Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.48□□□□□ -2.17
SNRNP40Q96DI7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
SNRNP40Q96DI7 MIR559-201ENST00000385188 96 ntBASIC1.47□□□□□ -2.17
SNRNP40Q96DI7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.47□□□□□ -2.17
SNRNP40Q96DI7 Y_RNA.632-201ENST00000459189 102 ntBASIC1.47□□□□□ -2.17
SNRNP40Q96DI7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.47□□□□□ -2.17
SNRNP40Q96DI7 RPS26P55-201ENST00000471178 356 ntBASIC1.47□□□□□ -2.17
SNRNP40Q96DI7 RPS27P22-201ENST00000478056 241 ntBASIC1.47□□□□□ -2.17
SNRNP40Q96DI7 RNU6-470P-201ENST00000515954 104 ntBASIC1.47□□□□□ -2.17
SNRNP40Q96DI7 MIR2355-201ENST00000517199 87 ntBASIC1.47□□□□□ -2.17
SNRNP40Q96DI7 AC091144.1-201ENST00000519573 138 ntBASIC1.47□□□□□ -2.17
SNRNP40Q96DI7 MIR3618-201ENST00000580330 88 ntBASIC1.47□□□□□ -2.17
SNRNP40Q96DI7 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
SNRNP40Q96DI7 MIR1244-1-201ENST00000612829 85 ntBASIC1.47□□□□□ -2.17
SNRNP40Q96DI7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.47□□□□□ -2.17
SNRNP40Q96DI7 AC087588.2-201ENST00000617667 426 ntBASIC1.47□□□□□ -2.17
SNRNP40Q96DI7 AC095038.3-201ENST00000634439 195 ntBASIC1.47□□□□□ -2.17
SNRNP40Q96DI7 MIR1244-3-201ENST00000635744 85 ntBASIC1.47□□□□□ -2.17
SNRNP40Q96DI7 MIR1244-2-201ENST00000636449 85 ntBASIC1.47□□□□□ -2.17
SNRNP40Q96DI7 MIR1244-4-202ENST00000636813 85 ntBASIC1.47□□□□□ -2.17
SNRNP40Q96DI7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SNRNP40Q96DI7 RNA5SP361-201ENST00000362686 118 ntBASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 Y_RNA.224-201ENST00000364308 111 ntBASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 Y_RNA.259-201ENST00000364619 101 ntBASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 RNU6-392P-201ENST00000364926 101 ntBASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 SNORD1A-201ENST00000364968 72 ntBASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 Y_RNA.358-201ENST00000365491 99 ntBASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 RNU6-203P-201ENST00000384038 104 ntBASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 RNU6-318P-201ENST00000384283 103 ntBASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 MIR489-201ENST00000384923 84 ntBASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 RPL21P1-201ENST00000399532 476 ntBASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 MRPL35P1-201ENST00000404272 572 ntBASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 RN7SKP200-201ENST00000410564 320 ntBASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 AL161935.2-201ENST00000414627 60 ntBASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 RPL30P15-201ENST00000457129 321 ntBASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 RNU1-98P-201ENST00000458992 160 ntBASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 SNORD19B-201ENST00000459623 84 ntBASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 RN7SKP49-201ENST00000516675 260 ntBASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 AC022868.1-201ENST00000517767 391 ntBASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 AC019176.1-201ENST00000518519 225 ntBASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 MIR4438-201ENST00000585271 93 ntBASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 AL121890.5-201ENST00000620848 304 ntBASIC1.46□□□□□ -2.18
SNRNP40Q96DI7 RNU6-1040P-201ENST00000383974 107 ntBASIC1.45□□□□□ -2.18
SNRNP40Q96DI7 RNU6-1065P-201ENST00000384513 106 ntBASIC1.45□□□□□ -2.18
SNRNP40Q96DI7 MIR625-201ENST00000385047 85 ntBASIC1.45□□□□□ -2.18
SNRNP40Q96DI7 SNORA67.6-201ENST00000391093 99 ntBASIC1.45□□□□□ -2.18
SNRNP40Q96DI7 MIR1276-201ENST00000408707 83 ntBASIC1.45□□□□□ -2.18
SNRNP40Q96DI7 RNU6-1156P-201ENST00000410365 100 ntBASIC1.45□□□□□ -2.18
SNRNP40Q96DI7 AC005002.2-201ENST00000438228 269 ntBASIC1.45□□□□□ -2.18
SNRNP40Q96DI7 MIR2053-201ENST00000459295 91 ntBASIC1.45□□□□□ -2.18
SNRNP40Q96DI7 RNU7-94P-201ENST00000459576 63 ntBASIC1.45□□□□□ -2.18
SNRNP40Q96DI7 AC074133.1-201ENST00000515696 183 ntBASIC1.45□□□□□ -2.18
SNRNP40Q96DI7 RNU7-99P-201ENST00000516271 62 ntBASIC1.45□□□□□ -2.18
SNRNP40Q96DI7 RNU6-264P-201ENST00000517134 104 ntBASIC1.45□□□□□ -2.18
SNRNP40Q96DI7 AC093027.1-201ENST00000546698 429 ntBASIC1.45□□□□□ -2.18
SNRNP40Q96DI7 MIR3122-201ENST00000577243 73 ntBASIC1.45□□□□□ -2.18
SNRNP40Q96DI7 AL929325.1-201ENST00000603096 117 ntBASIC1.45□□□□□ -2.18
SNRNP40Q96DI7 AL357075.2-201ENST00000614906 189 ntBASIC1.45□□□□□ -2.18
SNRNP40Q96DI7 U6.73-201ENST00000619194 103 ntBASIC1.45□□□□□ -2.18
SNRNP40Q96DI7 AC112487.2-201ENST00000637950 304 ntBASIC1.45□□□□□ -2.18
SNRNP40Q96DI7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SNRNP40Q96DI7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.44□□□□□ -2.18
SNRNP40Q96DI7 AC073544.1-201ENST00000600110 1595 ntBASIC1.44□□□□□ -2.18
SNRNP40Q96DI7 MIR410-201ENST00000362222 80 ntBASIC1.44□□□□□ -2.18
SNRNP40Q96DI7 SNORA7.1-201ENST00000363750 139 ntBASIC1.44□□□□□ -2.18
SNRNP40Q96DI7 Y_RNA.498-201ENST00000384460 102 ntBASIC1.44□□□□□ -2.18
SNRNP40Q96DI7 RNU11-5P-201ENST00000391216 129 ntBASIC1.44□□□□□ -2.18
SNRNP40Q96DI7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.44□□□□□ -2.18
SNRNP40Q96DI7 Y_RNA.592-201ENST00000410274 109 ntBASIC1.44□□□□□ -2.18
SNRNP40Q96DI7 ELOCP21-201ENST00000412558 336 ntBASIC1.44□□□□□ -2.18
SNRNP40Q96DI7 AF228730.4-201ENST00000421457 183 ntBASIC1.44□□□□□ -2.18
SNRNP40Q96DI7 MTND4LP11-201ENST00000422184 280 ntBASIC1.44□□□□□ -2.18
SNRNP40Q96DI7 AC010154.1-201ENST00000425857 269 ntBASIC1.44□□□□□ -2.18
SNRNP40Q96DI7 AC245047.3-201ENST00000429428 127 ntBASIC1.44□□□□□ -2.18
SNRNP40Q96DI7 AC010598.1-201ENST00000510378 103 ntBASIC1.44□□□□□ -2.18
SNRNP40Q96DI7 MTND3P22-201ENST00000510932 243 ntBASIC1.44□□□□□ -2.18
SNRNP40Q96DI7 RNU7-4P-201ENST00000516961 62 ntBASIC1.44□□□□□ -2.18
SNRNP40Q96DI7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.44□□□□□ -2.18
SNRNP40Q96DI7 AC015720.1-201ENST00000565251 277 ntBASIC1.44□□□□□ -2.18
SNRNP40Q96DI7 AC024614.2-201ENST00000577584 372 ntBASIC1.44□□□□□ -2.18
SNRNP40Q96DI7 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.44□□□□□ -2.18
SNRNP40Q96DI7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 RNU6-1301P-201ENST00000362724 104 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 RNU6-490P-201ENST00000362985 107 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 Y_RNA.356-201ENST00000365475 113 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 RNA5SP259-201ENST00000365541 109 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 RNU6-1264P-201ENST00000383891 107 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 MIR513A1-201ENST00000385138 129 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 SNORA69.1-201ENST00000390904 137 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 MTCO2P27-201ENST00000420740 428 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 MRPS18CP6-201ENST00000423587 223 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 MTND4P28-201ENST00000426217 387 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 AL135790.2-201ENST00000437701 267 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 SNORD65B-201ENST00000459126 73 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 snoU13.18-201ENST00000459483 104 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 AC010469.2-201ENST00000496412 480 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms