Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 SNORD114-7-201ENST00000362520 77 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 Y_RNA.238-201ENST00000364441 102 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 RNU6-418P-201ENST00000384035 107 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 RNU2-2P-201ENST00000410396 191 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 RNU7-141P-201ENST00000459304 62 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 SNORA59A-201ENST00000459326 152 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 AC080013.2-201ENST00000460866 323 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 AC091021.1-201ENST00000468051 388 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 RNA5SP282-201ENST00000516355 108 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 SNORA31.11-201ENST00000516528 139 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 RPPH1-2P-201ENST00000516688 293 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.52□□□□□ -2.01
PTCD3Q96EY7 PRELID2P1-201ENST00000552837 301 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.52□□□□□ -2.01
PTCD3Q96EY7 AC090616.3-201ENST00000582184 217 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 RNU2-4P-201ENST00000606190 192 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 U2.15-201ENST00000611544 191 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 U2.16-201ENST00000613119 191 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 U2.12-201ENST00000613778 191 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 U2.9-201ENST00000615427 191 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 U2.11-201ENST00000616345 191 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 U2.2-201ENST00000616535 191 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 U2.3-201ENST00000617785 191 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 U2.19-201ENST00000618602 191 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 RNU2-1-201ENST00000618664 191 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 U2.6-201ENST00000619225 191 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 U2.5-201ENST00000619465 191 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 U2.10-201ENST00000620268 191 ntBASIC2.52□□□□□ -2.01
PTCD3Q96EY7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
PTCD3Q96EY7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.52□□□□□ -2.01
PTCD3Q96EY7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
PTCD3Q96EY7 RNU6-859P-201ENST00000362728 107 ntBASIC2.51□□□□□ -2.01
PTCD3Q96EY7 RNU1-23P-201ENST00000363361 144 ntBASIC2.51□□□□□ -2.01
PTCD3Q96EY7 Y_RNA.572-201ENST00000384757 98 ntBASIC2.51□□□□□ -2.01
PTCD3Q96EY7 MIR626-201ENST00000385032 94 ntBASIC2.51□□□□□ -2.01
PTCD3Q96EY7 AL355497.1-201ENST00000406262 551 ntBASIC2.51□□□□□ -2.01
PTCD3Q96EY7 RNU2-48P-201ENST00000410694 191 ntBASIC2.51□□□□□ -2.01
PTCD3Q96EY7 COTL1P1-201ENST00000422309 375 ntBASIC2.51□□□□□ -2.01
PTCD3Q96EY7 RPL23AP7-203ENST00000449021 469 ntBASIC2.51□□□□□ -2.01
PTCD3Q96EY7 AC096725.1-201ENST00000514266 313 ntBASIC2.51□□□□□ -2.01
PTCD3Q96EY7 RN7SKP132-201ENST00000516001 208 ntBASIC2.51□□□□□ -2.01
PTCD3Q96EY7 RNU7-200P-201ENST00000516105 62 ntBASIC2.51□□□□□ -2.01
PTCD3Q96EY7 RNU6-789P-201ENST00000517105 102 ntBASIC2.51□□□□□ -2.01
PTCD3Q96EY7 AC021269.2-201ENST00000532318 330 ntBASIC2.51□□□□□ -2.01
PTCD3Q96EY7 GTF3AP2-201ENST00000557014 266 ntBASIC2.51□□□□□ -2.01
PTCD3Q96EY7 MIR3684-201ENST00000579779 74 ntBASIC2.51□□□□□ -2.01
PTCD3Q96EY7 MIR3910-1-201ENST00000580936 111 ntBASIC2.51□□□□□ -2.01
PTCD3Q96EY7 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.51□□□□□ -2.01
PTCD3Q96EY7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PTCD3Q96EY7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
PTCD3Q96EY7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.51□□□□□ -2.01
PTCD3Q96EY7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PTCD3Q96EY7 AL159152.1-201ENST00000635019 2587 ntBASIC2.51□□□□□ -2.01
PTCD3Q96EY7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PTCD3Q96EY7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
PTCD3Q96EY7 SNORA27.1-201ENST00000362604 124 ntBASIC2.5□□□□□ -2.01
PTCD3Q96EY7 RNA5SP393-201ENST00000363423 117 ntBASIC2.5□□□□□ -2.01
PTCD3Q96EY7 RNU6-899P-201ENST00000363947 107 ntBASIC2.5□□□□□ -2.01
PTCD3Q96EY7 snoU2_19.4-201ENST00000364329 80 ntBASIC2.5□□□□□ -2.01
PTCD3Q96EY7 RNU4-17P-201ENST00000365598 141 ntBASIC2.5□□□□□ -2.01
PTCD3Q96EY7 Y_RNA.412-201ENST00000384001 104 ntBASIC2.5□□□□□ -2.01
PTCD3Q96EY7 RNU6-381P-201ENST00000391259 108 ntBASIC2.5□□□□□ -2.01
PTCD3Q96EY7 MIR873-201ENST00000401120 77 ntBASIC2.5□□□□□ -2.01
PTCD3Q96EY7 SNORA11.2-201ENST00000408318 127 ntBASIC2.5□□□□□ -2.01
PTCD3Q96EY7 RNU2-32P-201ENST00000411193 191 ntBASIC2.5□□□□□ -2.01
PTCD3Q96EY7 RNU6-57P-201ENST00000411348 103 ntBASIC2.5□□□□□ -2.01
PTCD3Q96EY7 AL161788.1-201ENST00000441805 169 ntBASIC2.5□□□□□ -2.01
PTCD3Q96EY7 SNORA70.12-201ENST00000516084 153 ntBASIC2.5□□□□□ -2.01
PTCD3Q96EY7 RNU6-346P-201ENST00000516288 111 ntBASIC2.5□□□□□ -2.01
PTCD3Q96EY7 AC025647.1-201ENST00000517879 253 ntBASIC2.5□□□□□ -2.01
PTCD3Q96EY7 AC022616.8-201ENST00000533569 253 ntBASIC2.5□□□□□ -2.01
PTCD3Q96EY7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.5□□□□□ -2.01
PTCD3Q96EY7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.5□□□□□ -2.01
PTCD3Q96EY7 LARP7P3-201ENST00000579888 337 ntBASIC2.5□□□□□ -2.01
PTCD3Q96EY7 MIR5739-201ENST00000619803 80 ntBASIC2.5□□□□□ -2.01
PTCD3Q96EY7 U2.22-201ENST00000636441 106 ntBASIC2.5□□□□□ -2.01
PTCD3Q96EY7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
PTCD3Q96EY7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PTCD3Q96EY7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
PTCD3Q96EY7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PTCD3Q96EY7 Y_RNA.8-201ENST00000362353 102 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 Y_RNA.121-201ENST00000363309 113 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 U8.7-201ENST00000364940 136 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 Y_RNA.398-201ENST00000383952 99 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 RNU6-546P-201ENST00000383991 107 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 SNORD116-13-201ENST00000384408 92 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 SNORA80E-201ENST00000384744 137 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 SNORA40.19-201ENST00000390846 128 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 AC016909.1-201ENST00000415916 166 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 AC092427.1-202ENST00000430569 476 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 RPS20P10-201ENST00000451209 253 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 SNORD109B-201ENST00000458961 67 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 SNORD109A-201ENST00000459128 67 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 AC114982.1-201ENST00000469402 321 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 AL049873.1-201ENST00000480540 376 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.49□□□□□ -2.01
PTCD3Q96EY7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.49□□□□□ -2.01
PTCD3Q96EY7 AC023141.11-201ENST00000508864 202 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 AC010598.1-201ENST00000510378 103 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 RNU6-948P-201ENST00000516374 107 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms