Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNU6-855P-201ENST00000410395 104 ntBASIC2.29□□□□□ -2.04
CTHRC1Q96CG8 RN7SKP284-201ENST00000411002 343 ntBASIC2.29□□□□□ -2.04
CTHRC1Q96CG8 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.29□□□□□ -2.04
CTHRC1Q96CG8 RNA5SP20-201ENST00000515976 84 ntBASIC2.29□□□□□ -2.04
CTHRC1Q96CG8 AC136628.3-201ENST00000521868 290 ntBASIC2.29□□□□□ -2.04
CTHRC1Q96CG8 AC009779.6-201ENST00000603972 165 ntBASIC2.29□□□□□ -2.04
CTHRC1Q96CG8 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.29□□□□□ -2.04
CTHRC1Q96CG8 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.29□□□□□ -2.04
CTHRC1Q96CG8 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.28□□□□□ -2.04
CTHRC1Q96CG8 Y_RNA.200-201ENST00000364018 102 ntBASIC2.28□□□□□ -2.04
CTHRC1Q96CG8 Y_RNA.217-201ENST00000364214 105 ntBASIC2.28□□□□□ -2.04
CTHRC1Q96CG8 RPL23AP7-203ENST00000449021 469 ntBASIC2.28□□□□□ -2.04
CTHRC1Q96CG8 HSPE1P13-201ENST00000451143 297 ntBASIC2.28□□□□□ -2.04
CTHRC1Q96CG8 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.28□□□□□ -2.04
CTHRC1Q96CG8 RNU1-131P-201ENST00000458943 161 ntBASIC2.28□□□□□ -2.04
CTHRC1Q96CG8 Y_RNA.638-201ENST00000459374 113 ntBASIC2.28□□□□□ -2.04
CTHRC1Q96CG8 Y_RNA.641-201ENST00000459414 105 ntBASIC2.28□□□□□ -2.04
CTHRC1Q96CG8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.28□□□□□ -2.04
CTHRC1Q96CG8 MIR4282-201ENST00000583613 67 ntBASIC2.28□□□□□ -2.04
CTHRC1Q96CG8 AL442067.1-201ENST00000613261 223 ntBASIC2.28□□□□□ -2.04
CTHRC1Q96CG8 AC073349.3-201ENST00000617616 186 ntBASIC2.28□□□□□ -2.04
CTHRC1Q96CG8 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CTHRC1Q96CG8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.05
CTHRC1Q96CG8 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.28□□□□□ -2.05
CTHRC1Q96CG8 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.05
CTHRC1Q96CG8 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CTHRC1Q96CG8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CTHRC1Q96CG8 CENPCP1-201ENST00000533085 2578 ntBASIC2.27□□□□□ -2.05
CTHRC1Q96CG8 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.27□□□□□ -2.05
CTHRC1Q96CG8 MIR6073-201ENST00000352083 89 ntBASIC2.27□□□□□ -2.05
CTHRC1Q96CG8 Y_RNA.76-201ENST00000362931 109 ntBASIC2.27□□□□□ -2.05
CTHRC1Q96CG8 RNU6-200P-201ENST00000364743 107 ntBASIC2.27□□□□□ -2.05
CTHRC1Q96CG8 Y_RNA.292-201ENST00000364904 97 ntBASIC2.27□□□□□ -2.05
CTHRC1Q96CG8 Y_RNA.368-201ENST00000365547 113 ntBASIC2.27□□□□□ -2.05
CTHRC1Q96CG8 SNORA40.19-201ENST00000390846 128 ntBASIC2.27□□□□□ -2.05
CTHRC1Q96CG8 RPS27P22-201ENST00000478056 241 ntBASIC2.27□□□□□ -2.05
CTHRC1Q96CG8 SUMO2P18-201ENST00000518873 252 ntBASIC2.27□□□□□ -2.05
CTHRC1Q96CG8 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.27□□□□□ -2.05
CTHRC1Q96CG8 AL137100.2-201ENST00000555786 315 ntBASIC2.27□□□□□ -2.05
CTHRC1Q96CG8 AC067747.1-201ENST00000608026 250 ntBASIC2.27□□□□□ -2.05
CTHRC1Q96CG8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.27□□□□□ -2.05
CTHRC1Q96CG8 snoU18.1-201ENST00000629629 71 ntBASIC2.27□□□□□ -2.05
CTHRC1Q96CG8 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CTHRC1Q96CG8 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 Y_RNA.199-201ENST00000364014 102 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 RNU6-907P-201ENST00000390924 102 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 MIR1262-201ENST00000408276 93 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 MIR1298-201ENST00000408783 112 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 AC060773.1-201ENST00000421698 310 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 BTF3P11-201ENST00000426582 477 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 CR769767.1-201ENST00000436337 346 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 COX6CP14-201ENST00000469580 174 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 RPS26P55-201ENST00000471178 356 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 MIR4658-201ENST00000584344 65 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 U2.15-201ENST00000611544 191 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 U2.16-201ENST00000613119 191 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 U2.12-201ENST00000613778 191 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 U2.20-201ENST00000613956 192 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 U2.9-201ENST00000615427 191 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 U2.11-201ENST00000616345 191 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 U2.2-201ENST00000616535 191 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 U2.3-201ENST00000617785 191 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 U2.19-201ENST00000618602 191 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 RNU2-1-201ENST00000618664 191 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 U2.6-201ENST00000619225 191 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 U2.5-201ENST00000619465 191 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 U2.10-201ENST00000620268 191 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 MIR1291-201ENST00000627649 87 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 CTSLP2-204ENST00000629029 392 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 ZNF271P-202ENST00000465539 1970 ntBASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.26□□□□□ -2.05
CTHRC1Q96CG8 AC245060.5-201ENST00000610778 3293 ntBASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 MIR340-201ENST00000362125 95 ntBASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 RNU6-1272P-201ENST00000362776 107 ntBASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 Y_RNA.83-201ENST00000363005 113 ntBASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 Y_RNA.124-201ENST00000363339 93 ntBASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 Y_RNA.287-201ENST00000364853 94 ntBASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 DEFA7P-201ENST00000382676 285 ntBASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 RNU6-211P-201ENST00000384047 107 ntBASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 MIR29C-201ENST00000385231 88 ntBASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 RNU6-651P-201ENST00000411040 105 ntBASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 RNU2-14P-201ENST00000411053 191 ntBASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 AL139156.1-201ENST00000412785 841 ntBASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 AC016909.1-201ENST00000415916 166 ntBASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 OOSP1P1-201ENST00000423265 274 ntBASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 HMGN2P34-201ENST00000437647 269 ntBASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 SNORD2.1-201ENST00000458762 69 ntBASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 AC011406.1-201ENST00000512440 370 ntBASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 RNU6-1337P-201ENST00000516525 95 ntBASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 Y_RNA.700-201ENST00000516806 100 ntBASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 AP005660.1-201ENST00000522972 293 ntBASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 AC103810.6-201ENST00000606708 136 ntBASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 AL078604.3-201ENST00000615580 211 ntBASIC2.25□□□□□ -2.05
CTHRC1Q96CG8 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 208.4 ms