Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RNU4-77P-201ENST00000516692 156 ntBASIC1.65□□□□□ -2.15
NUP54Q7Z3B4 RNA5SP437-201ENST00000517249 129 ntBASIC1.65□□□□□ -2.15
NUP54Q7Z3B4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.65□□□□□ -2.15
NUP54Q7Z3B4 DEFB122-202ENST00000569013 197 ntBASIC1.65□□□□□ -2.15
NUP54Q7Z3B4 MIR3122-201ENST00000577243 73 ntBASIC1.65□□□□□ -2.15
NUP54Q7Z3B4 MIR6845-201ENST00000613182 61 ntBASIC1.65□□□□□ -2.15
NUP54Q7Z3B4 AL606534.2-204ENST00000635008 178 ntBASIC1.65□□□□□ -2.15
NUP54Q7Z3B4 U6.108-201ENST00000637764 58 ntBASIC1.65□□□□□ -2.15
NUP54Q7Z3B4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
NUP54Q7Z3B4 SNORD33-201ENST00000362761 85 ntBASIC1.64□□□□□ -2.15
NUP54Q7Z3B4 SNORD42.2-201ENST00000365570 69 ntBASIC1.64□□□□□ -2.15
NUP54Q7Z3B4 SNORA20B-201ENST00000384220 132 ntBASIC1.64□□□□□ -2.15
NUP54Q7Z3B4 Y_RNA.460-201ENST00000384255 102 ntBASIC1.64□□□□□ -2.15
NUP54Q7Z3B4 MIR9-3-201ENST00000385084 90 ntBASIC1.64□□□□□ -2.15
NUP54Q7Z3B4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.64□□□□□ -2.15
NUP54Q7Z3B4 AC003989.2-201ENST00000440224 169 ntBASIC1.64□□□□□ -2.15
NUP54Q7Z3B4 JTBP1-201ENST00000441314 247 ntBASIC1.64□□□□□ -2.15
NUP54Q7Z3B4 SUMO1P2-201ENST00000452524 304 ntBASIC1.64□□□□□ -2.15
NUP54Q7Z3B4 Y_RNA.639-201ENST00000458981 102 ntBASIC1.64□□□□□ -2.15
NUP54Q7Z3B4 RPS26P45-201ENST00000471748 340 ntBASIC1.64□□□□□ -2.15
NUP54Q7Z3B4 SNORA40.14-201ENST00000516543 86 ntBASIC1.64□□□□□ -2.15
NUP54Q7Z3B4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.64□□□□□ -2.15
NUP54Q7Z3B4 MIR4255-201ENST00000579351 72 ntBASIC1.64□□□□□ -2.15
NUP54Q7Z3B4 MIR3618-201ENST00000580330 88 ntBASIC1.64□□□□□ -2.15
NUP54Q7Z3B4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.64□□□□□ -2.15
NUP54Q7Z3B4 uc_338.22-201ENST00000622722 187 ntBASIC1.64□□□□□ -2.15
NUP54Q7Z3B4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
NUP54Q7Z3B4 RNU6-961P-201ENST00000363893 105 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 RNU6-454P-201ENST00000364292 107 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 Y_RNA.419-201ENST00000384041 102 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 RNU6-926P-201ENST00000384075 107 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 RNU6-708P-201ENST00000384217 107 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 AL355796.1-201ENST00000406706 323 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 RPS20P15-201ENST00000412792 311 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 SDAD1P3-201ENST00000427380 333 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 HSPE1P9-201ENST00000440046 311 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 AL137792.2-201ENST00000443484 235 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 MRPS10P1-201ENST00000448483 130 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 HSPE1P24-201ENST00000450782 238 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 AL163195.1-201ENST00000496941 348 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 RNU7-99P-201ENST00000516271 62 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 MIR4419B-201ENST00000577260 68 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 AC024614.2-201ENST00000577584 372 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 MIR4659A-201ENST00000580269 81 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 MIR4438-201ENST00000585271 93 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 AC005828.6-201ENST00000606610 232 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 AC090971.5-201ENST00000621102 293 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 AC084768.2-201ENST00000622736 221 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 AL160413.1-201ENST00000622780 310 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 U6.115-201ENST00000636045 103 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 U6.92-201ENST00000636464 89 ntBASIC1.63□□□□□ -2.15
NUP54Q7Z3B4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
NUP54Q7Z3B4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
NUP54Q7Z3B4 RNU6-797P-201ENST00000363101 109 ntBASIC1.62□□□□□ -2.15
NUP54Q7Z3B4 RNY1P14-201ENST00000384426 108 ntBASIC1.62□□□□□ -2.15
NUP54Q7Z3B4 Y_RNA.535-201ENST00000384612 99 ntBASIC1.62□□□□□ -2.15
NUP54Q7Z3B4 AL160004.2-201ENST00000432935 350 ntBASIC1.62□□□□□ -2.15
NUP54Q7Z3B4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.62□□□□□ -2.15
NUP54Q7Z3B4 AC005908.1-201ENST00000468701 347 ntBASIC1.62□□□□□ -2.15
NUP54Q7Z3B4 AC010469.2-201ENST00000496412 480 ntBASIC1.62□□□□□ -2.15
NUP54Q7Z3B4 RPS29P11-201ENST00000496507 171 ntBASIC1.62□□□□□ -2.15
NUP54Q7Z3B4 RNA5SP445-201ENST00000515889 115 ntBASIC1.62□□□□□ -2.15
NUP54Q7Z3B4 RNU7-128P-201ENST00000517247 62 ntBASIC1.62□□□□□ -2.15
NUP54Q7Z3B4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.62□□□□□ -2.15
NUP54Q7Z3B4 AC023442.1-201ENST00000531247 422 ntBASIC1.62□□□□□ -2.15
NUP54Q7Z3B4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.62□□□□□ -2.15
NUP54Q7Z3B4 MIR5188-201ENST00000583467 113 ntBASIC1.62□□□□□ -2.15
NUP54Q7Z3B4 AC090574.1-201ENST00000623186 233 ntBASIC1.62□□□□□ -2.15
NUP54Q7Z3B4 MIR369-201ENST00000362155 70 ntBASIC1.61□□□□□ -2.15
NUP54Q7Z3B4 SNORA27.1-201ENST00000362604 124 ntBASIC1.61□□□□□ -2.15
NUP54Q7Z3B4 RNU6-271P-201ENST00000363858 105 ntBASIC1.61□□□□□ -2.15
NUP54Q7Z3B4 Y_RNA.243-201ENST00000364481 109 ntBASIC1.61□□□□□ -2.15
NUP54Q7Z3B4 SNORD48-201ENST00000364953 64 ntBASIC1.61□□□□□ -2.15
NUP54Q7Z3B4 RNU6-1186P-201ENST00000410429 97 ntBASIC1.61□□□□□ -2.15
NUP54Q7Z3B4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.61□□□□□ -2.15
NUP54Q7Z3B4 AC073910.1-201ENST00000445047 438 ntBASIC1.61□□□□□ -2.15
NUP54Q7Z3B4 RPS27P22-201ENST00000478056 241 ntBASIC1.61□□□□□ -2.15
NUP54Q7Z3B4 RNU6-475P-201ENST00000516073 104 ntBASIC1.61□□□□□ -2.15
NUP54Q7Z3B4 AC104984.5-201ENST00000586878 94 ntBASIC1.61□□□□□ -2.15
NUP54Q7Z3B4 SNORD58B-201ENST00000607313 66 ntBASIC1.61□□□□□ -2.15
NUP54Q7Z3B4 AC006157.1-201ENST00000611750 366 ntBASIC1.61□□□□□ -2.15
NUP54Q7Z3B4 AC004467.1-201ENST00000615678 330 ntBASIC1.61□□□□□ -2.15
NUP54Q7Z3B4 AC240442.1-201ENST00000616055 283 ntBASIC1.61□□□□□ -2.15
NUP54Q7Z3B4 AC010205.1-201ENST00000616668 449 ntBASIC1.61□□□□□ -2.15
NUP54Q7Z3B4 ZNF72P-201ENST00000425869 1908 ntBASIC1.61□□□□□ -2.15
NUP54Q7Z3B4 SNORD114-7-201ENST00000362520 77 ntBASIC1.6□□□□□ -2.15
NUP54Q7Z3B4 Y_RNA.526-201ENST00000384572 110 ntBASIC1.6□□□□□ -2.15
NUP54Q7Z3B4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.6□□□□□ -2.15
NUP54Q7Z3B4 AC097462.1-201ENST00000514125 324 ntBASIC1.6□□□□□ -2.15
NUP54Q7Z3B4 RNU6-250P-201ENST00000516958 103 ntBASIC1.6□□□□□ -2.15
NUP54Q7Z3B4 RNU2-12P-201ENST00000517216 168 ntBASIC1.6□□□□□ -2.15
NUP54Q7Z3B4 AC027419.1-201ENST00000522976 328 ntBASIC1.6□□□□□ -2.15
NUP54Q7Z3B4 AC023157.2-201ENST00000540596 141 ntBASIC1.6□□□□□ -2.15
NUP54Q7Z3B4 RPS29P30-201ENST00000600975 111 ntBASIC1.6□□□□□ -2.15
NUP54Q7Z3B4 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.6□□□□□ -2.15
NUP54Q7Z3B4 MIR7843-201ENST00000622274 79 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 768.3 ms