Protein–RNA interactions for Protein: Q96H20

SNF8, Vacuolar-sorting protein SNF8, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8Q96H20 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.64□□□□□ -2.31
SNF8Q96H20 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.64□□□□□ -2.31
SNF8Q96H20 AC018710.1-201ENST00000506509 158 ntBASIC0.64□□□□□ -2.31
SNF8Q96H20 RNU7-12P-201ENST00000516030 62 ntBASIC0.64□□□□□ -2.31
SNF8Q96H20 AC090142.3-201ENST00000519012 385 ntBASIC0.64□□□□□ -2.31
SNF8Q96H20 AC134698.4-201ENST00000523451 826 ntBASIC0.64□□□□□ -2.31
SNF8Q96H20 AP002001.1-203ENST00000534002 267 ntBASIC0.64□□□□□ -2.31
SNF8Q96H20 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.64□□□□□ -2.31
SNF8Q96H20 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
SNF8Q96H20 RNU6-222P-201ENST00000362438 107 ntBASIC0.63□□□□□ -2.31
SNF8Q96H20 RNU6-451P-201ENST00000362921 107 ntBASIC0.63□□□□□ -2.31
SNF8Q96H20 RNU6-281P-201ENST00000384212 103 ntBASIC0.63□□□□□ -2.31
SNF8Q96H20 Y_RNA.530-201ENST00000384587 101 ntBASIC0.63□□□□□ -2.31
SNF8Q96H20 MIR508-201ENST00000384857 115 ntBASIC0.63□□□□□ -2.31
SNF8Q96H20 MTCO3P19-201ENST00000415864 321 ntBASIC0.63□□□□□ -2.31
SNF8Q96H20 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.63□□□□□ -2.31
SNF8Q96H20 MTND3P23-201ENST00000431980 347 ntBASIC0.63□□□□□ -2.31
SNF8Q96H20 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.63□□□□□ -2.31
SNF8Q96H20 AC022493.2-201ENST00000506122 481 ntBASIC0.63□□□□□ -2.31
SNF8Q96H20 RNU7-175P-201ENST00000515915 61 ntBASIC0.63□□□□□ -2.31
SNF8Q96H20 RNU2-56P-201ENST00000516826 190 ntBASIC0.63□□□□□ -2.31
SNF8Q96H20 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.63□□□□□ -2.31
SNF8Q96H20 MIR3942-201ENST00000585264 109 ntBASIC0.63□□□□□ -2.31
SNF8Q96H20 AC006435.5-201ENST00000624486 112 ntBASIC0.63□□□□□ -2.31
SNF8Q96H20 MIRLET7C-201ENST00000362160 84 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 Y_RNA.48-201ENST00000362710 103 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 RNU6-1059P-201ENST00000363752 98 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 RNU6-407P-201ENST00000365280 104 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 SNORD116-11-201ENST00000383882 92 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 Y_RNA.414-201ENST00000384011 101 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 MIR608-201ENST00000384820 100 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 MIR499A-201ENST00000384903 122 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
SNF8Q96H20 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
SNF8Q96H20 SNORA75.2-201ENST00000391138 150 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 SNORA75.3-201ENST00000391231 150 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 MIR942-201ENST00000401111 86 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.62□□□□□ -2.31
SNF8Q96H20 RPS3AP1-201ENST00000413190 320 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 ZNF885P-201ENST00000420174 1098 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 MTATP6P17-201ENST00000431030 672 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.62□□□□□ -2.31
SNF8Q96H20 snoU13.25-201ENST00000458945 104 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 TRBVA-201ENST00000498804 316 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 Y_RNA.683-201ENST00000516508 93 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 RNU6-1291P-201ENST00000516591 104 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 RNU6-273P-201ENST00000516937 96 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 RNU6-1116P-201ENST00000517269 99 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 AC133485.1-201ENST00000567176 124 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 AC138907.6-201ENST00000568401 126 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 MIR4273-201ENST00000582824 84 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 AC091178.2-201ENST00000584401 117 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 AC068790.6-201ENST00000602558 258 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 7SK.7-201ENST00000603504 247 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SNF8Q96H20 AC023934.1-201ENST00000574529 2389 ntBASIC0.62□□□□□ -2.31
SNF8Q96H20 Y_RNA.51-201ENST00000362725 102 ntBASIC0.61□□□□□ -2.31
SNF8Q96H20 RNY3P3-201ENST00000363816 102 ntBASIC0.61□□□□□ -2.31
SNF8Q96H20 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
SNF8Q96H20 MIR200A-201ENST00000384875 90 ntBASIC0.61□□□□□ -2.31
SNF8Q96H20 RPL39P39-201ENST00000455840 151 ntBASIC0.61□□□□□ -2.31
SNF8Q96H20 RNU7-21P-201ENST00000459430 62 ntBASIC0.61□□□□□ -2.31
SNF8Q96H20 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.61□□□□□ -2.31
SNF8Q96H20 RNA5SP20-201ENST00000515976 84 ntBASIC0.61□□□□□ -2.31
SNF8Q96H20 RNU6-341P-201ENST00000516973 96 ntBASIC0.61□□□□□ -2.31
SNF8Q96H20 AC026407.1-201ENST00000518369 204 ntBASIC0.61□□□□□ -2.31
SNF8Q96H20 AC093023.1-201ENST00000547375 507 ntBASIC0.61□□□□□ -2.31
SNF8Q96H20 RPL21P9-201ENST00000556149 474 ntBASIC0.61□□□□□ -2.31
SNF8Q96H20 NBR2-204ENST00000587322 63 ntBASIC0.61□□□□□ -2.31
SNF8Q96H20 PRELID3BP2-201ENST00000605362 201 ntBASIC0.61□□□□□ -2.31
SNF8Q96H20 AL096861.1-201ENST00000610899 123 ntBASIC0.61□□□□□ -2.31
SNF8Q96H20 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.61□□□□□ -2.31
SNF8Q96H20 AC068137.4-201ENST00000638485 296 ntBASIC0.61□□□□□ -2.31
SNF8Q96H20 RNA5SP361-201ENST00000362686 118 ntBASIC0.6□□□□□ -2.31
SNF8Q96H20 Y_RNA.106-201ENST00000363189 100 ntBASIC0.6□□□□□ -2.31
SNF8Q96H20 RNU5F-3P-201ENST00000363767 117 ntBASIC0.6□□□□□ -2.31
SNF8Q96H20 RNU6-1090P-201ENST00000364065 94 ntBASIC0.6□□□□□ -2.31
SNF8Q96H20 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.6□□□□□ -2.31
SNF8Q96H20 SNORD116-1-201ENST00000384335 95 ntBASIC0.6□□□□□ -2.31
SNF8Q96H20 RNU6-1001P-201ENST00000411265 100 ntBASIC0.6□□□□□ -2.31
SNF8Q96H20 AC018865.2-201ENST00000423631 129 ntBASIC0.6□□□□□ -2.31
SNF8Q96H20 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.6□□□□□ -2.31
SNF8Q96H20 AP003484.1-201ENST00000530974 250 ntBASIC0.6□□□□□ -2.31
SNF8Q96H20 AC004812.1-201ENST00000540773 146 ntBASIC0.6□□□□□ -2.31
SNF8Q96H20 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.6□□□□□ -2.31
SNF8Q96H20 AL357312.1-201ENST00000603879 298 ntBASIC0.6□□□□□ -2.31
SNF8Q96H20 AC024614.3-201ENST00000637860 256 ntBASIC0.6□□□□□ -2.31
SNF8Q96H20 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
SNF8Q96H20 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
SNF8Q96H20 RNU6-595P-201ENST00000363944 107 ntBASIC0.59□□□□□ -2.31
SNF8Q96H20 RNU6-136P-201ENST00000384663 107 ntBASIC0.59□□□□□ -2.31
SNF8Q96H20 RNU6-376P-201ENST00000384731 106 ntBASIC0.59□□□□□ -2.31
SNF8Q96H20 MIR526A1-201ENST00000384897 85 ntBASIC0.59□□□□□ -2.31
SNF8Q96H20 MIR548J-201ENST00000408833 112 ntBASIC0.59□□□□□ -2.31
SNF8Q96H20 ELOCP21-201ENST00000412558 336 ntBASIC0.59□□□□□ -2.31
SNF8Q96H20 USP9YP16-201ENST00000430287 407 ntBASIC0.59□□□□□ -2.31
SNF8Q96H20 Z98949.2-201ENST00000440996 144 ntBASIC0.59□□□□□ -2.31
SNF8Q96H20 USP9YP23-201ENST00000455085 407 ntBASIC0.59□□□□□ -2.31
SNF8Q96H20 LINC01399-202ENST00000458450 244 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 205.3 ms