Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 Z98742.2-201ENST00000431564 187 ntBASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 SCARNA17.1-201ENST00000516211 143 ntBASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 SCARNA17.2-201ENST00000516334 143 ntBASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 Y_RNA.676-201ENST00000516393 96 ntBASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 RNU2-4P-201ENST00000606190 192 ntBASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 U2.15-201ENST00000611544 191 ntBASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 U2.16-201ENST00000613119 191 ntBASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 U2.12-201ENST00000613778 191 ntBASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 SCARNA17.4-201ENST00000614296 143 ntBASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 U2.9-201ENST00000615427 191 ntBASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 U2.11-201ENST00000616345 191 ntBASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 U2.2-201ENST00000616535 191 ntBASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 AC013791.1-201ENST00000616619 62 ntBASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 U2.3-201ENST00000617785 191 ntBASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 U2.19-201ENST00000618602 191 ntBASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 RNU2-1-201ENST00000618664 191 ntBASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 U2.6-201ENST00000619225 191 ntBASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 U2.5-201ENST00000619465 191 ntBASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 U2.10-201ENST00000620268 191 ntBASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 AC010329.5-201ENST00000623497 2174 ntBASIC2.61□□□□□ -1.99
SLC44A3Q8N4M1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.61□□□□□ -1.99
SLC44A3Q8N4M1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.61□□□□□ -1.99
SLC44A3Q8N4M1 RNU1-105P-201ENST00000363470 161 ntBASIC2.61□□□□□ -1.99
SLC44A3Q8N4M1 Y_RNA.310-201ENST00000365063 113 ntBASIC2.61□□□□□ -1.99
SLC44A3Q8N4M1 AL355497.1-201ENST00000406262 551 ntBASIC2.61□□□□□ -1.99
SLC44A3Q8N4M1 MIR1289-2-201ENST00000408360 111 ntBASIC2.61□□□□□ -1.99
SLC44A3Q8N4M1 AL591806.2-201ENST00000433122 173 ntBASIC2.61□□□□□ -1.99
SLC44A3Q8N4M1 RPS27AP9-201ENST00000477681 438 ntBASIC2.61□□□□□ -1.99
SLC44A3Q8N4M1 SNORA9.3-201ENST00000516383 129 ntBASIC2.61□□□□□ -1.99
SLC44A3Q8N4M1 RNU6-1098P-201ENST00000516772 96 ntBASIC2.61□□□□□ -1.99
SLC44A3Q8N4M1 HSPE1P18-201ENST00000517602 280 ntBASIC2.61□□□□□ -1.99
SLC44A3Q8N4M1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.61□□□□□ -1.99
SLC44A3Q8N4M1 DEFB122-202ENST00000569013 197 ntBASIC2.61□□□□□ -1.99
SLC44A3Q8N4M1 AC103810.1-201ENST00000579873 453 ntBASIC2.61□□□□□ -1.99
SLC44A3Q8N4M1 RPL30P11-203ENST00000598995 310 ntBASIC2.61□□□□□ -1.99
SLC44A3Q8N4M1 AC110079.1-202ENST00000635213 138 ntBASIC2.61□□□□□ -1.99
SLC44A3Q8N4M1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SLC44A3Q8N4M1 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
SLC44A3Q8N4M1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SLC44A3Q8N4M1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SLC44A3Q8N4M1 RNU6-1048P-201ENST00000364054 107 ntBASIC2.6□□□□□ -1.99
SLC44A3Q8N4M1 RNU4-84P-201ENST00000364200 139 ntBASIC2.6□□□□□ -1.99
SLC44A3Q8N4M1 RNU6-312P-201ENST00000364629 107 ntBASIC2.6□□□□□ -1.99
SLC44A3Q8N4M1 RNU6-81P-201ENST00000365608 104 ntBASIC2.6□□□□□ -1.99
SLC44A3Q8N4M1 MIR29B2-201ENST00000385055 81 ntBASIC2.6□□□□□ -1.99
SLC44A3Q8N4M1 MIR1185-2-201ENST00000408687 86 ntBASIC2.6□□□□□ -1.99
SLC44A3Q8N4M1 AC007064.1-201ENST00000412238 351 ntBASIC2.6□□□□□ -1.99
SLC44A3Q8N4M1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.6□□□□□ -1.99
SLC44A3Q8N4M1 AL356320.1-201ENST00000429616 163 ntBASIC2.6□□□□□ -1.99
SLC44A3Q8N4M1 AC005840.1-201ENST00000498412 377 ntBASIC2.6□□□□□ -1.99
SLC44A3Q8N4M1 RNU6-826P-201ENST00000516827 104 ntBASIC2.6□□□□□ -1.99
SLC44A3Q8N4M1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.6□□□□□ -1.99
SLC44A3Q8N4M1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.6□□□□□ -1.99
SLC44A3Q8N4M1 AC004832.4-201ENST00000608952 331 ntBASIC2.6□□□□□ -1.99
SLC44A3Q8N4M1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SLC44A3Q8N4M1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SLC44A3Q8N4M1 AC134026.1-201ENST00000623249 2239 ntBASIC2.6□□□□□ -1.99
SLC44A3Q8N4M1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
SLC44A3Q8N4M1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
SLC44A3Q8N4M1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SLC44A3Q8N4M1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SLC44A3Q8N4M1 snoU2_19.4-201ENST00000364329 80 ntBASIC2.59□□□□□ -1.99
SLC44A3Q8N4M1 Y_RNA.287-201ENST00000364853 94 ntBASIC2.59□□□□□ -1.99
SLC44A3Q8N4M1 Y_RNA.291-201ENST00000364886 113 ntBASIC2.59□□□□□ -1.99
SLC44A3Q8N4M1 RNU6-275P-201ENST00000364910 107 ntBASIC2.59□□□□□ -1.99
SLC44A3Q8N4M1 SNORD116-18-201ENST00000383961 92 ntBASIC2.59□□□□□ -1.99
SLC44A3Q8N4M1 Y_RNA.456-201ENST00000384232 111 ntBASIC2.59□□□□□ -1.99
SLC44A3Q8N4M1 AL359511.1-201ENST00000402970 211 ntBASIC2.59□□□□□ -1.99
SLC44A3Q8N4M1 RNU6-710P-201ENST00000410424 105 ntBASIC2.59□□□□□ -1.99
SLC44A3Q8N4M1 AL606753.1-201ENST00000427435 87 ntBASIC2.59□□□□□ -1.99
SLC44A3Q8N4M1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.59□□□□□ -1.99
SLC44A3Q8N4M1 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.59□□□□□ -1.99
SLC44A3Q8N4M1 RAC1P5-201ENST00000512182 576 ntBASIC2.59□□□□□ -1.99
SLC44A3Q8N4M1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.59□□□□□ -1.99
SLC44A3Q8N4M1 MIR4765-201ENST00000585007 77 ntBASIC2.59□□□□□ -1.99
SLC44A3Q8N4M1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.59□□□□□ -1.99
SLC44A3Q8N4M1 MTND1P7-201ENST00000632801 297 ntBASIC2.59□□□□□ -1.99
SLC44A3Q8N4M1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SLC44A3Q8N4M1 RNU6-944P-201ENST00000364023 107 ntBASIC2.58□□□□□ -2
SLC44A3Q8N4M1 SNORD21-201ENST00000383953 95 ntBASIC2.58□□□□□ -2
SLC44A3Q8N4M1 RNU6-1083P-201ENST00000384022 107 ntBASIC2.58□□□□□ -2
SLC44A3Q8N4M1 RNU6-1274P-201ENST00000384557 107 ntBASIC2.58□□□□□ -2
SLC44A3Q8N4M1 MIR764-201ENST00000390811 85 ntBASIC2.58□□□□□ -2
SLC44A3Q8N4M1 SNORA40.19-201ENST00000390846 128 ntBASIC2.58□□□□□ -2
SLC44A3Q8N4M1 FO393413.1-201ENST00000402892 195 ntBASIC2.58□□□□□ -2
SLC44A3Q8N4M1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.58□□□□□ -2
SLC44A3Q8N4M1 SEPT7P4-201ENST00000437076 306 ntBASIC2.58□□□□□ -2
SLC44A3Q8N4M1 MRPS36P2-201ENST00000512569 299 ntBASIC2.58□□□□□ -2
SLC44A3Q8N4M1 RNA5SP112-201ENST00000515937 99 ntBASIC2.58□□□□□ -2
SLC44A3Q8N4M1 AC025754.2-201ENST00000606491 432 ntBASIC2.58□□□□□ -2
SLC44A3Q8N4M1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
SLC44A3Q8N4M1 AL159152.1-201ENST00000635019 2587 ntBASIC2.57□□□□□ -2
SLC44A3Q8N4M1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
SLC44A3Q8N4M1 SNORD114-7-201ENST00000362520 77 ntBASIC2.57□□□□□ -2
SLC44A3Q8N4M1 Y_RNA.124-201ENST00000363339 93 ntBASIC2.57□□□□□ -2
SLC44A3Q8N4M1 Y_RNA.172-201ENST00000363765 102 ntBASIC2.57□□□□□ -2
SLC44A3Q8N4M1 Y_RNA.182-201ENST00000363880 111 ntBASIC2.57□□□□□ -2
SLC44A3Q8N4M1 RNU6-1305P-201ENST00000364353 104 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms