Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 Y_RNA.293-201ENST00000364908 93 ntBASIC2.56□□□□□ -2
PDLIM2Q96JY6 RNU6-1180P-201ENST00000364935 107 ntBASIC2.56□□□□□ -2
PDLIM2Q96JY6 RNA5SP138-201ENST00000365098 114 ntBASIC2.56□□□□□ -2
PDLIM2Q96JY6 CD24P4-201ENST00000382840 243 ntBASIC2.56□□□□□ -2
PDLIM2Q96JY6 RNU6-1083P-201ENST00000384022 107 ntBASIC2.56□□□□□ -2
PDLIM2Q96JY6 MIR586-201ENST00000385035 97 ntBASIC2.56□□□□□ -2
PDLIM2Q96JY6 RNU5E-9P-201ENST00000411164 104 ntBASIC2.56□□□□□ -2
PDLIM2Q96JY6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.56□□□□□ -2
PDLIM2Q96JY6 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.56□□□□□ -2
PDLIM2Q96JY6 MRPS36P2-201ENST00000512569 299 ntBASIC2.56□□□□□ -2
PDLIM2Q96JY6 RNA5SP356-201ENST00000515972 94 ntBASIC2.56□□□□□ -2
PDLIM2Q96JY6 MIR449C-201ENST00000516047 92 ntBASIC2.56□□□□□ -2
PDLIM2Q96JY6 SCARNA17.1-201ENST00000516211 143 ntBASIC2.56□□□□□ -2
PDLIM2Q96JY6 SCARNA17.2-201ENST00000516334 143 ntBASIC2.56□□□□□ -2
PDLIM2Q96JY6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.56□□□□□ -2
PDLIM2Q96JY6 SCARNA17.4-201ENST00000614296 143 ntBASIC2.56□□□□□ -2
PDLIM2Q96JY6 AC013791.1-201ENST00000616619 62 ntBASIC2.56□□□□□ -2
PDLIM2Q96JY6 MIR6766-201ENST00000622641 72 ntBASIC2.56□□□□□ -2
PDLIM2Q96JY6 MIR203B-201ENST00000636080 86 ntBASIC2.56□□□□□ -2
PDLIM2Q96JY6 RNU6-1048P-201ENST00000364054 107 ntBASIC2.55□□□□□ -2
PDLIM2Q96JY6 RNU6-704P-201ENST00000364162 103 ntBASIC2.55□□□□□ -2
PDLIM2Q96JY6 SNORD114-30-201ENST00000364448 72 ntBASIC2.55□□□□□ -2
PDLIM2Q96JY6 Y_RNA.341-201ENST00000365341 102 ntBASIC2.55□□□□□ -2
PDLIM2Q96JY6 SNORD116-18-201ENST00000383961 92 ntBASIC2.55□□□□□ -2
PDLIM2Q96JY6 RNU6-1027P-201ENST00000383998 107 ntBASIC2.55□□□□□ -2
PDLIM2Q96JY6 Y_RNA.412-201ENST00000384001 104 ntBASIC2.55□□□□□ -2
PDLIM2Q96JY6 SNORA72.4-201ENST00000384174 132 ntBASIC2.55□□□□□ -2
PDLIM2Q96JY6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.55□□□□□ -2
PDLIM2Q96JY6 RPL23AP7-203ENST00000449021 469 ntBASIC2.55□□□□□ -2
PDLIM2Q96JY6 AC011753.1-201ENST00000451001 220 ntBASIC2.55□□□□□ -2
PDLIM2Q96JY6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.55□□□□□ -2
PDLIM2Q96JY6 RNU7-14P-201ENST00000459331 62 ntBASIC2.55□□□□□ -2
PDLIM2Q96JY6 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.55□□□□□ -2
PDLIM2Q96JY6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.55□□□□□ -2
PDLIM2Q96JY6 RNA5SP320-201ENST00000516263 124 ntBASIC2.55□□□□□ -2
PDLIM2Q96JY6 AC100767.1-201ENST00000528178 123 ntBASIC2.55□□□□□ -2
PDLIM2Q96JY6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.55□□□□□ -2
PDLIM2Q96JY6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
PDLIM2Q96JY6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PDLIM2Q96JY6 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.54□□□□□ -2
PDLIM2Q96JY6 RNU6-486P-201ENST00000363116 107 ntBASIC2.54□□□□□ -2
PDLIM2Q96JY6 Y_RNA.121-201ENST00000363309 113 ntBASIC2.54□□□□□ -2
PDLIM2Q96JY6 RNU4-10P-201ENST00000364383 140 ntBASIC2.54□□□□□ -2
PDLIM2Q96JY6 RNU6-312P-201ENST00000364629 107 ntBASIC2.54□□□□□ -2
PDLIM2Q96JY6 RNU6-1130P-201ENST00000365434 107 ntBASIC2.54□□□□□ -2
PDLIM2Q96JY6 Y_RNA.357-201ENST00000365487 109 ntBASIC2.54□□□□□ -2
PDLIM2Q96JY6 MIR634-201ENST00000385208 97 ntBASIC2.54□□□□□ -2
PDLIM2Q96JY6 AL359511.1-201ENST00000402970 211 ntBASIC2.54□□□□□ -2
PDLIM2Q96JY6 MIR1294-201ENST00000408503 142 ntBASIC2.54□□□□□ -2
PDLIM2Q96JY6 Y_RNA.797-201ENST00000515977 94 ntBASIC2.54□□□□□ -2
PDLIM2Q96JY6 AC021269.2-201ENST00000532318 330 ntBASIC2.54□□□□□ -2
PDLIM2Q96JY6 MIR4319-201ENST00000577285 85 ntBASIC2.54□□□□□ -2
PDLIM2Q96JY6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.54□□□□□ -2
PDLIM2Q96JY6 AP001485.1-201ENST00000604799 199 ntBASIC2.54□□□□□ -2
PDLIM2Q96JY6 AC110079.1-202ENST00000635213 138 ntBASIC2.54□□□□□ -2
PDLIM2Q96JY6 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
PDLIM2Q96JY6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
PDLIM2Q96JY6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.54□□□□□ -2
PDLIM2Q96JY6 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PDLIM2Q96JY6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PDLIM2Q96JY6 RNU6-899P-201ENST00000363947 107 ntBASIC2.53□□□□□ -2
PDLIM2Q96JY6 Y_RNA.368-201ENST00000365547 113 ntBASIC2.53□□□□□ -2
PDLIM2Q96JY6 Y_RNA.580-201ENST00000391004 95 ntBASIC2.53□□□□□ -2
PDLIM2Q96JY6 MIR548I2-201ENST00000408348 149 ntBASIC2.53□□□□□ -2
PDLIM2Q96JY6 MIR1185-2-201ENST00000408687 86 ntBASIC2.53□□□□□ -2
PDLIM2Q96JY6 SEPT7P4-201ENST00000437076 306 ntBASIC2.53□□□□□ -2
PDLIM2Q96JY6 SNORD109B-201ENST00000458961 67 ntBASIC2.53□□□□□ -2
PDLIM2Q96JY6 SNORD109A-201ENST00000459128 67 ntBASIC2.53□□□□□ -2
PDLIM2Q96JY6 HMGN2P9-201ENST00000476875 229 ntBASIC2.53□□□□□ -2
PDLIM2Q96JY6 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.53□□□□□ -2
PDLIM2Q96JY6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.53□□□□□ -2
PDLIM2Q96JY6 AC026436.1-201ENST00000510537 270 ntBASIC2.53□□□□□ -2
PDLIM2Q96JY6 AC096725.1-201ENST00000514266 313 ntBASIC2.53□□□□□ -2
PDLIM2Q96JY6 SNORA70.12-201ENST00000516084 153 ntBASIC2.53□□□□□ -2
PDLIM2Q96JY6 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.53□□□□□ -2
PDLIM2Q96JY6 AC103810.6-201ENST00000606708 136 ntBASIC2.53□□□□□ -2
PDLIM2Q96JY6 MTND1P7-201ENST00000632801 297 ntBASIC2.53□□□□□ -2
PDLIM2Q96JY6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PDLIM2Q96JY6 AC091564.4-201ENST00000533934 2194 ntBASIC2.53□□□□□ -2
PDLIM2Q96JY6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2.01
PDLIM2Q96JY6 AC068700.1-201ENST00000565862 3754 ntBASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 Y_RNA.23-201ENST00000362496 106 ntBASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 RNU6-859P-201ENST00000362728 107 ntBASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 Y_RNA.75-201ENST00000362927 97 ntBASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 RNA5SP139-201ENST00000364340 117 ntBASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 Y_RNA.310-201ENST00000365063 113 ntBASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 SNORD50.2-201ENST00000365465 70 ntBASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 RNU6-449P-201ENST00000383914 107 ntBASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 Y_RNA.456-201ENST00000384232 111 ntBASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 SNORA8.3-201ENST00000384679 139 ntBASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 RNU6-381P-201ENST00000391259 108 ntBASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 RNU2-52P-201ENST00000410680 190 ntBASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 RPS15AP28-201ENST00000435088 386 ntBASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 RPS29P12-201ENST00000460178 152 ntBASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 RAC1P5-201ENST00000512182 576 ntBASIC2.52□□□□□ -2.01
PDLIM2Q96JY6 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 639.9 ms