Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RNU6-1235P-201ENST00000384559 107 ntBASIC2.87□□□□□ -1.95
SMC1BQ8NDV3 RNU6-1248P-201ENST00000391096 64 ntBASIC2.87□□□□□ -1.95
SMC1BQ8NDV3 U3.40-201ENST00000408706 208 ntBASIC2.87□□□□□ -1.95
SMC1BQ8NDV3 RNU2-48P-201ENST00000410694 191 ntBASIC2.87□□□□□ -1.95
SMC1BQ8NDV3 AC108667.1-201ENST00000428618 249 ntBASIC2.87□□□□□ -1.95
SMC1BQ8NDV3 MRPS10P1-201ENST00000448483 130 ntBASIC2.87□□□□□ -1.95
SMC1BQ8NDV3 AC016717.1-201ENST00000448918 286 ntBASIC2.87□□□□□ -1.95
SMC1BQ8NDV3 RNU6-498P-201ENST00000459468 107 ntBASIC2.87□□□□□ -1.95
SMC1BQ8NDV3 RNU6-221P-201ENST00000459541 99 ntBASIC2.87□□□□□ -1.95
SMC1BQ8NDV3 AC018868.1-201ENST00000491307 315 ntBASIC2.87□□□□□ -1.95
SMC1BQ8NDV3 SNORA31.15-201ENST00000516771 132 ntBASIC2.87□□□□□ -1.95
SMC1BQ8NDV3 PRELID2P1-201ENST00000552837 301 ntBASIC2.87□□□□□ -1.95
SMC1BQ8NDV3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.87□□□□□ -1.95
SMC1BQ8NDV3 U2.14-201ENST00000615943 113 ntBASIC2.87□□□□□ -1.95
SMC1BQ8NDV3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.87□□□□□ -1.95
SMC1BQ8NDV3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
SMC1BQ8NDV3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
SMC1BQ8NDV3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
SMC1BQ8NDV3 Y_RNA.54-201ENST00000362766 105 ntBASIC2.86□□□□□ -1.95
SMC1BQ8NDV3 Y_RNA.60-201ENST00000362831 98 ntBASIC2.86□□□□□ -1.95
SMC1BQ8NDV3 Y_RNA.243-201ENST00000364481 109 ntBASIC2.86□□□□□ -1.95
SMC1BQ8NDV3 SNORA25.9-201ENST00000365087 128 ntBASIC2.86□□□□□ -1.95
SMC1BQ8NDV3 Y_RNA.332-201ENST00000365271 113 ntBASIC2.86□□□□□ -1.95
SMC1BQ8NDV3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SMC1BQ8NDV3 RNU6-321P-201ENST00000410912 106 ntBASIC2.86□□□□□ -1.95
SMC1BQ8NDV3 SRIP3-201ENST00000413200 219 ntBASIC2.86□□□□□ -1.95
SMC1BQ8NDV3 AC008134.1-201ENST00000420943 193 ntBASIC2.86□□□□□ -1.95
SMC1BQ8NDV3 SNORA4.4-201ENST00000515921 135 ntBASIC2.86□□□□□ -1.95
SMC1BQ8NDV3 AL512605.2-201ENST00000592972 256 ntBASIC2.86□□□□□ -1.95
SMC1BQ8NDV3 MIR1291-201ENST00000627649 87 ntBASIC2.86□□□□□ -1.95
SMC1BQ8NDV3 Y_RNA.44-201ENST00000362676 108 ntBASIC2.85□□□□□ -1.95
SMC1BQ8NDV3 SNORA38-201ENST00000363946 132 ntBASIC2.85□□□□□ -1.95
SMC1BQ8NDV3 SNORD27-201ENST00000363981 72 ntBASIC2.85□□□□□ -1.95
SMC1BQ8NDV3 RNU6-418P-201ENST00000384035 107 ntBASIC2.85□□□□□ -1.95
SMC1BQ8NDV3 SNORD14D-201ENST00000384390 87 ntBASIC2.85□□□□□ -1.95
SMC1BQ8NDV3 Y_RNA.552-201ENST00000384665 112 ntBASIC2.85□□□□□ -1.95
SMC1BQ8NDV3 AL603910.2-201ENST00000407268 136 ntBASIC2.85□□□□□ -1.95
SMC1BQ8NDV3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.85□□□□□ -1.95
SMC1BQ8NDV3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.85□□□□□ -1.95
SMC1BQ8NDV3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SMC1BQ8NDV3 Y_RNA.680-201ENST00000516441 93 ntBASIC2.85□□□□□ -1.95
SMC1BQ8NDV3 RNU6-966P-201ENST00000516479 104 ntBASIC2.85□□□□□ -1.95
SMC1BQ8NDV3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.85□□□□□ -1.95
SMC1BQ8NDV3 AC005357.1-201ENST00000588399 301 ntBASIC2.85□□□□□ -1.95
SMC1BQ8NDV3 BX284668.6-201ENST00000606899 438 ntBASIC2.85□□□□□ -1.95
SMC1BQ8NDV3 AC090425.1-201ENST00000610007 140 ntBASIC2.85□□□□□ -1.95
SMC1BQ8NDV3 U6.115-201ENST00000636045 103 ntBASIC2.85□□□□□ -1.95
SMC1BQ8NDV3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
SMC1BQ8NDV3 AC016717.2-201ENST00000609089 5141 ntBASIC2.84□□□□□ -1.95
SMC1BQ8NDV3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SMC1BQ8NDV3 Y_RNA.20-201ENST00000362479 113 ntBASIC2.84□□□□□ -1.95
SMC1BQ8NDV3 SNORD115-30-201ENST00000364117 82 ntBASIC2.84□□□□□ -1.95
SMC1BQ8NDV3 SNORA25.6-201ENST00000364121 118 ntBASIC2.84□□□□□ -1.95
SMC1BQ8NDV3 Y_RNA.329-201ENST00000365209 107 ntBASIC2.84□□□□□ -1.95
SMC1BQ8NDV3 Y_RNA.418-201ENST00000384029 102 ntBASIC2.84□□□□□ -1.95
SMC1BQ8NDV3 AL031003.1-201ENST00000404229 172 ntBASIC2.84□□□□□ -1.95
SMC1BQ8NDV3 MTCO1P5-201ENST00000433573 344 ntBASIC2.84□□□□□ -1.95
SMC1BQ8NDV3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SMC1BQ8NDV3 AL357134.1-201ENST00000445848 426 ntBASIC2.84□□□□□ -1.95
SMC1BQ8NDV3 PRELID3BP1-201ENST00000457142 540 ntBASIC2.84□□□□□ -1.95
SMC1BQ8NDV3 RNU7-26P-201ENST00000458980 63 ntBASIC2.84□□□□□ -1.95
SMC1BQ8NDV3 MTND1P19-201ENST00000511780 315 ntBASIC2.84□□□□□ -1.95
SMC1BQ8NDV3 SNORA70.12-201ENST00000516084 153 ntBASIC2.84□□□□□ -1.95
SMC1BQ8NDV3 RNU6-436P-201ENST00000516171 114 ntBASIC2.84□□□□□ -1.95
SMC1BQ8NDV3 RNU6-388P-201ENST00000517012 105 ntBASIC2.84□□□□□ -1.95
SMC1BQ8NDV3 RNU6-389P-201ENST00000517048 105 ntBASIC2.84□□□□□ -1.95
SMC1BQ8NDV3 NDUFA5P6-201ENST00000542110 379 ntBASIC2.84□□□□□ -1.95
SMC1BQ8NDV3 DEFB117-201ENST00000602356 141 ntBASIC2.84□□□□□ -1.95
SMC1BQ8NDV3 MIR219B-201ENST00000637023 88 ntBASIC2.84□□□□□ -1.95
SMC1BQ8NDV3 MAPK10-266ENST00000641066 6555 ntBASIC2.83□□□□□ -1.96
SMC1BQ8NDV3 RNY1P10-201ENST00000363268 113 ntBASIC2.83□□□□□ -1.96
SMC1BQ8NDV3 RNU6-1318P-201ENST00000365389 103 ntBASIC2.83□□□□□ -1.96
SMC1BQ8NDV3 AC108059.2-201ENST00000434626 151 ntBASIC2.83□□□□□ -1.96
SMC1BQ8NDV3 AC010531.2-201ENST00000465012 153 ntBASIC2.83□□□□□ -1.96
SMC1BQ8NDV3 AC026436.1-201ENST00000510537 270 ntBASIC2.83□□□□□ -1.96
SMC1BQ8NDV3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.83□□□□□ -1.96
SMC1BQ8NDV3 AC010297.1-201ENST00000623948 149 ntBASIC2.83□□□□□ -1.96
SMC1BQ8NDV3 AC080100.1-201ENST00000624239 5356 ntBASIC2.83□□□□□ -1.96
SMC1BQ8NDV3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SMC1BQ8NDV3 RNU4-80P-201ENST00000363200 141 ntBASIC2.82□□□□□ -1.96
SMC1BQ8NDV3 RNA5SP456-201ENST00000364002 114 ntBASIC2.82□□□□□ -1.96
SMC1BQ8NDV3 RNU6-710P-201ENST00000410424 105 ntBASIC2.82□□□□□ -1.96
SMC1BQ8NDV3 MTCO1P44-201ENST00000441935 243 ntBASIC2.82□□□□□ -1.96
SMC1BQ8NDV3 AC245102.2-201ENST00000448956 180 ntBASIC2.82□□□□□ -1.96
SMC1BQ8NDV3 AC091959.1-201ENST00000495857 238 ntBASIC2.82□□□□□ -1.96
SMC1BQ8NDV3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.82□□□□□ -1.96
SMC1BQ8NDV3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.82□□□□□ -1.96
SMC1BQ8NDV3 RNU6-794P-201ENST00000517261 64 ntBASIC2.82□□□□□ -1.96
SMC1BQ8NDV3 AC026271.5-201ENST00000577873 130 ntBASIC2.82□□□□□ -1.96
SMC1BQ8NDV3 MIR3145-201ENST00000580727 82 ntBASIC2.82□□□□□ -1.96
SMC1BQ8NDV3 AC010900.2-201ENST00000604508 210 ntBASIC2.82□□□□□ -1.96
SMC1BQ8NDV3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.82□□□□□ -1.96
SMC1BQ8NDV3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.82□□□□□ -1.96
SMC1BQ8NDV3 FO624990.1-201ENST00000636373 85 ntBASIC2.82□□□□□ -1.96
SMC1BQ8NDV3 Y_RNA.99-201ENST00000363138 105 ntBASIC2.81□□□□□ -1.96
SMC1BQ8NDV3 Y_RNA.277-201ENST00000364754 102 ntBASIC2.81□□□□□ -1.96
SMC1BQ8NDV3 Y_RNA.515-201ENST00000384535 112 ntBASIC2.81□□□□□ -1.96
SMC1BQ8NDV3 EDDM3CP-201ENST00000415977 425 ntBASIC2.81□□□□□ -1.96
SMC1BQ8NDV3 CYCSP49-201ENST00000420810 319 ntBASIC2.81□□□□□ -1.96
SMC1BQ8NDV3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms