Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VRK3Q8IV63 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.62□□□□□ -1.99
VRK3Q8IV63 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VRK3Q8IV63 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.61□□□□□ -1.99
VRK3Q8IV63 RNU6-834P-201ENST00000362367 110 ntBASIC2.61□□□□□ -1.99
VRK3Q8IV63 RNU6-407P-201ENST00000365280 104 ntBASIC2.61□□□□□ -1.99
VRK3Q8IV63 RNU6-80P-201ENST00000384195 107 ntBASIC2.61□□□□□ -1.99
VRK3Q8IV63 RNA5SP252-201ENST00000391131 119 ntBASIC2.61□□□□□ -1.99
VRK3Q8IV63 RNU1-101P-201ENST00000391171 127 ntBASIC2.61□□□□□ -1.99
VRK3Q8IV63 MIR873-201ENST00000401120 77 ntBASIC2.61□□□□□ -1.99
VRK3Q8IV63 AL139095.1-201ENST00000404326 391 ntBASIC2.61□□□□□ -1.99
VRK3Q8IV63 AL606845.1-201ENST00000404881 255 ntBASIC2.61□□□□□ -1.99
VRK3Q8IV63 AL355796.1-201ENST00000406706 323 ntBASIC2.61□□□□□ -1.99
VRK3Q8IV63 SNORD88.1-201ENST00000408684 91 ntBASIC2.61□□□□□ -1.99
VRK3Q8IV63 AC006461.1-201ENST00000412637 326 ntBASIC2.61□□□□□ -1.99
VRK3Q8IV63 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.61□□□□□ -1.99
VRK3Q8IV63 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.61□□□□□ -1.99
VRK3Q8IV63 AP001486.1-201ENST00000463339 476 ntBASIC2.61□□□□□ -1.99
VRK3Q8IV63 HMGN2P9-201ENST00000476875 229 ntBASIC2.61□□□□□ -1.99
VRK3Q8IV63 AC092991.1-201ENST00000477176 376 ntBASIC2.61□□□□□ -1.99
VRK3Q8IV63 RN7SL297P-201ENST00000483161 293 ntBASIC2.61□□□□□ -1.99
VRK3Q8IV63 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.61□□□□□ -1.99
VRK3Q8IV63 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.61□□□□□ -1.99
VRK3Q8IV63 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.61□□□□□ -1.99
VRK3Q8IV63 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.61□□□□□ -1.99
VRK3Q8IV63 MIR4635-201ENST00000583759 79 ntBASIC2.61□□□□□ -1.99
VRK3Q8IV63 AL359881.1-201ENST00000602916 267 ntBASIC2.61□□□□□ -1.99
VRK3Q8IV63 AP003357.1-201ENST00000604497 148 ntBASIC2.61□□□□□ -1.99
VRK3Q8IV63 AC092435.3-201ENST00000565538 3654 ntBASIC2.61□□□□□ -1.99
VRK3Q8IV63 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.61□□□□□ -1.99
VRK3Q8IV63 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VRK3Q8IV63 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VRK3Q8IV63 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VRK3Q8IV63 RNU6-199P-201ENST00000362954 107 ntBASIC2.6□□□□□ -1.99
VRK3Q8IV63 RNU6-1305P-201ENST00000364353 104 ntBASIC2.6□□□□□ -1.99
VRK3Q8IV63 RNU6-1323P-201ENST00000384025 107 ntBASIC2.6□□□□□ -1.99
VRK3Q8IV63 RNY3P5-201ENST00000384127 102 ntBASIC2.6□□□□□ -1.99
VRK3Q8IV63 Y_RNA.563-201ENST00000384707 108 ntBASIC2.6□□□□□ -1.99
VRK3Q8IV63 MIR9-1-201ENST00000385198 89 ntBASIC2.6□□□□□ -1.99
VRK3Q8IV63 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.6□□□□□ -1.99
VRK3Q8IV63 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.6□□□□□ -1.99
VRK3Q8IV63 EIF4EP4-201ENST00000424916 578 ntBASIC2.6□□□□□ -1.99
VRK3Q8IV63 RPL23AP7-203ENST00000449021 469 ntBASIC2.6□□□□□ -1.99
VRK3Q8IV63 AC108938.1-201ENST00000451204 136 ntBASIC2.6□□□□□ -1.99
VRK3Q8IV63 SNORD109B-201ENST00000458961 67 ntBASIC2.6□□□□□ -1.99
VRK3Q8IV63 SNORD109A-201ENST00000459128 67 ntBASIC2.6□□□□□ -1.99
VRK3Q8IV63 AL049873.1-201ENST00000480540 376 ntBASIC2.6□□□□□ -1.99
VRK3Q8IV63 RPL36AP21-201ENST00000490372 323 ntBASIC2.6□□□□□ -1.99
VRK3Q8IV63 RNU7-115P-201ENST00000516433 55 ntBASIC2.6□□□□□ -1.99
VRK3Q8IV63 RNU6-919P-201ENST00000516731 104 ntBASIC2.6□□□□□ -1.99
VRK3Q8IV63 RNU6-1098P-201ENST00000516772 96 ntBASIC2.6□□□□□ -1.99
VRK3Q8IV63 RNU6-826P-201ENST00000516827 104 ntBASIC2.6□□□□□ -1.99
VRK3Q8IV63 RNU6-1234P-201ENST00000516877 103 ntBASIC2.6□□□□□ -1.99
VRK3Q8IV63 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
VRK3Q8IV63 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.6□□□□□ -1.99
VRK3Q8IV63 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
VRK3Q8IV63 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.59□□□□□ -1.99
VRK3Q8IV63 Y_RNA.124-201ENST00000363339 93 ntBASIC2.59□□□□□ -1.99
VRK3Q8IV63 Y_RNA.251-201ENST00000364551 99 ntBASIC2.59□□□□□ -1.99
VRK3Q8IV63 SNORA36B-201ENST00000410438 131 ntBASIC2.59□□□□□ -1.99
VRK3Q8IV63 AC097463.2-201ENST00000421074 142 ntBASIC2.59□□□□□ -1.99
VRK3Q8IV63 AL035461.1-201ENST00000421490 332 ntBASIC2.59□□□□□ -1.99
VRK3Q8IV63 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.59□□□□□ -1.99
VRK3Q8IV63 RNA5SP356-201ENST00000515972 94 ntBASIC2.59□□□□□ -1.99
VRK3Q8IV63 RNU4-57P-201ENST00000515980 135 ntBASIC2.59□□□□□ -1.99
VRK3Q8IV63 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.59□□□□□ -1.99
VRK3Q8IV63 MIR4319-201ENST00000577285 85 ntBASIC2.59□□□□□ -1.99
VRK3Q8IV63 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.59□□□□□ -1.99
VRK3Q8IV63 MIR548AY-201ENST00000617669 107 ntBASIC2.59□□□□□ -1.99
VRK3Q8IV63 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
VRK3Q8IV63 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.59□□□□□ -2
VRK3Q8IV63 MAPK10-266ENST00000641066 6555 ntBASIC2.58□□□□□ -2
VRK3Q8IV63 CENPCP1-201ENST00000533085 2578 ntBASIC2.58□□□□□ -2
VRK3Q8IV63 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.58□□□□□ -2
VRK3Q8IV63 ZNF702P-202ENST00000434269 1966 ntBASIC2.58□□□□□ -2
VRK3Q8IV63 RNU6-728P-201ENST00000365375 104 ntBASIC2.58□□□□□ -2
VRK3Q8IV63 Y_RNA.393-201ENST00000383936 102 ntBASIC2.58□□□□□ -2
VRK3Q8IV63 SNORA20B-201ENST00000384220 132 ntBASIC2.58□□□□□ -2
VRK3Q8IV63 RNU6-768P-201ENST00000384683 107 ntBASIC2.58□□□□□ -2
VRK3Q8IV63 MIR29B2-201ENST00000385055 81 ntBASIC2.58□□□□□ -2
VRK3Q8IV63 MIR300-201ENST00000401138 83 ntBASIC2.58□□□□□ -2
VRK3Q8IV63 RNU6-383P-201ENST00000410864 94 ntBASIC2.58□□□□□ -2
VRK3Q8IV63 AL121890.1-201ENST00000435457 205 ntBASIC2.58□□□□□ -2
VRK3Q8IV63 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.58□□□□□ -2
VRK3Q8IV63 RNU6-1211P-201ENST00000459179 105 ntBASIC2.58□□□□□ -2
VRK3Q8IV63 AC117454.1-201ENST00000491120 168 ntBASIC2.58□□□□□ -2
VRK3Q8IV63 RNU6-659P-201ENST00000516454 104 ntBASIC2.58□□□□□ -2
VRK3Q8IV63 RNU6-1337P-201ENST00000516525 95 ntBASIC2.58□□□□□ -2
VRK3Q8IV63 AC023043.3-201ENST00000593113 385 ntBASIC2.58□□□□□ -2
VRK3Q8IV63 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.58□□□□□ -2
VRK3Q8IV63 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.57□□□□□ -2
VRK3Q8IV63 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.57□□□□□ -2
VRK3Q8IV63 AC062016.1-201ENST00000355719 319 ntBASIC2.57□□□□□ -2
VRK3Q8IV63 MIR367-201ENST00000362299 68 ntBASIC2.57□□□□□ -2
VRK3Q8IV63 SNORA27.1-201ENST00000362604 124 ntBASIC2.57□□□□□ -2
VRK3Q8IV63 RNY1P11-201ENST00000363759 113 ntBASIC2.57□□□□□ -2
VRK3Q8IV63 RNU6-674P-201ENST00000363831 107 ntBASIC2.57□□□□□ -2
VRK3Q8IV63 RNU6-44P-201ENST00000384045 107 ntBASIC2.57□□□□□ -2
VRK3Q8IV63 RNA5SP210-201ENST00000391034 120 ntBASIC2.57□□□□□ -2
VRK3Q8IV63 SNORD37.2-201ENST00000391075 66 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms