Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 RRN3P3-201ENST00000549207 578 ntBASIC1.66□□□□□ -2.14
RTL3Q8N8U3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.66□□□□□ -2.14
RTL3Q8N8U3 Y_RNA.812-201ENST00000610788 101 ntBASIC1.66□□□□□ -2.14
RTL3Q8N8U3 Y_RNA.784-201ENST00000613803 101 ntBASIC1.66□□□□□ -2.14
RTL3Q8N8U3 Y_RNA.787-201ENST00000616522 101 ntBASIC1.66□□□□□ -2.14
RTL3Q8N8U3 Y_RNA.780-201ENST00000617336 101 ntBASIC1.66□□□□□ -2.14
RTL3Q8N8U3 Y_RNA.801-201ENST00000619005 101 ntBASIC1.66□□□□□ -2.14
RTL3Q8N8U3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.66□□□□□ -2.14
RTL3Q8N8U3 AC091812.1-201ENST00000432235 1948 ntBASIC1.66□□□□□ -2.14
RTL3Q8N8U3 RNU6-862P-201ENST00000362804 105 ntBASIC1.65□□□□□ -2.15
RTL3Q8N8U3 RNU6-879P-201ENST00000364328 108 ntBASIC1.65□□□□□ -2.15
RTL3Q8N8U3 Y_RNA.415-201ENST00000384012 112 ntBASIC1.65□□□□□ -2.15
RTL3Q8N8U3 ELOCP21-201ENST00000412558 336 ntBASIC1.65□□□□□ -2.15
RTL3Q8N8U3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.65□□□□□ -2.15
RTL3Q8N8U3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.65□□□□□ -2.15
RTL3Q8N8U3 SNORD13-201ENST00000459299 104 ntBASIC1.65□□□□□ -2.15
RTL3Q8N8U3 AC010469.2-201ENST00000496412 480 ntBASIC1.65□□□□□ -2.15
RTL3Q8N8U3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.65□□□□□ -2.15
RTL3Q8N8U3 RNU6-237P-201ENST00000515985 71 ntBASIC1.65□□□□□ -2.15
RTL3Q8N8U3 RNU2-34P-201ENST00000516534 121 ntBASIC1.65□□□□□ -2.15
RTL3Q8N8U3 AC022616.4-201ENST00000522985 181 ntBASIC1.65□□□□□ -2.15
RTL3Q8N8U3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.65□□□□□ -2.15
RTL3Q8N8U3 AC104695.3-201ENST00000604052 296 ntBASIC1.65□□□□□ -2.15
RTL3Q8N8U3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.65□□□□□ -2.15
RTL3Q8N8U3 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.65□□□□□ -2.15
RTL3Q8N8U3 AC010205.1-201ENST00000616668 449 ntBASIC1.65□□□□□ -2.15
RTL3Q8N8U3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.65□□□□□ -2.15
RTL3Q8N8U3 U6.92-201ENST00000636464 89 ntBASIC1.65□□□□□ -2.15
RTL3Q8N8U3 ZNF72P-201ENST00000425869 1908 ntBASIC1.64□□□□□ -2.15
RTL3Q8N8U3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
RTL3Q8N8U3 RNU1-96P-201ENST00000364163 162 ntBASIC1.64□□□□□ -2.15
RTL3Q8N8U3 RNU6-418P-201ENST00000384035 107 ntBASIC1.64□□□□□ -2.15
RTL3Q8N8U3 RNU6-975P-201ENST00000384296 105 ntBASIC1.64□□□□□ -2.15
RTL3Q8N8U3 RNU6-296P-201ENST00000384608 107 ntBASIC1.64□□□□□ -2.15
RTL3Q8N8U3 MIR628-201ENST00000385229 95 ntBASIC1.64□□□□□ -2.15
RTL3Q8N8U3 Y_RNA.595-201ENST00000410403 105 ntBASIC1.64□□□□□ -2.15
RTL3Q8N8U3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.64□□□□□ -2.15
RTL3Q8N8U3 SDAD1P3-201ENST00000427380 333 ntBASIC1.64□□□□□ -2.15
RTL3Q8N8U3 FTH1P12-201ENST00000432137 551 ntBASIC1.64□□□□□ -2.15
RTL3Q8N8U3 AC005908.1-201ENST00000468701 347 ntBASIC1.64□□□□□ -2.15
RTL3Q8N8U3 AC114982.1-201ENST00000469402 321 ntBASIC1.64□□□□□ -2.15
RTL3Q8N8U3 AC067942.3-201ENST00000512025 362 ntBASIC1.64□□□□□ -2.15
RTL3Q8N8U3 RNU6-1041P-201ENST00000516254 102 ntBASIC1.64□□□□□ -2.15
RTL3Q8N8U3 RNU6-856P-201ENST00000516959 98 ntBASIC1.64□□□□□ -2.15
RTL3Q8N8U3 RNU6-1137P-201ENST00000517073 99 ntBASIC1.64□□□□□ -2.15
RTL3Q8N8U3 MIR4680-201ENST00000580906 66 ntBASIC1.64□□□□□ -2.15
RTL3Q8N8U3 MIR4524B-201ENST00000581569 115 ntBASIC1.64□□□□□ -2.15
RTL3Q8N8U3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.64□□□□□ -2.15
RTL3Q8N8U3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.64□□□□□ -2.15
RTL3Q8N8U3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
RTL3Q8N8U3 AC010615.1-201ENST00000594254 1764 ntBASIC1.64□□□□□ -2.15
RTL3Q8N8U3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
RTL3Q8N8U3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
RTL3Q8N8U3 SNORA63-201ENST00000363450 132 ntBASIC1.63□□□□□ -2.15
RTL3Q8N8U3 U3.8-201ENST00000363675 217 ntBASIC1.63□□□□□ -2.15
RTL3Q8N8U3 Y_RNA.526-201ENST00000384572 110 ntBASIC1.63□□□□□ -2.15
RTL3Q8N8U3 RNU6-823P-201ENST00000391042 103 ntBASIC1.63□□□□□ -2.15
RTL3Q8N8U3 SNORD78.2-201ENST00000391076 69 ntBASIC1.63□□□□□ -2.15
RTL3Q8N8U3 SNORD12B-201ENST00000410433 91 ntBASIC1.63□□□□□ -2.15
RTL3Q8N8U3 AC074290.1-201ENST00000448883 135 ntBASIC1.63□□□□□ -2.15
RTL3Q8N8U3 PCNPP5-201ENST00000452246 481 ntBASIC1.63□□□□□ -2.15
RTL3Q8N8U3 SNORA40.9-201ENST00000515895 93 ntBASIC1.63□□□□□ -2.15
RTL3Q8N8U3 RNU6-970P-201ENST00000516312 107 ntBASIC1.63□□□□□ -2.15
RTL3Q8N8U3 AC040926.1-201ENST00000530195 238 ntBASIC1.63□□□□□ -2.15
RTL3Q8N8U3 AC015712.3-201ENST00000559380 164 ntBASIC1.63□□□□□ -2.15
RTL3Q8N8U3 MIR4422-201ENST00000581938 83 ntBASIC1.63□□□□□ -2.15
RTL3Q8N8U3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.63□□□□□ -2.15
RTL3Q8N8U3 AC099654.10-201ENST00000640395 161 ntBASIC1.63□□□□□ -2.15
RTL3Q8N8U3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.63□□□□□ -2.15
RTL3Q8N8U3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.63□□□□□ -2.15
RTL3Q8N8U3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
RTL3Q8N8U3 RNU6-727P-201ENST00000363592 107 ntBASIC1.62□□□□□ -2.15
RTL3Q8N8U3 RNU6-1019P-201ENST00000364424 107 ntBASIC1.62□□□□□ -2.15
RTL3Q8N8U3 SNORD87-201ENST00000364849 89 ntBASIC1.62□□□□□ -2.15
RTL3Q8N8U3 SNORD14.1-201ENST00000365609 90 ntBASIC1.62□□□□□ -2.15
RTL3Q8N8U3 Y_RNA.422-201ENST00000384054 114 ntBASIC1.62□□□□□ -2.15
RTL3Q8N8U3 Y_RNA.458-201ENST00000384240 102 ntBASIC1.62□□□□□ -2.15
RTL3Q8N8U3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.62□□□□□ -2.15
RTL3Q8N8U3 AC099677.2-201ENST00000436385 175 ntBASIC1.62□□□□□ -2.15
RTL3Q8N8U3 HSPE1P9-201ENST00000440046 311 ntBASIC1.62□□□□□ -2.15
RTL3Q8N8U3 AC069257.2-201ENST00000441819 155 ntBASIC1.62□□□□□ -2.15
RTL3Q8N8U3 FCF1P4-201ENST00000448326 183 ntBASIC1.62□□□□□ -2.15
RTL3Q8N8U3 AC108210.2-201ENST00000503681 201 ntBASIC1.62□□□□□ -2.15
RTL3Q8N8U3 RNU6-948P-201ENST00000516374 107 ntBASIC1.62□□□□□ -2.15
RTL3Q8N8U3 Y_RNA.721-201ENST00000517207 102 ntBASIC1.62□□□□□ -2.15
RTL3Q8N8U3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.62□□□□□ -2.15
RTL3Q8N8U3 AL121655.1-201ENST00000605811 308 ntBASIC1.62□□□□□ -2.15
RTL3Q8N8U3 AC240442.1-201ENST00000616055 283 ntBASIC1.62□□□□□ -2.15
RTL3Q8N8U3 AC007742.2-201ENST00000618226 398 ntBASIC1.62□□□□□ -2.15
RTL3Q8N8U3 RNU1-17P-201ENST00000363022 152 ntBASIC1.61□□□□□ -2.15
RTL3Q8N8U3 RNU4-50P-201ENST00000364361 141 ntBASIC1.61□□□□□ -2.15
RTL3Q8N8U3 SNORA63.7-201ENST00000365579 123 ntBASIC1.61□□□□□ -2.15
RTL3Q8N8U3 RNU6-1264P-201ENST00000383891 107 ntBASIC1.61□□□□□ -2.15
RTL3Q8N8U3 RNU6-639P-201ENST00000384074 107 ntBASIC1.61□□□□□ -2.15
RTL3Q8N8U3 RNU6-1235P-201ENST00000384559 107 ntBASIC1.61□□□□□ -2.15
RTL3Q8N8U3 MIR548B-201ENST00000385247 97 ntBASIC1.61□□□□□ -2.15
RTL3Q8N8U3 RNU6-360P-201ENST00000390944 104 ntBASIC1.61□□□□□ -2.15
RTL3Q8N8U3 MIR1185-2-201ENST00000408687 86 ntBASIC1.61□□□□□ -2.15
RTL3Q8N8U3 RNU6-985P-201ENST00000410182 104 ntBASIC1.61□□□□□ -2.15
RTL3Q8N8U3 TOMM22P2-201ENST00000430735 237 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 289.4 ms