Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.86□□□□□ -1.95
CHFRQ96EP1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CHFRQ96EP1 AC092268.1-201ENST00000342691 405 ntBASIC2.85□□□□□ -1.95
CHFRQ96EP1 RNU5F-3P-201ENST00000363767 117 ntBASIC2.85□□□□□ -1.95
CHFRQ96EP1 SNORD115-30-201ENST00000364117 82 ntBASIC2.85□□□□□ -1.95
CHFRQ96EP1 U8.7-201ENST00000364940 136 ntBASIC2.85□□□□□ -1.95
CHFRQ96EP1 RNU6-217P-201ENST00000384164 104 ntBASIC2.85□□□□□ -1.95
CHFRQ96EP1 RNA5SP21-201ENST00000410917 96 ntBASIC2.85□□□□□ -1.95
CHFRQ96EP1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CHFRQ96EP1 AC244670.1-201ENST00000436879 112 ntBASIC2.85□□□□□ -1.95
CHFRQ96EP1 HSPE1P13-201ENST00000451143 297 ntBASIC2.85□□□□□ -1.95
CHFRQ96EP1 MTATP6P7-201ENST00000453315 681 ntBASIC2.85□□□□□ -1.95
CHFRQ96EP1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.85□□□□□ -1.95
CHFRQ96EP1 AC091544.4-201ENST00000555268 342 ntBASIC2.85□□□□□ -1.95
CHFRQ96EP1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.85□□□□□ -1.95
CHFRQ96EP1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.85□□□□□ -1.95
CHFRQ96EP1 MIR3117-201ENST00000584034 78 ntBASIC2.85□□□□□ -1.95
CHFRQ96EP1 AC006380.1-201ENST00000603598 186 ntBASIC2.85□□□□□ -1.95
CHFRQ96EP1 FTX_3.1-201ENST00000610451 147 ntBASIC2.85□□□□□ -1.95
CHFRQ96EP1 MIR6134-201ENST00000617606 109 ntBASIC2.85□□□□□ -1.95
CHFRQ96EP1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CHFRQ96EP1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.84□□□□□ -1.95
CHFRQ96EP1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.84□□□□□ -1.95
CHFRQ96EP1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CHFRQ96EP1 RNU6-859P-201ENST00000362728 107 ntBASIC2.84□□□□□ -1.95
CHFRQ96EP1 RNU6-245P-201ENST00000384020 107 ntBASIC2.84□□□□□ -1.95
CHFRQ96EP1 MIR526A2-201ENST00000390198 65 ntBASIC2.84□□□□□ -1.95
CHFRQ96EP1 AL031003.1-201ENST00000404229 172 ntBASIC2.84□□□□□ -1.95
CHFRQ96EP1 BPY2DP-201ENST00000422208 265 ntBASIC2.84□□□□□ -1.95
CHFRQ96EP1 AIMP1P2-201ENST00000425294 312 ntBASIC2.84□□□□□ -1.95
CHFRQ96EP1 AL445687.1-201ENST00000439946 251 ntBASIC2.84□□□□□ -1.95
CHFRQ96EP1 RNU6-772P-201ENST00000516042 105 ntBASIC2.84□□□□□ -1.95
CHFRQ96EP1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.84□□□□□ -1.95
CHFRQ96EP1 MIR3616-201ENST00000584070 92 ntBASIC2.84□□□□□ -1.95
CHFRQ96EP1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CHFRQ96EP1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CHFRQ96EP1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.84□□□□□ -1.95
CHFRQ96EP1 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
CHFRQ96EP1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.84□□□□□ -1.96
CHFRQ96EP1 AC108206.1-201ENST00000570186 4159 ntBASIC2.83□□□□□ -1.96
CHFRQ96EP1 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
CHFRQ96EP1 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CHFRQ96EP1 RNU1-62P-201ENST00000362599 164 ntBASIC2.83□□□□□ -1.96
CHFRQ96EP1 Y_RNA.229-201ENST00000364347 113 ntBASIC2.83□□□□□ -1.96
CHFRQ96EP1 RNU6-1082P-201ENST00000364574 107 ntBASIC2.83□□□□□ -1.96
CHFRQ96EP1 Y_RNA.280-201ENST00000364765 112 ntBASIC2.83□□□□□ -1.96
CHFRQ96EP1 Y_RNA.393-201ENST00000383936 102 ntBASIC2.83□□□□□ -1.96
CHFRQ96EP1 Y_RNA.415-201ENST00000384012 112 ntBASIC2.83□□□□□ -1.96
CHFRQ96EP1 AL606845.1-201ENST00000404881 255 ntBASIC2.83□□□□□ -1.96
CHFRQ96EP1 Y_RNA.630-201ENST00000411370 108 ntBASIC2.83□□□□□ -1.96
CHFRQ96EP1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.83□□□□□ -1.96
CHFRQ96EP1 RNU1-41P-201ENST00000516161 162 ntBASIC2.83□□□□□ -1.96
CHFRQ96EP1 SNORD33.1-201ENST00000516213 88 ntBASIC2.83□□□□□ -1.96
CHFRQ96EP1 RNU1-48P-201ENST00000516400 162 ntBASIC2.83□□□□□ -1.96
CHFRQ96EP1 NDUFA5P6-201ENST00000542110 379 ntBASIC2.83□□□□□ -1.96
CHFRQ96EP1 MIR4435-1-201ENST00000582552 80 ntBASIC2.83□□□□□ -1.96
CHFRQ96EP1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.83□□□□□ -1.96
CHFRQ96EP1 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CHFRQ96EP1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CHFRQ96EP1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CHFRQ96EP1 SNORA38-201ENST00000363946 132 ntBASIC2.82□□□□□ -1.96
CHFRQ96EP1 RNU6-461P-201ENST00000364195 107 ntBASIC2.82□□□□□ -1.96
CHFRQ96EP1 RNU6-1164P-201ENST00000364428 107 ntBASIC2.82□□□□□ -1.96
CHFRQ96EP1 RNU6-1264P-201ENST00000383891 107 ntBASIC2.82□□□□□ -1.96
CHFRQ96EP1 RNU1-73P-201ENST00000383971 164 ntBASIC2.82□□□□□ -1.96
CHFRQ96EP1 AL512604.1-201ENST00000404812 257 ntBASIC2.82□□□□□ -1.96
CHFRQ96EP1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.82□□□□□ -1.96
CHFRQ96EP1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
CHFRQ96EP1 AC090525.1-201ENST00000479116 478 ntBASIC2.82□□□□□ -1.96
CHFRQ96EP1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.82□□□□□ -1.96
CHFRQ96EP1 Y_RNA.694-201ENST00000516677 117 ntBASIC2.82□□□□□ -1.96
CHFRQ96EP1 AC109329.2-201ENST00000519658 482 ntBASIC2.82□□□□□ -1.96
CHFRQ96EP1 CKS1BP7-201ENST00000522230 235 ntBASIC2.82□□□□□ -1.96
CHFRQ96EP1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.82□□□□□ -1.96
CHFRQ96EP1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.82□□□□□ -1.96
CHFRQ96EP1 MIR5194-201ENST00000582634 120 ntBASIC2.82□□□□□ -1.96
CHFRQ96EP1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.82□□□□□ -1.96
CHFRQ96EP1 AL449363.1-201ENST00000617815 186 ntBASIC2.82□□□□□ -1.96
CHFRQ96EP1 snoZ196.1-201ENST00000625269 89 ntBASIC2.82□□□□□ -1.96
CHFRQ96EP1 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.82□□□□□ -1.96
CHFRQ96EP1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.81□□□□□ -1.96
CHFRQ96EP1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CHFRQ96EP1 CENPCP1-201ENST00000533085 2578 ntBASIC2.81□□□□□ -1.96
CHFRQ96EP1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CHFRQ96EP1 RNA5SP68-201ENST00000363885 119 ntBASIC2.81□□□□□ -1.96
CHFRQ96EP1 SNORA68.1-201ENST00000364537 132 ntBASIC2.81□□□□□ -1.96
CHFRQ96EP1 Y_RNA.310-201ENST00000365063 113 ntBASIC2.81□□□□□ -1.96
CHFRQ96EP1 Y_RNA.368-201ENST00000365547 113 ntBASIC2.81□□□□□ -1.96
CHFRQ96EP1 Y_RNA.521-201ENST00000384560 114 ntBASIC2.81□□□□□ -1.96
CHFRQ96EP1 RNU6-1228P-201ENST00000391014 107 ntBASIC2.81□□□□□ -1.96
CHFRQ96EP1 SNORA75.5-201ENST00000391291 81 ntBASIC2.81□□□□□ -1.96
CHFRQ96EP1 AC019205.3-201ENST00000424573 156 ntBASIC2.81□□□□□ -1.96
CHFRQ96EP1 MTCO1P44-201ENST00000441935 243 ntBASIC2.81□□□□□ -1.96
CHFRQ96EP1 RPS27P1-201ENST00000450552 247 ntBASIC2.81□□□□□ -1.96
CHFRQ96EP1 RPL26P9-201ENST00000457466 433 ntBASIC2.81□□□□□ -1.96
CHFRQ96EP1 RNU7-141P-201ENST00000459304 62 ntBASIC2.81□□□□□ -1.96
CHFRQ96EP1 MIR3121-201ENST00000579680 77 ntBASIC2.81□□□□□ -1.96
CHFRQ96EP1 MIR7515-201ENST00000637837 67 ntBASIC2.81□□□□□ -1.96
CHFRQ96EP1 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
CHFRQ96EP1 ADAM3A-203ENST00000461344 2157 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms