Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COLCA1Q6ZS62 Y_RNA.170-201ENST00000363746 110 ntBASIC2.23□□□□□ -2.05
COLCA1Q6ZS62 SNORA25.6-201ENST00000364121 118 ntBASIC2.23□□□□□ -2.05
COLCA1Q6ZS62 Y_RNA.368-201ENST00000365547 113 ntBASIC2.23□□□□□ -2.05
COLCA1Q6ZS62 SNORA72.4-201ENST00000384174 132 ntBASIC2.23□□□□□ -2.05
COLCA1Q6ZS62 Y_RNA.506-201ENST00000384494 102 ntBASIC2.23□□□□□ -2.05
COLCA1Q6ZS62 RNU5E-9P-201ENST00000411164 104 ntBASIC2.23□□□□□ -2.05
COLCA1Q6ZS62 AC063976.3-201ENST00000426849 329 ntBASIC2.23□□□□□ -2.05
COLCA1Q6ZS62 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.23□□□□□ -2.05
COLCA1Q6ZS62 RNA5SP356-201ENST00000515972 94 ntBASIC2.23□□□□□ -2.05
COLCA1Q6ZS62 SNORA31.11-201ENST00000516528 139 ntBASIC2.23□□□□□ -2.05
COLCA1Q6ZS62 RNU6-586P-201ENST00000517265 104 ntBASIC2.23□□□□□ -2.05
COLCA1Q6ZS62 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.23□□□□□ -2.05
COLCA1Q6ZS62 AC105245.1-201ENST00000581934 244 ntBASIC2.23□□□□□ -2.05
COLCA1Q6ZS62 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.23□□□□□ -2.05
COLCA1Q6ZS62 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
COLCA1Q6ZS62 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.23□□□□□ -2.05
COLCA1Q6ZS62 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COLCA1Q6ZS62 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
COLCA1Q6ZS62 AC134026.1-201ENST00000623249 2239 ntBASIC2.22□□□□□ -2.05
COLCA1Q6ZS62 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
COLCA1Q6ZS62 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COLCA1Q6ZS62 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.22□□□□□ -2.05
COLCA1Q6ZS62 SNORD14D-201ENST00000384390 87 ntBASIC2.22□□□□□ -2.05
COLCA1Q6ZS62 MIR95-201ENST00000385072 81 ntBASIC2.22□□□□□ -2.05
COLCA1Q6ZS62 RNU6-1248P-201ENST00000391096 64 ntBASIC2.22□□□□□ -2.05
COLCA1Q6ZS62 RNU2-48P-201ENST00000410694 191 ntBASIC2.22□□□□□ -2.05
COLCA1Q6ZS62 RNU6-394P-201ENST00000410735 107 ntBASIC2.22□□□□□ -2.05
COLCA1Q6ZS62 RNU6-1135P-201ENST00000411083 103 ntBASIC2.22□□□□□ -2.05
COLCA1Q6ZS62 AL392103.1-201ENST00000447000 198 ntBASIC2.22□□□□□ -2.05
COLCA1Q6ZS62 AC016717.1-201ENST00000448918 286 ntBASIC2.22□□□□□ -2.05
COLCA1Q6ZS62 RNU7-57P-201ENST00000459540 60 ntBASIC2.22□□□□□ -2.05
COLCA1Q6ZS62 Y_RNA.662-201ENST00000516028 97 ntBASIC2.22□□□□□ -2.05
COLCA1Q6ZS62 RNU6-965P-201ENST00000516721 96 ntBASIC2.22□□□□□ -2.05
COLCA1Q6ZS62 MTND5P41-201ENST00000517498 206 ntBASIC2.22□□□□□ -2.05
COLCA1Q6ZS62 PRELID2P1-201ENST00000552837 301 ntBASIC2.22□□□□□ -2.05
COLCA1Q6ZS62 SNORD14A-201ENST00000606526 91 ntBASIC2.22□□□□□ -2.05
COLCA1Q6ZS62 AC013791.1-201ENST00000616619 62 ntBASIC2.22□□□□□ -2.05
COLCA1Q6ZS62 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
COLCA1Q6ZS62 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
COLCA1Q6ZS62 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 AC062016.1-201ENST00000355719 319 ntBASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 RNU1-23P-201ENST00000363361 144 ntBASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 RNU4-10P-201ENST00000364383 140 ntBASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 SNORA20B-201ENST00000384220 132 ntBASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 RNU6-804P-201ENST00000384286 107 ntBASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 RNU6-975P-201ENST00000384296 105 ntBASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 Y_RNA.510-201ENST00000384511 114 ntBASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 Y_RNA.571-201ENST00000384753 98 ntBASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 RNA5SP210-201ENST00000391034 120 ntBASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 MIR300-201ENST00000401138 83 ntBASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 AC016925.1-201ENST00000458303 298 ntBASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 RNU6-221P-201ENST00000459541 99 ntBASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 SRIP1-201ENST00000489235 288 ntBASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 AC025754.2-201ENST00000606491 432 ntBASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 MIR6852-201ENST00000621699 66 ntBASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 AC012640.5-201ENST00000623897 319 ntBASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 MIR7157-201ENST00000635801 60 ntBASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
COLCA1Q6ZS62 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 AL157777.2-201ENST00000258070 137 ntBASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 SNORD31B-201ENST00000364977 69 ntBASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 Y_RNA.441-201ENST00000384123 112 ntBASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 Y_RNA.572-201ENST00000384757 98 ntBASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 MIR196B-201ENST00000384852 84 ntBASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 MIR27B-201ENST00000385129 97 ntBASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 RNU6-855P-201ENST00000410395 104 ntBASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 RNU2-52P-201ENST00000410680 190 ntBASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 RNA5SP184-201ENST00000411071 108 ntBASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 AC016909.1-201ENST00000415916 166 ntBASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 AL121890.1-201ENST00000435457 205 ntBASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 RPL23AP7-203ENST00000449021 469 ntBASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 EEF1B2P7-201ENST00000451177 676 ntBASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 SNORA59A-201ENST00000459326 152 ntBASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 AC007336.1-201ENST00000576365 3828 ntBASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 MIR6840-201ENST00000611937 71 ntBASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 snoZ196.1-201ENST00000625269 89 ntBASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
COLCA1Q6ZS62 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.19□□□□□ -2.06
COLCA1Q6ZS62 MIR340-201ENST00000362125 95 ntBASIC2.19□□□□□ -2.06
COLCA1Q6ZS62 RNA5SP456-201ENST00000364002 114 ntBASIC2.19□□□□□ -2.06
COLCA1Q6ZS62 snoU2_19.4-201ENST00000364329 80 ntBASIC2.19□□□□□ -2.06
COLCA1Q6ZS62 Y_RNA.412-201ENST00000384001 104 ntBASIC2.19□□□□□ -2.06
COLCA1Q6ZS62 Y_RNA.456-201ENST00000384232 111 ntBASIC2.19□□□□□ -2.06
COLCA1Q6ZS62 SNORD116-13-201ENST00000384408 92 ntBASIC2.19□□□□□ -2.06
COLCA1Q6ZS62 RNU6-220P-201ENST00000390919 107 ntBASIC2.19□□□□□ -2.06
COLCA1Q6ZS62 RNU6-381P-201ENST00000391259 108 ntBASIC2.19□□□□□ -2.06
COLCA1Q6ZS62 MTCO2P33-201ENST00000402100 465 ntBASIC2.19□□□□□ -2.06
COLCA1Q6ZS62 RNU2-2P-201ENST00000410396 191 ntBASIC2.19□□□□□ -2.06
COLCA1Q6ZS62 RPS12P2-201ENST00000439728 269 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms