Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AC022868.1-201ENST00000517767 391 ntBASIC1.73□□□□□ -2.13
NPHP3Q7Z494 AC068205.3-201ENST00000636385 468 ntBASIC1.73□□□□□ -2.13
NPHP3Q7Z494 RNU6-879P-201ENST00000364328 108 ntBASIC1.72□□□□□ -2.13
NPHP3Q7Z494 RNU5E-4P-201ENST00000364931 120 ntBASIC1.72□□□□□ -2.13
NPHP3Q7Z494 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.72□□□□□ -2.13
NPHP3Q7Z494 RNU7-169P-201ENST00000459456 61 ntBASIC1.72□□□□□ -2.13
NPHP3Q7Z494 RNU6-948P-201ENST00000516374 107 ntBASIC1.72□□□□□ -2.13
NPHP3Q7Z494 RNU6-856P-201ENST00000516959 98 ntBASIC1.72□□□□□ -2.13
NPHP3Q7Z494 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.72□□□□□ -2.13
NPHP3Q7Z494 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.72□□□□□ -2.13
NPHP3Q7Z494 MIR5094-201ENST00000578766 85 ntBASIC1.72□□□□□ -2.13
NPHP3Q7Z494 AL117336.2-201ENST00000602435 335 ntBASIC1.72□□□□□ -2.13
NPHP3Q7Z494 AC008873.1-201ENST00000625051 138 ntBASIC1.72□□□□□ -2.13
NPHP3Q7Z494 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
NPHP3Q7Z494 MTND5P10-201ENST00000603719 1809 ntBASIC1.72□□□□□ -2.13
NPHP3Q7Z494 RNU4-79P-201ENST00000362764 141 ntBASIC1.71□□□□□ -2.14
NPHP3Q7Z494 RNU6-997P-201ENST00000384725 107 ntBASIC1.71□□□□□ -2.14
NPHP3Q7Z494 Y_RNA.577-201ENST00000384794 101 ntBASIC1.71□□□□□ -2.14
NPHP3Q7Z494 MIR329-1-201ENST00000385028 80 ntBASIC1.71□□□□□ -2.14
NPHP3Q7Z494 MTCO2P27-201ENST00000420740 428 ntBASIC1.71□□□□□ -2.14
NPHP3Q7Z494 AF228730.4-201ENST00000421457 183 ntBASIC1.71□□□□□ -2.14
NPHP3Q7Z494 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.71□□□□□ -2.14
NPHP3Q7Z494 AC099677.2-201ENST00000436385 175 ntBASIC1.71□□□□□ -2.14
NPHP3Q7Z494 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.71□□□□□ -2.14
NPHP3Q7Z494 AC010409.1-201ENST00000487382 476 ntBASIC1.71□□□□□ -2.14
NPHP3Q7Z494 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.71□□□□□ -2.14
NPHP3Q7Z494 SNORA31.17-201ENST00000516953 127 ntBASIC1.71□□□□□ -2.14
NPHP3Q7Z494 RNU6-699P-201ENST00000517081 110 ntBASIC1.71□□□□□ -2.14
NPHP3Q7Z494 SUMO2P18-201ENST00000518873 252 ntBASIC1.71□□□□□ -2.14
NPHP3Q7Z494 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.71□□□□□ -2.14
NPHP3Q7Z494 AC010900.2-201ENST00000604508 210 ntBASIC1.71□□□□□ -2.14
NPHP3Q7Z494 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.71□□□□□ -2.14
NPHP3Q7Z494 AL357075.2-201ENST00000614906 189 ntBASIC1.71□□□□□ -2.14
NPHP3Q7Z494 AC006001.4-201ENST00000622243 395 ntBASIC1.71□□□□□ -2.14
NPHP3Q7Z494 AL008636.1-201ENST00000625038 1018 ntBASIC1.71□□□□□ -2.14
NPHP3Q7Z494 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.71□□□□□ -2.14
NPHP3Q7Z494 RNU6-862P-201ENST00000362804 105 ntBASIC1.7□□□□□ -2.14
NPHP3Q7Z494 RNU6-1040P-201ENST00000383974 107 ntBASIC1.7□□□□□ -2.14
NPHP3Q7Z494 RNU6-318P-201ENST00000384283 103 ntBASIC1.7□□□□□ -2.14
NPHP3Q7Z494 RNU6-1235P-201ENST00000384559 107 ntBASIC1.7□□□□□ -2.14
NPHP3Q7Z494 AC096644.2-201ENST00000429278 159 ntBASIC1.7□□□□□ -2.14
NPHP3Q7Z494 RNU7-152P-201ENST00000458982 64 ntBASIC1.7□□□□□ -2.14
NPHP3Q7Z494 RNU6-498P-201ENST00000459468 107 ntBASIC1.7□□□□□ -2.14
NPHP3Q7Z494 AC114982.1-201ENST00000469402 321 ntBASIC1.7□□□□□ -2.14
NPHP3Q7Z494 AC008834.1-201ENST00000511612 175 ntBASIC1.7□□□□□ -2.14
NPHP3Q7Z494 RNA5SP61-201ENST00000516453 100 ntBASIC1.7□□□□□ -2.14
NPHP3Q7Z494 Y_RNA.683-201ENST00000516508 93 ntBASIC1.7□□□□□ -2.14
NPHP3Q7Z494 SNORA44.1-201ENST00000517031 108 ntBASIC1.7□□□□□ -2.14
NPHP3Q7Z494 AC091144.1-201ENST00000519573 138 ntBASIC1.7□□□□□ -2.14
NPHP3Q7Z494 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.7□□□□□ -2.14
NPHP3Q7Z494 SUB1P4-201ENST00000566062 339 ntBASIC1.7□□□□□ -2.14
NPHP3Q7Z494 AC133104.2-201ENST00000615272 193 ntBASIC1.7□□□□□ -2.14
NPHP3Q7Z494 AC126177.8-201ENST00000618339 1015 ntBASIC1.7□□□□□ -2.14
NPHP3Q7Z494 AL359697.1-201ENST00000624879 587 ntBASIC1.7□□□□□ -2.14
NPHP3Q7Z494 Y_RNA.187-201ENST00000363918 113 ntBASIC1.69□□□□□ -2.14
NPHP3Q7Z494 Y_RNA.314-201ENST00000365114 102 ntBASIC1.69□□□□□ -2.14
NPHP3Q7Z494 RNU6-439P-201ENST00000384188 106 ntBASIC1.69□□□□□ -2.14
NPHP3Q7Z494 RNU6-1145P-201ENST00000384246 107 ntBASIC1.69□□□□□ -2.14
NPHP3Q7Z494 MIR30A-201ENST00000385092 71 ntBASIC1.69□□□□□ -2.14
NPHP3Q7Z494 SNORA69.1-201ENST00000390904 137 ntBASIC1.69□□□□□ -2.14
NPHP3Q7Z494 RN7SKP51-201ENST00000410781 304 ntBASIC1.69□□□□□ -2.14
NPHP3Q7Z494 AC114482.1-201ENST00000418010 247 ntBASIC1.69□□□□□ -2.14
NPHP3Q7Z494 AC011406.1-201ENST00000512440 370 ntBASIC1.69□□□□□ -2.14
NPHP3Q7Z494 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.69□□□□□ -2.14
NPHP3Q7Z494 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.69□□□□□ -2.14
NPHP3Q7Z494 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.69□□□□□ -2.14
NPHP3Q7Z494 snoZ196.1-201ENST00000625269 89 ntBASIC1.69□□□□□ -2.14
NPHP3Q7Z494 AC073544.1-201ENST00000600110 1595 ntBASIC1.69□□□□□ -2.14
NPHP3Q7Z494 RNU6-490P-201ENST00000362985 107 ntBASIC1.68□□□□□ -2.14
NPHP3Q7Z494 Y_RNA.146-201ENST00000363549 102 ntBASIC1.68□□□□□ -2.14
NPHP3Q7Z494 Y_RNA.419-201ENST00000384041 102 ntBASIC1.68□□□□□ -2.14
NPHP3Q7Z494 Y_RNA.463-201ENST00000384271 102 ntBASIC1.68□□□□□ -2.14
NPHP3Q7Z494 MIR625-201ENST00000385047 85 ntBASIC1.68□□□□□ -2.14
NPHP3Q7Z494 MT-TD-201ENST00000387419 68 ntBASIC1.68□□□□□ -2.14
NPHP3Q7Z494 Y_RNA.579-201ENST00000390939 94 ntBASIC1.68□□□□□ -2.14
NPHP3Q7Z494 Y_RNA.592-201ENST00000410274 109 ntBASIC1.68□□□□□ -2.14
NPHP3Q7Z494 AC016909.1-201ENST00000415916 166 ntBASIC1.68□□□□□ -2.14
NPHP3Q7Z494 AC236972.2-201ENST00000434979 310 ntBASIC1.68□□□□□ -2.14
NPHP3Q7Z494 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.68□□□□□ -2.14
NPHP3Q7Z494 RNU6-107P-201ENST00000516643 102 ntBASIC1.68□□□□□ -2.14
NPHP3Q7Z494 MIR3198-2-201ENST00000577868 80 ntBASIC1.68□□□□□ -2.14
NPHP3Q7Z494 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.68□□□□□ -2.14
NPHP3Q7Z494 AC104985.2-201ENST00000620598 500 ntBASIC1.68□□□□□ -2.14
NPHP3Q7Z494 MIR424-201ENST00000362227 98 ntBASIC1.67□□□□□ -2.14
NPHP3Q7Z494 RNU6-1301P-201ENST00000362724 104 ntBASIC1.67□□□□□ -2.14
NPHP3Q7Z494 U3.8-201ENST00000363675 217 ntBASIC1.67□□□□□ -2.14
NPHP3Q7Z494 RNU5F-3P-201ENST00000363767 117 ntBASIC1.67□□□□□ -2.14
NPHP3Q7Z494 Y_RNA.315-201ENST00000365117 102 ntBASIC1.67□□□□□ -2.14
NPHP3Q7Z494 AL117342.1-201ENST00000404861 406 ntBASIC1.67□□□□□ -2.14
NPHP3Q7Z494 Y_RNA.604-201ENST00000410574 102 ntBASIC1.67□□□□□ -2.14
NPHP3Q7Z494 CHEK2P4-201ENST00000450340 246 ntBASIC1.67□□□□□ -2.14
NPHP3Q7Z494 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.67□□□□□ -2.14
NPHP3Q7Z494 RNU2-34P-201ENST00000516534 121 ntBASIC1.67□□□□□ -2.14
NPHP3Q7Z494 AC025647.1-201ENST00000517879 253 ntBASIC1.67□□□□□ -2.14
NPHP3Q7Z494 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.67□□□□□ -2.14
NPHP3Q7Z494 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.67□□□□□ -2.14
NPHP3Q7Z494 SNORA33-201ENST00000363664 130 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 Y_RNA.496-201ENST00000384444 101 ntBASIC1.66□□□□□ -2.14
NPHP3Q7Z494 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
NPHP3Q7Z494 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms