Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 RNU6-1257P-201ENST00000384625 110 ntBASIC-0.57□□□□□ -2.5
CCDC115Q96NT0 MIR329-1-201ENST00000385028 80 ntBASIC-0.57□□□□□ -2.5
CCDC115Q96NT0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.57□□□□□ -2.5
CCDC115Q96NT0 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.57□□□□□ -2.5
CCDC115Q96NT0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.57□□□□□ -2.5
CCDC115Q96NT0 RNA5SP54-201ENST00000516951 92 ntBASIC-0.57□□□□□ -2.5
CCDC115Q96NT0 MIR4775-201ENST00000581168 75 ntBASIC-0.57□□□□□ -2.5
CCDC115Q96NT0 MIR4802-201ENST00000581881 80 ntBASIC-0.57□□□□□ -2.5
CCDC115Q96NT0 AP001180.6-201ENST00000584918 159 ntBASIC-0.57□□□□□ -2.5
CCDC115Q96NT0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.57□□□□□ -2.5
CCDC115Q96NT0 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.58□□□□□ -2.5
CCDC115Q96NT0 MIR106A-201ENST00000384870 81 ntBASIC-0.58□□□□□ -2.5
CCDC115Q96NT0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.58□□□□□ -2.5
CCDC115Q96NT0 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.58□□□□□ -2.5
CCDC115Q96NT0 HMGN2P22-201ENST00000427588 175 ntBASIC-0.58□□□□□ -2.5
CCDC115Q96NT0 AC015818.7-201ENST00000428754 109 ntBASIC-0.58□□□□□ -2.5
CCDC115Q96NT0 MTND3P9-201ENST00000429526 346 ntBASIC-0.58□□□□□ -2.5
CCDC115Q96NT0 AC087499.7-201ENST00000441958 109 ntBASIC-0.58□□□□□ -2.5
CCDC115Q96NT0 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.58□□□□□ -2.5
CCDC115Q96NT0 RPL17P19-201ENST00000489069 552 ntBASIC-0.58□□□□□ -2.5
CCDC115Q96NT0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.58□□□□□ -2.5
CCDC115Q96NT0 RN7SKP287-201ENST00000516546 266 ntBASIC-0.58□□□□□ -2.5
CCDC115Q96NT0 MIR5589-201ENST00000579442 60 ntBASIC-0.58□□□□□ -2.5
CCDC115Q96NT0 MIR8064-201ENST00000612863 90 ntBASIC-0.58□□□□□ -2.5
CCDC115Q96NT0 uc_338.11-201ENST00000619132 160 ntBASIC-0.58□□□□□ -2.5
CCDC115Q96NT0 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 AC117470.1-201ENST00000381974 330 ntBASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 RNU6-376P-201ENST00000384731 106 ntBASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 MIR454-201ENST00000390180 115 ntBASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 MIR1912-201ENST00000410389 80 ntBASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 AC096531.1-201ENST00000419107 107 ntBASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 MTND1P26-201ENST00000440488 538 ntBASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 RNU7-159P-201ENST00000459284 62 ntBASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 SNORD123-201ENST00000459473 70 ntBASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 AC016550.1-201ENST00000505348 785 ntBASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 RNU6-848P-201ENST00000515948 107 ntBASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 RNU7-129P-201ENST00000516128 62 ntBASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 RNU6-617P-201ENST00000516147 107 ntBASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 RNU6-473P-201ENST00000516164 107 ntBASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 Y_RNA.672-201ENST00000516289 104 ntBASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 AL355375.2-201ENST00000574825 175 ntBASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 AC090897.1-201ENST00000580909 226 ntBASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 AC005771.1-201ENST00000585581 349 ntBASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 AL049777.1-201ENST00000622740 518 ntBASIC-0.59□□□□□ -2.5
CCDC115Q96NT0 Y_RNA.18-201ENST00000362461 102 ntBASIC-0.6□□□□□ -2.51
CCDC115Q96NT0 SNORA18.1-201ENST00000363418 128 ntBASIC-0.6□□□□□ -2.51
CCDC115Q96NT0 SNORA36.1-201ENST00000363424 132 ntBASIC-0.6□□□□□ -2.51
CCDC115Q96NT0 RNU6-660P-201ENST00000364566 109 ntBASIC-0.6□□□□□ -2.51
CCDC115Q96NT0 MIR487A-201ENST00000385009 80 ntBASIC-0.6□□□□□ -2.51
CCDC115Q96NT0 MT-TN-201ENST00000387400 73 ntBASIC-0.6□□□□□ -2.51
CCDC115Q96NT0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.6□□□□□ -2.51
CCDC115Q96NT0 MIR548H2-201ENST00000408874 88 ntBASIC-0.6□□□□□ -2.51
CCDC115Q96NT0 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.6□□□□□ -2.51
CCDC115Q96NT0 AC090572.1-201ENST00000519251 160 ntBASIC-0.6□□□□□ -2.51
CCDC115Q96NT0 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.6□□□□□ -2.51
CCDC115Q96NT0 AC087683.1-201ENST00000591187 441 ntBASIC-0.6□□□□□ -2.51
CCDC115Q96NT0 AC009878.1-201ENST00000621819 340 ntBASIC-0.6□□□□□ -2.51
CCDC115Q96NT0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.6□□□□□ -2.51
CCDC115Q96NT0 AC068137.4-201ENST00000638485 296 ntBASIC-0.6□□□□□ -2.51
CCDC115Q96NT0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.6□□□□□ -2.51
CCDC115Q96NT0 SNORD68-201ENST00000363214 84 ntBASIC-0.61□□□□□ -2.51
CCDC115Q96NT0 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.61□□□□□ -2.51
CCDC115Q96NT0 RNU6-269P-201ENST00000391077 97 ntBASIC-0.61□□□□□ -2.51
CCDC115Q96NT0 MIR938-201ENST00000401216 83 ntBASIC-0.61□□□□□ -2.51
CCDC115Q96NT0 MTCO2P21-201ENST00000419780 677 ntBASIC-0.61□□□□□ -2.51
CCDC115Q96NT0 AC069271.1-201ENST00000445577 156 ntBASIC-0.61□□□□□ -2.51
CCDC115Q96NT0 MTND4P18-201ENST00000447010 465 ntBASIC-0.61□□□□□ -2.51
CCDC115Q96NT0 AC005042.3-201ENST00000453230 174 ntBASIC-0.61□□□□□ -2.51
CCDC115Q96NT0 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.61□□□□□ -2.51
CCDC115Q96NT0 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.61□□□□□ -2.51
CCDC115Q96NT0 AC020891.4-201ENST00000605745 93 ntBASIC-0.61□□□□□ -2.51
CCDC115Q96NT0 SEPT14P19-203ENST00000633205 211 ntBASIC-0.61□□□□□ -2.51
CCDC115Q96NT0 RNU4-92P-201ENST00000363783 136 ntBASIC-0.62□□□□□ -2.51
CCDC115Q96NT0 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.62□□□□□ -2.51
CCDC115Q96NT0 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.62□□□□□ -2.51
CCDC115Q96NT0 AL049545.1-201ENST00000401856 572 ntBASIC-0.62□□□□□ -2.51
CCDC115Q96NT0 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.62□□□□□ -2.51
CCDC115Q96NT0 SCARNA18-201ENST00000459004 134 ntBASIC-0.62□□□□□ -2.51
CCDC115Q96NT0 HSPE1P23-201ENST00000509838 286 ntBASIC-0.62□□□□□ -2.51
CCDC115Q96NT0 RNU6-410P-201ENST00000517006 107 ntBASIC-0.62□□□□□ -2.51
CCDC115Q96NT0 MTND1P35-201ENST00000526739 508 ntBASIC-0.62□□□□□ -2.51
CCDC115Q96NT0 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.62□□□□□ -2.51
CCDC115Q96NT0 Pinc.1-201ENST00000616452 154 ntBASIC-0.62□□□□□ -2.51
CCDC115Q96NT0 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.62□□□□□ -2.51
CCDC115Q96NT0 AC013437.2-201ENST00000639587 677 ntBASIC-0.62□□□□□ -2.51
CCDC115Q96NT0 MTND4P12-201ENST00000498999 1377 ntBASIC-0.62□□□□□ -2.51
CCDC115Q96NT0 SNORD45.3-201ENST00000363836 72 ntBASIC-0.63□□□□□ -2.51
CCDC115Q96NT0 RNA5SP117-201ENST00000365294 118 ntBASIC-0.63□□□□□ -2.51
CCDC115Q96NT0 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.63□□□□□ -2.51
CCDC115Q96NT0 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.63□□□□□ -2.51
CCDC115Q96NT0 RNU6-925P-201ENST00000384629 104 ntBASIC-0.63□□□□□ -2.51
CCDC115Q96NT0 MIR450B-201ENST00000401182 78 ntBASIC-0.63□□□□□ -2.51
CCDC115Q96NT0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.63□□□□□ -2.51
CCDC115Q96NT0 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.63□□□□□ -2.51
CCDC115Q96NT0 RNU6-63P-201ENST00000516690 95 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms