBASIC3.42□□□□□ -1.86
SYNGAP1Q96PV0 RNA5SP458-201ENST00000516188 119 ntBASIC3.42□□□□□ -1.86
SYNGAP1Q96PV0 AC127455.1-201ENST00000565496 145 ntBASIC3.42□□□□□ -1.86
SYNGAP1Q96PV0 MIR4474-201ENST00000579189 78 ntBASIC3.42□□□□□ -1.86
SYNGAP1Q96PV0 AL049861.1-201ENST00000603130 150 ntBASIC3.42□□□□□ -1.86
SYNGAP1Q96PV0 AC046143.2-201ENST00000609789 160 ntBASIC3.42□□□□□ -1.86
SYNGAP1Q96PV0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SYNGAP1Q96PV0 AC096644.4-201ENST00000563417 2912 ntBASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SYNGAP1Q96PV0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms