Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 Y_RNA.590-201ENST00000410140 107 ntBASIC2.09□□□□□ -2.07
CLIP4Q8N3C7 RNU2-48P-201ENST00000410694 191 ntBASIC2.09□□□□□ -2.07
CLIP4Q8N3C7 AC016925.1-201ENST00000458303 298 ntBASIC2.09□□□□□ -2.07
CLIP4Q8N3C7 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.09□□□□□ -2.07
CLIP4Q8N3C7 RNU6-138P-201ENST00000515952 107 ntBASIC2.09□□□□□ -2.07
CLIP4Q8N3C7 RNU6-948P-201ENST00000516374 107 ntBASIC2.09□□□□□ -2.07
CLIP4Q8N3C7 Y_RNA.679-201ENST00000516416 91 ntBASIC2.09□□□□□ -2.07
CLIP4Q8N3C7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.09□□□□□ -2.07
CLIP4Q8N3C7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.09□□□□□ -2.07
CLIP4Q8N3C7 AC130289.1-201ENST00000577321 73 ntBASIC2.09□□□□□ -2.07
CLIP4Q8N3C7 AC005828.6-201ENST00000606610 232 ntBASIC2.09□□□□□ -2.07
CLIP4Q8N3C7 snoZ196.1-201ENST00000625269 89 ntBASIC2.09□□□□□ -2.07
CLIP4Q8N3C7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.08
CLIP4Q8N3C7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CLIP4Q8N3C7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
CLIP4Q8N3C7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.08□□□□□ -2.08
CLIP4Q8N3C7 RNA5SP289-201ENST00000362332 137 ntBASIC2.08□□□□□ -2.08
CLIP4Q8N3C7 RNA5SP138-201ENST00000365098 114 ntBASIC2.08□□□□□ -2.08
CLIP4Q8N3C7 SNORA25B-201ENST00000365507 128 ntBASIC2.08□□□□□ -2.08
CLIP4Q8N3C7 RNU6-1248P-201ENST00000391096 64 ntBASIC2.08□□□□□ -2.08
CLIP4Q8N3C7 SNORA11.2-201ENST00000408318 127 ntBASIC2.08□□□□□ -2.08
CLIP4Q8N3C7 RNU2-61P-201ENST00000411069 191 ntBASIC2.08□□□□□ -2.08
CLIP4Q8N3C7 RNU6-57P-201ENST00000411348 103 ntBASIC2.08□□□□□ -2.08
CLIP4Q8N3C7 AC024067.1-201ENST00000426199 223 ntBASIC2.08□□□□□ -2.08
CLIP4Q8N3C7 MTND5P15-201ENST00000434246 349 ntBASIC2.08□□□□□ -2.08
CLIP4Q8N3C7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.08□□□□□ -2.08
CLIP4Q8N3C7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.08□□□□□ -2.08
CLIP4Q8N3C7 RNU6-717P-201ENST00000459076 104 ntBASIC2.08□□□□□ -2.08
CLIP4Q8N3C7 RNA5SP24-201ENST00000516478 95 ntBASIC2.08□□□□□ -2.08
CLIP4Q8N3C7 MIR4672-201ENST00000583126 81 ntBASIC2.08□□□□□ -2.08
CLIP4Q8N3C7 AC025754.2-201ENST00000606491 432 ntBASIC2.08□□□□□ -2.08
CLIP4Q8N3C7 AC013412.1-201ENST00000610687 192 ntBASIC2.08□□□□□ -2.08
CLIP4Q8N3C7 AL136360.1-201ENST00000503377 1900 ntBASIC2.08□□□□□ -2.08
CLIP4Q8N3C7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
CLIP4Q8N3C7 Y_RNA.200-201ENST00000364018 102 ntBASIC2.07□□□□□ -2.08
CLIP4Q8N3C7 RNU1-148P-201ENST00000384472 162 ntBASIC2.07□□□□□ -2.08
CLIP4Q8N3C7 MIR1298-201ENST00000408783 112 ntBASIC2.07□□□□□ -2.08
CLIP4Q8N3C7 AL139156.1-201ENST00000412785 841 ntBASIC2.07□□□□□ -2.08
CLIP4Q8N3C7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.07□□□□□ -2.08
CLIP4Q8N3C7 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.07□□□□□ -2.08
CLIP4Q8N3C7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.07□□□□□ -2.08
CLIP4Q8N3C7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CLIP4Q8N3C7 RPL23AP94-201ENST00000512518 302 ntBASIC2.07□□□□□ -2.08
CLIP4Q8N3C7 RNU6-991P-201ENST00000516168 107 ntBASIC2.07□□□□□ -2.08
CLIP4Q8N3C7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.07□□□□□ -2.08
CLIP4Q8N3C7 MIR4513-201ENST00000581077 86 ntBASIC2.07□□□□□ -2.08
CLIP4Q8N3C7 MIR3162-201ENST00000581818 82 ntBASIC2.07□□□□□ -2.08
CLIP4Q8N3C7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.07□□□□□ -2.08
CLIP4Q8N3C7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 Y_RNA.82-201ENST00000363000 102 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 Y_RNA.92-201ENST00000363043 102 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 SNORA38-201ENST00000363946 132 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 Y_RNA.217-201ENST00000364214 105 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 Y_RNA.235-201ENST00000364412 102 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 Y_RNA.274-201ENST00000364714 101 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 Y_RNA.292-201ENST00000364904 97 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 Y_RNA.306-201ENST00000365015 102 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 Y_RNA.312-201ENST00000365089 102 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 Y_RNA.322-201ENST00000365151 102 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 RNA5SP37-201ENST00000365420 130 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 AC009238.1-201ENST00000442165 424 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 AC009237.6-201ENST00000446969 424 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 AL137159.1-201ENST00000452808 512 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 Y_RNA.650-201ENST00000459002 102 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 Y_RNA.641-201ENST00000459414 105 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 RNU6-221P-201ENST00000459541 99 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 AC093259.1-201ENST00000509755 300 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 SNORD116-28-201ENST00000516123 91 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 RNA5SP281-201ENST00000516504 135 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 Y_RNA.777-201ENST00000516982 102 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 RNU6-667P-201ENST00000517186 102 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 MIR3684-201ENST00000579779 74 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 MIR4282-201ENST00000583613 67 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 Y_RNA.771-201ENST00000598668 102 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 Y_RNA.789-201ENST00000622480 102 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 snoU18.1-201ENST00000629629 71 ntBASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
CLIP4Q8N3C7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
CLIP4Q8N3C7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CLIP4Q8N3C7 Y_RNA.83-201ENST00000363005 113 ntBASIC2.05□□□□□ -2.08
CLIP4Q8N3C7 Y_RNA.199-201ENST00000364014 102 ntBASIC2.05□□□□□ -2.08
CLIP4Q8N3C7 Y_RNA.297-201ENST00000364950 91 ntBASIC2.05□□□□□ -2.08
CLIP4Q8N3C7 RNY4P28-201ENST00000365281 93 ntBASIC2.05□□□□□ -2.08
CLIP4Q8N3C7 RNU6-1235P-201ENST00000384559 107 ntBASIC2.05□□□□□ -2.08
CLIP4Q8N3C7 SNORA67.4-201ENST00000384688 142 ntBASIC2.05□□□□□ -2.08
CLIP4Q8N3C7 MIR221-201ENST00000385135 110 ntBASIC2.05□□□□□ -2.08
CLIP4Q8N3C7 MIR524-201ENST00000385242 87 ntBASIC2.05□□□□□ -2.08
CLIP4Q8N3C7 AL355796.1-201ENST00000406706 323 ntBASIC2.05□□□□□ -2.08
CLIP4Q8N3C7 AC123900.1-201ENST00000420390 96 ntBASIC2.05□□□□□ -2.08
CLIP4Q8N3C7 Y_RNA.638-201ENST00000459374 113 ntBASIC2.05□□□□□ -2.08
CLIP4Q8N3C7 RNU6-498P-201ENST00000459468 107 ntBASIC2.05□□□□□ -2.08
CLIP4Q8N3C7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.05□□□□□ -2.08
CLIP4Q8N3C7 AC002984.1-201ENST00000591692 448 ntBASIC2.05□□□□□ -2.08
CLIP4Q8N3C7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.05□□□□□ -2.08
CLIP4Q8N3C7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CLIP4Q8N3C7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms