Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 SDR42E1P4-201ENST00000620894 481 ntBASIC1.94□□□□□ -2.1
PCDH20Q8N6Y1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.94□□□□□ -2.1
PCDH20Q8N6Y1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
PCDH20Q8N6Y1 AL356292.1-201ENST00000283110 373 ntBASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 Y_RNA.101-201ENST00000363154 102 ntBASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 RNU6-1175P-201ENST00000365200 107 ntBASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 MIR676-201ENST00000390702 67 ntBASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 RNU11-3P-201ENST00000391111 133 ntBASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 SUMO2P12-201ENST00000405924 140 ntBASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 RNU5A-5P-201ENST00000411054 116 ntBASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 AL390729.2-201ENST00000416137 156 ntBASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 AL445685.2-201ENST00000422551 342 ntBASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 RN7SL274P-201ENST00000492268 272 ntBASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 RNU2-12P-201ENST00000517216 168 ntBASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 RNU2-19P-201ENST00000517288 84 ntBASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 SUMO2P18-201ENST00000518873 252 ntBASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 AP005660.1-201ENST00000522972 293 ntBASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 AC110588.1-201ENST00000559699 137 ntBASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 AC136443.5-201ENST00000603741 370 ntBASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 AL353149.1-201ENST00000610667 244 ntBASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 MIR376A1-201ENST00000616574 68 ntBASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 MIR7843-201ENST00000622274 79 ntBASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PCDH20Q8N6Y1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
PCDH20Q8N6Y1 Y_RNA.214-201ENST00000364201 112 ntBASIC1.92□□□□□ -2.1
PCDH20Q8N6Y1 RPL21P1-201ENST00000399532 476 ntBASIC1.92□□□□□ -2.1
PCDH20Q8N6Y1 RNU2-54P-201ENST00000410299 190 ntBASIC1.92□□□□□ -2.1
PCDH20Q8N6Y1 RNU2-20P-201ENST00000410425 191 ntBASIC1.92□□□□□ -2.1
PCDH20Q8N6Y1 ELOCP20-201ENST00000422460 345 ntBASIC1.92□□□□□ -2.1
PCDH20Q8N6Y1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.92□□□□□ -2.1
PCDH20Q8N6Y1 RNU6-1041P-201ENST00000516254 102 ntBASIC1.92□□□□□ -2.1
PCDH20Q8N6Y1 RNU6-1146P-201ENST00000516282 102 ntBASIC1.92□□□□□ -2.1
PCDH20Q8N6Y1 RNU6-1045P-201ENST00000516321 107 ntBASIC1.92□□□□□ -2.1
PCDH20Q8N6Y1 RNU6-295P-201ENST00000516901 104 ntBASIC1.92□□□□□ -2.1
PCDH20Q8N6Y1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.92□□□□□ -2.1
PCDH20Q8N6Y1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.92□□□□□ -2.1
PCDH20Q8N6Y1 MIR4300-201ENST00000581016 96 ntBASIC1.92□□□□□ -2.1
PCDH20Q8N6Y1 AC005786.1-201ENST00000588553 154 ntBASIC1.92□□□□□ -2.1
PCDH20Q8N6Y1 SNRPGP19-201ENST00000603826 189 ntBASIC1.92□□□□□ -2.1
PCDH20Q8N6Y1 AC022441.3-201ENST00000605737 136 ntBASIC1.92□□□□□ -2.1
PCDH20Q8N6Y1 AC022513.1-201ENST00000624512 117 ntBASIC1.92□□□□□ -2.1
PCDH20Q8N6Y1 U6.115-201ENST00000636045 103 ntBASIC1.92□□□□□ -2.1
PCDH20Q8N6Y1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
PCDH20Q8N6Y1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
PCDH20Q8N6Y1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
PCDH20Q8N6Y1 snoU2-30.2-201ENST00000362805 70 ntBASIC1.91□□□□□ -2.1
PCDH20Q8N6Y1 RNU6-770P-201ENST00000363929 105 ntBASIC1.91□□□□□ -2.1
PCDH20Q8N6Y1 Y_RNA.243-201ENST00000364481 109 ntBASIC1.91□□□□□ -2.1
PCDH20Q8N6Y1 Y_RNA.446-201ENST00000384178 104 ntBASIC1.91□□□□□ -2.1
PCDH20Q8N6Y1 Y_RNA.459-201ENST00000384251 102 ntBASIC1.91□□□□□ -2.1
PCDH20Q8N6Y1 MIR1253-201ENST00000408273 105 ntBASIC1.91□□□□□ -2.1
PCDH20Q8N6Y1 MIR548F4-201ENST00000408515 105 ntBASIC1.91□□□□□ -2.1
PCDH20Q8N6Y1 RNA5SP489-201ENST00000410986 109 ntBASIC1.91□□□□□ -2.1
PCDH20Q8N6Y1 RNA5SP450-201ENST00000411206 102 ntBASIC1.91□□□□□ -2.1
PCDH20Q8N6Y1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.91□□□□□ -2.1
PCDH20Q8N6Y1 HMGN2P34-201ENST00000437647 269 ntBASIC1.91□□□□□ -2.1
PCDH20Q8N6Y1 SNORD65B-201ENST00000459126 73 ntBASIC1.91□□□□□ -2.1
PCDH20Q8N6Y1 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.91□□□□□ -2.1
PCDH20Q8N6Y1 AC006380.1-201ENST00000603598 186 ntBASIC1.91□□□□□ -2.1
PCDH20Q8N6Y1 AC005828.6-201ENST00000606610 232 ntBASIC1.91□□□□□ -2.1
PCDH20Q8N6Y1 AC011373.1-201ENST00000607270 237 ntBASIC1.91□□□□□ -2.1
PCDH20Q8N6Y1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
PCDH20Q8N6Y1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
PCDH20Q8N6Y1 Y_RNA.105-201ENST00000363182 111 ntBASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 SNORD115-46-201ENST00000390982 71 ntBASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 SNORA26.9-201ENST00000391322 122 ntBASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 RNU6-121P-201ENST00000410525 99 ntBASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 RNU6-1199P-201ENST00000411249 104 ntBASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 SUMO1P2-201ENST00000452524 304 ntBASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 AC005042.3-201ENST00000453230 174 ntBASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 MTATP8P1-201ENST00000467115 207 ntBASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 AC010598.1-201ENST00000510378 103 ntBASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 AC025465.3-201ENST00000510570 311 ntBASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 AC107393.1-201ENST00000512403 346 ntBASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 RNU6-1143P-201ENST00000516125 104 ntBASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 RNY3P15-201ENST00000516297 97 ntBASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 RNU6-155P-201ENST00000516347 100 ntBASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 RNU6-966P-201ENST00000516479 104 ntBASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 RNU7-110P-201ENST00000516891 62 ntBASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 AL117187.1-201ENST00000555482 181 ntBASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 PRR13P7-201ENST00000605538 430 ntBASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 MIR6845-201ENST00000613182 61 ntBASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 AC006435.5-201ENST00000624486 112 ntBASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 MIR338-201ENST00000636369 67 ntBASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.11
PCDH20Q8N6Y1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.89□□□□□ -2.11
PCDH20Q8N6Y1 Y_RNA.19-201ENST00000362462 99 ntBASIC1.89□□□□□ -2.11
PCDH20Q8N6Y1 SNORD115-30-201ENST00000364117 82 ntBASIC1.89□□□□□ -2.11
PCDH20Q8N6Y1 SNORA20B-201ENST00000384220 132 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms