Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC087588.2-201ENST00000617667 426 ntBASIC1.45□□□□□ -2.18
VPS33AQ96AX1 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.45□□□□□ -2.18
VPS33AQ96AX1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
VPS33AQ96AX1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.44□□□□□ -2.18
VPS33AQ96AX1 RNU6-890P-201ENST00000384121 107 ntBASIC1.44□□□□□ -2.18
VPS33AQ96AX1 SNORA12.1-201ENST00000390873 148 ntBASIC1.44□□□□□ -2.18
VPS33AQ96AX1 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
VPS33AQ96AX1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS33AQ96AX1 AL137792.2-201ENST00000443484 235 ntBASIC1.44□□□□□ -2.18
VPS33AQ96AX1 RPL39P38-201ENST00000467018 153 ntBASIC1.44□□□□□ -2.18
VPS33AQ96AX1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.44□□□□□ -2.18
VPS33AQ96AX1 RNU6-559P-201ENST00000516151 98 ntBASIC1.44□□□□□ -2.18
VPS33AQ96AX1 RNU7-28P-201ENST00000516759 62 ntBASIC1.44□□□□□ -2.18
VPS33AQ96AX1 RNU6-341P-201ENST00000516973 96 ntBASIC1.44□□□□□ -2.18
VPS33AQ96AX1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS33AQ96AX1 AL512310.8-201ENST00000550183 120 ntBASIC1.44□□□□□ -2.18
VPS33AQ96AX1 AL021879.1-201ENST00000611756 288 ntBASIC1.44□□□□□ -2.18
VPS33AQ96AX1 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
VPS33AQ96AX1 RNU6-454P-201ENST00000364292 107 ntBASIC1.43□□□□□ -2.18
VPS33AQ96AX1 RNU6-1297P-201ENST00000384415 104 ntBASIC1.43□□□□□ -2.18
VPS33AQ96AX1 MIR660-201ENST00000385235 97 ntBASIC1.43□□□□□ -2.18
VPS33AQ96AX1 RPL30P13-201ENST00000418873 348 ntBASIC1.43□□□□□ -2.18
VPS33AQ96AX1 SNORA59A-201ENST00000459326 152 ntBASIC1.43□□□□□ -2.18
VPS33AQ96AX1 RNU6-470P-201ENST00000515954 104 ntBASIC1.43□□□□□ -2.18
VPS33AQ96AX1 RNU6-295P-201ENST00000516901 104 ntBASIC1.43□□□□□ -2.18
VPS33AQ96AX1 SUMO2P16-201ENST00000519475 264 ntBASIC1.43□□□□□ -2.18
VPS33AQ96AX1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS33AQ96AX1 AL160236.1-201ENST00000556317 195 ntBASIC1.43□□□□□ -2.18
VPS33AQ96AX1 AC091178.2-201ENST00000584401 117 ntBASIC1.43□□□□□ -2.18
VPS33AQ96AX1 MIR7974-201ENST00000615835 79 ntBASIC1.43□□□□□ -2.18
VPS33AQ96AX1 Y_RNA.243-201ENST00000364481 109 ntBASIC1.42□□□□□ -2.18
VPS33AQ96AX1 RNU6-1283P-201ENST00000365314 105 ntBASIC1.42□□□□□ -2.18
VPS33AQ96AX1 RNU6-376P-201ENST00000384731 106 ntBASIC1.42□□□□□ -2.18
VPS33AQ96AX1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS33AQ96AX1 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS33AQ96AX1 STAG3L5P-204ENST00000443759 179 ntBASIC1.42□□□□□ -2.18
VPS33AQ96AX1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS33AQ96AX1 SNORA25.15-201ENST00000516487 89 ntBASIC1.42□□□□□ -2.18
VPS33AQ96AX1 RNU2-56P-201ENST00000516826 190 ntBASIC1.42□□□□□ -2.18
VPS33AQ96AX1 AP002004.2-201ENST00000531656 154 ntBASIC1.42□□□□□ -2.18
VPS33AQ96AX1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.42□□□□□ -2.18
VPS33AQ96AX1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
VPS33AQ96AX1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.42□□□□□ -2.18
VPS33AQ96AX1 SNORD3E-202ENST00000627253 216 ntBASIC1.42□□□□□ -2.18
VPS33AQ96AX1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.42□□□□□ -2.18
VPS33AQ96AX1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
VPS33AQ96AX1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
VPS33AQ96AX1 Y_RNA.142-201ENST00000363491 102 ntBASIC1.41□□□□□ -2.18
VPS33AQ96AX1 Y_RNA.361-201ENST00000365515 120 ntBASIC1.41□□□□□ -2.18
VPS33AQ96AX1 Y_RNA.387-201ENST00000383918 102 ntBASIC1.41□□□□□ -2.18
VPS33AQ96AX1 RNY3P4-201ENST00000384428 101 ntBASIC1.41□□□□□ -2.18
VPS33AQ96AX1 CYCSP49-201ENST00000420810 319 ntBASIC1.41□□□□□ -2.18
VPS33AQ96AX1 FCF1P4-201ENST00000448326 183 ntBASIC1.41□□□□□ -2.18
VPS33AQ96AX1 ELOCP24-201ENST00000456370 334 ntBASIC1.41□□□□□ -2.18
VPS33AQ96AX1 AC091021.1-201ENST00000468051 388 ntBASIC1.41□□□□□ -2.18
VPS33AQ96AX1 RPL23AP94-201ENST00000512518 302 ntBASIC1.41□□□□□ -2.18
VPS33AQ96AX1 RNU6-120P-201ENST00000516077 103 ntBASIC1.41□□□□□ -2.18
VPS33AQ96AX1 RNA5SP61-201ENST00000516453 100 ntBASIC1.41□□□□□ -2.18
VPS33AQ96AX1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.41□□□□□ -2.18
VPS33AQ96AX1 AL161670.1-201ENST00000554348 137 ntBASIC1.41□□□□□ -2.18
VPS33AQ96AX1 MIR3664-201ENST00000579074 99 ntBASIC1.41□□□□□ -2.18
VPS33AQ96AX1 UBE2V2P2-201ENST00000587677 504 ntBASIC1.41□□□□□ -2.18
VPS33AQ96AX1 AC127459.3-201ENST00000624328 466 ntBASIC1.41□□□□□ -2.18
VPS33AQ96AX1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
VPS33AQ96AX1 RNU6-117P-201ENST00000365415 107 ntBASIC1.4□□□□□ -2.19
VPS33AQ96AX1 Y_RNA.390-201ENST00000383932 102 ntBASIC1.4□□□□□ -2.19
VPS33AQ96AX1 MIR520G-201ENST00000385064 90 ntBASIC1.4□□□□□ -2.19
VPS33AQ96AX1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.4□□□□□ -2.19
VPS33AQ96AX1 AC099799.1-201ENST00000439809 192 ntBASIC1.4□□□□□ -2.19
VPS33AQ96AX1 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.4□□□□□ -2.19
VPS33AQ96AX1 MTCO3P10-201ENST00000455912 772 ntBASIC1.4□□□□□ -2.19
VPS33AQ96AX1 RPL30P15-201ENST00000457129 321 ntBASIC1.4□□□□□ -2.19
VPS33AQ96AX1 RNU6-408P-201ENST00000515910 100 ntBASIC1.4□□□□□ -2.19
VPS33AQ96AX1 RNU6-911P-201ENST00000516523 104 ntBASIC1.4□□□□□ -2.19
VPS33AQ96AX1 AL358944.1-201ENST00000528537 144 ntBASIC1.4□□□□□ -2.19
VPS33AQ96AX1 CYP3A52P-201ENST00000563326 91 ntBASIC1.4□□□□□ -2.19
VPS33AQ96AX1 MIR3683-201ENST00000580847 82 ntBASIC1.4□□□□□ -2.19
VPS33AQ96AX1 Y_RNA.265-201ENST00000364677 108 ntBASIC1.39□□□□□ -2.19
VPS33AQ96AX1 MIR517C-201ENST00000385103 95 ntBASIC1.39□□□□□ -2.19
VPS33AQ96AX1 MIR23A-201ENST00000385245 73 ntBASIC1.39□□□□□ -2.19
VPS33AQ96AX1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
VPS33AQ96AX1 RNU5A-5P-201ENST00000411054 116 ntBASIC1.39□□□□□ -2.19
VPS33AQ96AX1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS33AQ96AX1 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.39□□□□□ -2.19
VPS33AQ96AX1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS33AQ96AX1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS33AQ96AX1 RNU2-12P-201ENST00000517216 168 ntBASIC1.39□□□□□ -2.19
VPS33AQ96AX1 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.39□□□□□ -2.19
VPS33AQ96AX1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.38□□□□□ -2.19
VPS33AQ96AX1 RNU6-490P-201ENST00000362985 107 ntBASIC1.38□□□□□ -2.19
VPS33AQ96AX1 RNU4-76P-201ENST00000364509 141 ntBASIC1.38□□□□□ -2.19
VPS33AQ96AX1 Y_RNA.267-201ENST00000364679 109 ntBASIC1.38□□□□□ -2.19
VPS33AQ96AX1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.38□□□□□ -2.19
VPS33AQ96AX1 RNU6-424P-201ENST00000384367 105 ntBASIC1.38□□□□□ -2.19
VPS33AQ96AX1 RNU6-505P-201ENST00000384427 107 ntBASIC1.38□□□□□ -2.19
VPS33AQ96AX1 MIR150-201ENST00000385048 84 ntBASIC1.38□□□□□ -2.19
VPS33AQ96AX1 SNORD78.2-201ENST00000391076 69 ntBASIC1.38□□□□□ -2.19
VPS33AQ96AX1 RNA5SP482-201ENST00000391269 118 ntBASIC1.38□□□□□ -2.19
VPS33AQ96AX1 AL354695.1-201ENST00000427935 228 ntBASIC1.38□□□□□ -2.19
VPS33AQ96AX1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms