Protein–RNA interactions for Protein: Q8NB49

ATP11C, Phospholipid-transporting ATPase IG, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11CQ8NB49 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
ATP11CQ8NB49 RNU6-862P-201ENST00000362804 105 ntBASIC2.3□□□□□ -2.04
ATP11CQ8NB49 SNORD113-8-201ENST00000363497 74 ntBASIC2.3□□□□□ -2.04
ATP11CQ8NB49 AL355796.1-201ENST00000406706 323 ntBASIC2.3□□□□□ -2.04
ATP11CQ8NB49 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.3□□□□□ -2.04
ATP11CQ8NB49 RNU4-30P-201ENST00000410245 143 ntBASIC2.3□□□□□ -2.04
ATP11CQ8NB49 AL356379.1-201ENST00000414105 126 ntBASIC2.3□□□□□ -2.04
ATP11CQ8NB49 DYNLT3P2-201ENST00000442517 295 ntBASIC2.3□□□□□ -2.04
ATP11CQ8NB49 AC055731.1-201ENST00000474387 401 ntBASIC2.3□□□□□ -2.04
ATP11CQ8NB49 RNU6-237P-201ENST00000515985 71 ntBASIC2.3□□□□□ -2.04
ATP11CQ8NB49 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.3□□□□□ -2.04
ATP11CQ8NB49 AL117187.1-201ENST00000555482 181 ntBASIC2.3□□□□□ -2.04
ATP11CQ8NB49 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.3□□□□□ -2.04
ATP11CQ8NB49 AC007229.1-201ENST00000590455 412 ntBASIC2.3□□□□□ -2.04
ATP11CQ8NB49 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
ATP11CQ8NB49 MTND5P6-201ENST00000422338 1798 ntBASIC2.3□□□□□ -2.04
ATP11CQ8NB49 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
ATP11CQ8NB49 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ATP11CQ8NB49 Y_RNA.64-201ENST00000362845 102 ntBASIC2.29□□□□□ -2.04
ATP11CQ8NB49 Y_RNA.105-201ENST00000363182 111 ntBASIC2.29□□□□□ -2.04
ATP11CQ8NB49 RNU6-238P-201ENST00000363313 106 ntBASIC2.29□□□□□ -2.04
ATP11CQ8NB49 Y_RNA.176-201ENST00000363815 109 ntBASIC2.29□□□□□ -2.04
ATP11CQ8NB49 RNU6-324P-201ENST00000363957 106 ntBASIC2.29□□□□□ -2.04
ATP11CQ8NB49 RNU6-806P-201ENST00000365147 105 ntBASIC2.29□□□□□ -2.04
ATP11CQ8NB49 MIR221-201ENST00000385135 110 ntBASIC2.29□□□□□ -2.04
ATP11CQ8NB49 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
ATP11CQ8NB49 SNORA11.4-201ENST00000408823 129 ntBASIC2.29□□□□□ -2.04
ATP11CQ8NB49 RNU6-121P-201ENST00000410525 99 ntBASIC2.29□□□□□ -2.04
ATP11CQ8NB49 Y_RNA.602-201ENST00000410535 92 ntBASIC2.29□□□□□ -2.04
ATP11CQ8NB49 RNA5SP450-201ENST00000411206 102 ntBASIC2.29□□□□□ -2.04
ATP11CQ8NB49 AC018634.1-201ENST00000437554 401 ntBASIC2.29□□□□□ -2.04
ATP11CQ8NB49 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
ATP11CQ8NB49 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.29□□□□□ -2.04
ATP11CQ8NB49 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.29□□□□□ -2.04
ATP11CQ8NB49 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.29□□□□□ -2.04
ATP11CQ8NB49 AL137100.2-201ENST00000555786 315 ntBASIC2.29□□□□□ -2.04
ATP11CQ8NB49 MIR4524B-201ENST00000581569 115 ntBASIC2.29□□□□□ -2.04
ATP11CQ8NB49 AC005828.6-201ENST00000606610 232 ntBASIC2.29□□□□□ -2.04
ATP11CQ8NB49 U1.36-201ENST00000620684 176 ntBASIC2.29□□□□□ -2.04
ATP11CQ8NB49 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
ATP11CQ8NB49 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ATP11CQ8NB49 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.28□□□□□ -2.04
ATP11CQ8NB49 RNU6-271P-201ENST00000363858 105 ntBASIC2.28□□□□□ -2.04
ATP11CQ8NB49 SNORD115-30-201ENST00000364117 82 ntBASIC2.28□□□□□ -2.04
ATP11CQ8NB49 RNU1-96P-201ENST00000364163 162 ntBASIC2.28□□□□□ -2.04
ATP11CQ8NB49 SNORA16B-201ENST00000364674 135 ntBASIC2.28□□□□□ -2.04
ATP11CQ8NB49 Y_RNA.287-201ENST00000364853 94 ntBASIC2.28□□□□□ -2.04
ATP11CQ8NB49 RNU6-713P-201ENST00000384761 107 ntBASIC2.28□□□□□ -2.04
ATP11CQ8NB49 AL117342.1-201ENST00000404861 406 ntBASIC2.28□□□□□ -2.04
ATP11CQ8NB49 MIR548F4-201ENST00000408515 105 ntBASIC2.28□□□□□ -2.04
ATP11CQ8NB49 RN7SKP192-201ENST00000411291 327 ntBASIC2.28□□□□□ -2.04
ATP11CQ8NB49 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
ATP11CQ8NB49 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.28□□□□□ -2.04
ATP11CQ8NB49 AL358176.2-201ENST00000425769 204 ntBASIC2.28□□□□□ -2.04
ATP11CQ8NB49 RPS27P22-201ENST00000478056 241 ntBASIC2.28□□□□□ -2.04
ATP11CQ8NB49 AC098869.1-201ENST00000481627 292 ntBASIC2.28□□□□□ -2.04
ATP11CQ8NB49 AC025465.3-201ENST00000510570 311 ntBASIC2.28□□□□□ -2.04
ATP11CQ8NB49 AP003733.2-201ENST00000529409 171 ntBASIC2.28□□□□□ -2.04
ATP11CQ8NB49 MIR1273D-201ENST00000577266 86 ntBASIC2.28□□□□□ -2.04
ATP11CQ8NB49 AC022513.1-201ENST00000624512 117 ntBASIC2.28□□□□□ -2.04
ATP11CQ8NB49 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.05
ATP11CQ8NB49 RNA5SP37-201ENST00000365420 130 ntBASIC2.27□□□□□ -2.05
ATP11CQ8NB49 AL031003.1-201ENST00000404229 172 ntBASIC2.27□□□□□ -2.05
ATP11CQ8NB49 RN7SKP223-201ENST00000410582 62 ntBASIC2.27□□□□□ -2.05
ATP11CQ8NB49 RNU2-40P-201ENST00000410833 196 ntBASIC2.27□□□□□ -2.05
ATP11CQ8NB49 CST2P1-201ENST00000425770 87 ntBASIC2.27□□□□□ -2.05
ATP11CQ8NB49 MTND2P29-201ENST00000438595 412 ntBASIC2.27□□□□□ -2.05
ATP11CQ8NB49 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ATP11CQ8NB49 snoU13.15-201ENST00000459407 104 ntBASIC2.27□□□□□ -2.05
ATP11CQ8NB49 RPS29P21-201ENST00000496272 170 ntBASIC2.27□□□□□ -2.05
ATP11CQ8NB49 HMGB3P17-201ENST00000504195 649 ntBASIC2.27□□□□□ -2.05
ATP11CQ8NB49 SNORA70.12-201ENST00000516084 153 ntBASIC2.27□□□□□ -2.05
ATP11CQ8NB49 RNU6-436P-201ENST00000516171 114 ntBASIC2.27□□□□□ -2.05
ATP11CQ8NB49 RNU6-966P-201ENST00000516479 104 ntBASIC2.27□□□□□ -2.05
ATP11CQ8NB49 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
ATP11CQ8NB49 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.27□□□□□ -2.05
ATP11CQ8NB49 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.27□□□□□ -2.05
ATP11CQ8NB49 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.27□□□□□ -2.05
ATP11CQ8NB49 AP000553.5-201ENST00000641933 54 ntBASIC2.27□□□□□ -2.05
ATP11CQ8NB49 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.27□□□□□ -2.05
ATP11CQ8NB49 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
ATP11CQ8NB49 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.26□□□□□ -2.05
ATP11CQ8NB49 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
ATP11CQ8NB49 SNORD114-7-201ENST00000362520 77 ntBASIC2.26□□□□□ -2.05
ATP11CQ8NB49 Y_RNA.26-201ENST00000362539 101 ntBASIC2.26□□□□□ -2.05
ATP11CQ8NB49 SNORA27.1-201ENST00000362604 124 ntBASIC2.26□□□□□ -2.05
ATP11CQ8NB49 RNU4-90P-201ENST00000362773 141 ntBASIC2.26□□□□□ -2.05
ATP11CQ8NB49 RNU6-1309P-201ENST00000363305 108 ntBASIC2.26□□□□□ -2.05
ATP11CQ8NB49 Y_RNA.222-201ENST00000364264 102 ntBASIC2.26□□□□□ -2.05
ATP11CQ8NB49 RNU6-407P-201ENST00000365280 104 ntBASIC2.26□□□□□ -2.05
ATP11CQ8NB49 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.26□□□□□ -2.05
ATP11CQ8NB49 Y_RNA.574-201ENST00000384766 95 ntBASIC2.26□□□□□ -2.05
ATP11CQ8NB49 RNU6-1105P-201ENST00000384774 107 ntBASIC2.26□□□□□ -2.05
ATP11CQ8NB49 MIR515-2-201ENST00000384883 83 ntBASIC2.26□□□□□ -2.05
ATP11CQ8NB49 MIR515-1-201ENST00000384884 83 ntBASIC2.26□□□□□ -2.05
ATP11CQ8NB49 MIR17-201ENST00000385012 84 ntBASIC2.26□□□□□ -2.05
ATP11CQ8NB49 MIR873-201ENST00000401120 77 ntBASIC2.26□□□□□ -2.05
ATP11CQ8NB49 RNA5SP501-201ENST00000410990 112 ntBASIC2.26□□□□□ -2.05
ATP11CQ8NB49 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.26□□□□□ -2.05
ATP11CQ8NB49 AC099677.2-201ENST00000436385 175 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms