Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RNU6-1100P-201ENST00000410691 104 ntBASIC-1.38□□□□□ -2.63
VPS8Q8N3P4 RNU6-860P-201ENST00000410860 104 ntBASIC-1.38□□□□□ -2.63
VPS8Q8N3P4 RNU6-1217P-201ENST00000411276 104 ntBASIC-1.38□□□□□ -2.63
VPS8Q8N3P4 RNU6-785P-201ENST00000411324 104 ntBASIC-1.38□□□□□ -2.63
VPS8Q8N3P4 RNU6-469P-201ENST00000516253 101 ntBASIC-1.38□□□□□ -2.63
VPS8Q8N3P4 RNU7-43P-201ENST00000516554 64 ntBASIC-1.38□□□□□ -2.63
VPS8Q8N3P4 AL512347.1-201ENST00000566420 503 ntBASIC-1.38□□□□□ -2.63
VPS8Q8N3P4 MIR5692A1-201ENST00000580523 69 ntBASIC-1.38□□□□□ -2.63
VPS8Q8N3P4 U6.90-201ENST00000614007 104 ntBASIC-1.38□□□□□ -2.63
VPS8Q8N3P4 U6.70-201ENST00000620287 104 ntBASIC-1.38□□□□□ -2.63
VPS8Q8N3P4 AL008636.1-201ENST00000625038 1018 ntBASIC-1.38□□□□□ -2.63
VPS8Q8N3P4 RNU6-428P-201ENST00000362942 107 ntBASIC-1.39□□□□□ -2.63
VPS8Q8N3P4 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.39□□□□□ -2.63
VPS8Q8N3P4 SNORD32A-201ENST00000364805 84 ntBASIC-1.39□□□□□ -2.63
VPS8Q8N3P4 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.39□□□□□ -2.63
VPS8Q8N3P4 RNU6-364P-201ENST00000384387 107 ntBASIC-1.39□□□□□ -2.63
VPS8Q8N3P4 MIR562-201ENST00000384894 95 ntBASIC-1.39□□□□□ -2.63
VPS8Q8N3P4 MIR586-201ENST00000385035 97 ntBASIC-1.39□□□□□ -2.63
VPS8Q8N3P4 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.39□□□□□ -2.63
VPS8Q8N3P4 MIR1302-7-201ENST00000408841 72 ntBASIC-1.39□□□□□ -2.63
VPS8Q8N3P4 AL158050.1-201ENST00000416077 457 ntBASIC-1.39□□□□□ -2.63
VPS8Q8N3P4 MTND4LP7-201ENST00000431728 294 ntBASIC-1.39□□□□□ -2.63
VPS8Q8N3P4 AC119618.1-201ENST00000434191 222 ntBASIC-1.39□□□□□ -2.63
VPS8Q8N3P4 RNU6-63P-201ENST00000516690 95 ntBASIC-1.39□□□□□ -2.63
VPS8Q8N3P4 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.39□□□□□ -2.63
VPS8Q8N3P4 SNORD38B-202ENST00000625943 69 ntBASIC-1.39□□□□□ -2.63
VPS8Q8N3P4 MIRLET7C-201ENST00000362160 84 ntBASIC-1.4□□□□□ -2.63
VPS8Q8N3P4 AL355143.1-201ENST00000407101 841 ntBASIC-1.4□□□□□ -2.63
VPS8Q8N3P4 AC244250.2-201ENST00000418731 148 ntBASIC-1.4□□□□□ -2.63
VPS8Q8N3P4 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-1.4□□□□□ -2.63
VPS8Q8N3P4 AC008628.2-201ENST00000502605 298 ntBASIC-1.4□□□□□ -2.63
VPS8Q8N3P4 RNA5SP216-201ENST00000516111 123 ntBASIC-1.4□□□□□ -2.63
VPS8Q8N3P4 RNU6-881P-201ENST00000516813 102 ntBASIC-1.4□□□□□ -2.63
VPS8Q8N3P4 RNU6-706P-201ENST00000517229 104 ntBASIC-1.4□□□□□ -2.63
VPS8Q8N3P4 MIR16-2-201ENST00000362117 81 ntBASIC-1.4□□□□□ -2.63
VPS8Q8N3P4 RNU6-116P-201ENST00000384042 109 ntBASIC-1.4□□□□□ -2.63
VPS8Q8N3P4 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.4□□□□□ -2.63
VPS8Q8N3P4 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.4□□□□□ -2.63
VPS8Q8N3P4 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-1.4□□□□□ -2.63
VPS8Q8N3P4 RNU6-58P-201ENST00000517143 103 ntBASIC-1.4□□□□□ -2.63
VPS8Q8N3P4 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-1.4□□□□□ -2.63
VPS8Q8N3P4 MTND2P38-201ENST00000522536 667 ntBASIC-1.4□□□□□ -2.63
VPS8Q8N3P4 MIR7107-201ENST00000611489 80 ntBASIC-1.4□□□□□ -2.63
VPS8Q8N3P4 RNU6-221P-201ENST00000459541 99 ntBASIC-1.41□□□□□ -2.64
VPS8Q8N3P4 AC026470.2-201ENST00000561492 181 ntBASIC-1.41□□□□□ -2.64
VPS8Q8N3P4 MIR5708-201ENST00000579723 85 ntBASIC-1.41□□□□□ -2.64
VPS8Q8N3P4 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-1.41□□□□□ -2.64
VPS8Q8N3P4 AL139286.2-201ENST00000606838 396 ntBASIC-1.41□□□□□ -2.64
VPS8Q8N3P4 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.42□□□□□ -2.64
VPS8Q8N3P4 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.42□□□□□ -2.64
VPS8Q8N3P4 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-1.42□□□□□ -2.64
VPS8Q8N3P4 RNY4P37-201ENST00000516225 96 ntBASIC-1.42□□□□□ -2.64
VPS8Q8N3P4 RNU6-1116P-201ENST00000517269 99 ntBASIC-1.42□□□□□ -2.64
VPS8Q8N3P4 AL596327.1-201ENST00000603629 213 ntBASIC-1.42□□□□□ -2.64
VPS8Q8N3P4 AC020891.4-201ENST00000605745 93 ntBASIC-1.42□□□□□ -2.64
VPS8Q8N3P4 SCARNA4-201ENST00000629045 128 ntBASIC-1.42□□□□□ -2.64
VPS8Q8N3P4 ZNF204P-201ENST00000416749 2397 ntBASIC-1.43□□□□□ -2.64
VPS8Q8N3P4 RNU6-580P-201ENST00000365159 107 ntBASIC-1.43□□□□□ -2.64
VPS8Q8N3P4 RNY3P13-201ENST00000365542 102 ntBASIC-1.43□□□□□ -2.64
VPS8Q8N3P4 AL590002.1-201ENST00000406554 418 ntBASIC-1.43□□□□□ -2.64
VPS8Q8N3P4 MIR1207-201ENST00000408249 87 ntBASIC-1.43□□□□□ -2.64
VPS8Q8N3P4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.43□□□□□ -2.64
VPS8Q8N3P4 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-1.43□□□□□ -2.64
VPS8Q8N3P4 RNU6-123P-201ENST00000516163 102 ntBASIC-1.43□□□□□ -2.64
VPS8Q8N3P4 RNU2-10P-201ENST00000516375 211 ntBASIC-1.43□□□□□ -2.64
VPS8Q8N3P4 AC104072.1-201ENST00000568817 668 ntBASIC-1.43□□□□□ -2.64
VPS8Q8N3P4 AC006380.1-201ENST00000603598 186 ntBASIC-1.43□□□□□ -2.64
VPS8Q8N3P4 AL078596.1-201ENST00000624856 447 ntBASIC-1.43□□□□□ -2.64
VPS8Q8N3P4 MIR4251-201ENST00000635819 61 ntBASIC-1.43□□□□□ -2.64
VPS8Q8N3P4 RNU6-777P-201ENST00000364265 104 ntBASIC-1.44□□□□□ -2.64
VPS8Q8N3P4 MIR136-201ENST00000385207 82 ntBASIC-1.44□□□□□ -2.64
VPS8Q8N3P4 RPL21P38-201ENST00000418090 167 ntBASIC-1.44□□□□□ -2.64
VPS8Q8N3P4 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-1.44□□□□□ -2.64
VPS8Q8N3P4 AC079781.2-201ENST00000446424 169 ntBASIC-1.44□□□□□ -2.64
VPS8Q8N3P4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-1.44□□□□□ -2.64
VPS8Q8N3P4 AC021146.9-201ENST00000512503 156 ntBASIC-1.44□□□□□ -2.64
VPS8Q8N3P4 CR383656.4-201ENST00000546909 122 ntBASIC-1.44□□□□□ -2.64
VPS8Q8N3P4 AC006441.5-201ENST00000612680 209 ntBASIC-1.44□□□□□ -2.64
VPS8Q8N3P4 RNY4P6-201ENST00000363667 96 ntBASIC-1.45□□□□□ -2.64
VPS8Q8N3P4 RNU4-36P-201ENST00000364294 144 ntBASIC-1.45□□□□□ -2.64
VPS8Q8N3P4 U8.5-201ENST00000364528 136 ntBASIC-1.45□□□□□ -2.64
VPS8Q8N3P4 SUMO1P2-201ENST00000452524 304 ntBASIC-1.45□□□□□ -2.64
VPS8Q8N3P4 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-1.45□□□□□ -2.64
VPS8Q8N3P4 SNORA18.7-201ENST00000516910 131 ntBASIC-1.45□□□□□ -2.64
VPS8Q8N3P4 MIR1246-201ENST00000636535 73 ntBASIC-1.45□□□□□ -2.64
VPS8Q8N3P4 MTND4P9-201ENST00000507819 1346 ntBASIC-1.46□□□□□ -2.64
VPS8Q8N3P4 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.46□□□□□ -2.64
VPS8Q8N3P4 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.46□□□□□ -2.64
VPS8Q8N3P4 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.46□□□□□ -2.64
VPS8Q8N3P4 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.46□□□□□ -2.64
VPS8Q8N3P4 Y_RNA.267-201ENST00000364679 109 ntBASIC-1.46□□□□□ -2.64
VPS8Q8N3P4 SNORA36A-201ENST00000384221 132 ntBASIC-1.46□□□□□ -2.64
VPS8Q8N3P4 AL512326.2-201ENST00000426359 151 ntBASIC-1.46□□□□□ -2.64
VPS8Q8N3P4 AC009237.7-201ENST00000447357 229 ntBASIC-1.46□□□□□ -2.64
VPS8Q8N3P4 AL360271.2-201ENST00000447710 161 ntBASIC-1.46□□□□□ -2.64
VPS8Q8N3P4 AC027279.3-201ENST00000625055 122 ntBASIC-1.46□□□□□ -2.64
VPS8Q8N3P4 MIR101-2-201ENST00000362195 79 ntBASIC-1.47□□□□□ -2.64
VPS8Q8N3P4 RNU6-371P-201ENST00000364283 108 ntBASIC-1.47□□□□□ -2.64
VPS8Q8N3P4 RNU6-650P-201ENST00000365658 111 ntBASIC-1.47□□□□□ -2.64
VPS8Q8N3P4 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 243.5 ms