Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RNA5SP20-201ENST00000515976 84 ntBASIC1.06□□□□□ -2.24
NIPAL3Q6P499 RNA5SP404-201ENST00000517118 132 ntBASIC1.06□□□□□ -2.24
NIPAL3Q6P499 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.06□□□□□ -2.24
NIPAL3Q6P499 AL022345.2-201ENST00000606307 135 ntBASIC1.06□□□□□ -2.24
NIPAL3Q6P499 AC104260.1-201ENST00000616660 539 ntBASIC1.06□□□□□ -2.24
NIPAL3Q6P499 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
NIPAL3Q6P499 RNY1P16-201ENST00000363063 111 ntBASIC1.05□□□□□ -2.24
NIPAL3Q6P499 RNU4-40P-201ENST00000364351 143 ntBASIC1.05□□□□□ -2.24
NIPAL3Q6P499 Y_RNA.267-201ENST00000364679 109 ntBASIC1.05□□□□□ -2.24
NIPAL3Q6P499 SNORA70.7-201ENST00000384159 133 ntBASIC1.05□□□□□ -2.24
NIPAL3Q6P499 Y_RNA.498-201ENST00000384460 102 ntBASIC1.05□□□□□ -2.24
NIPAL3Q6P499 RNU6-376P-201ENST00000384731 106 ntBASIC1.05□□□□□ -2.24
NIPAL3Q6P499 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
NIPAL3Q6P499 MIR548F5-201ENST00000408421 86 ntBASIC1.05□□□□□ -2.24
NIPAL3Q6P499 RNU6-1050P-201ENST00000410388 107 ntBASIC1.05□□□□□ -2.24
NIPAL3Q6P499 ELOCP21-201ENST00000412558 336 ntBASIC1.05□□□□□ -2.24
NIPAL3Q6P499 AC018865.2-201ENST00000423631 129 ntBASIC1.05□□□□□ -2.24
NIPAL3Q6P499 AC074133.1-201ENST00000515696 183 ntBASIC1.05□□□□□ -2.24
NIPAL3Q6P499 RNU7-28P-201ENST00000516759 62 ntBASIC1.05□□□□□ -2.24
NIPAL3Q6P499 AC105029.1-201ENST00000520250 669 ntBASIC1.05□□□□□ -2.24
NIPAL3Q6P499 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.05□□□□□ -2.24
NIPAL3Q6P499 GHRLOS.1-201ENST00000610995 70 ntBASIC1.05□□□□□ -2.24
NIPAL3Q6P499 AL133216.2-202ENST00000634512 349 ntBASIC1.05□□□□□ -2.24
NIPAL3Q6P499 Y_RNA.6-201ENST00000362350 114 ntBASIC1.04□□□□□ -2.24
NIPAL3Q6P499 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
NIPAL3Q6P499 RNU6-1145P-201ENST00000384246 107 ntBASIC1.04□□□□□ -2.24
NIPAL3Q6P499 Y_RNA.557-201ENST00000384680 107 ntBASIC1.04□□□□□ -2.24
NIPAL3Q6P499 MIR548K-201ENST00000408406 116 ntBASIC1.04□□□□□ -2.24
NIPAL3Q6P499 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.04□□□□□ -2.24
NIPAL3Q6P499 RAB28P5-201ENST00000427490 651 ntBASIC1.04□□□□□ -2.24
NIPAL3Q6P499 AL353997.1-201ENST00000432936 108 ntBASIC1.04□□□□□ -2.24
NIPAL3Q6P499 MTND1P34-201ENST00000438556 671 ntBASIC1.04□□□□□ -2.24
NIPAL3Q6P499 AC107399.1-201ENST00000451226 265 ntBASIC1.04□□□□□ -2.24
NIPAL3Q6P499 PCNPP5-201ENST00000452246 481 ntBASIC1.04□□□□□ -2.24
NIPAL3Q6P499 AC091021.1-201ENST00000468051 388 ntBASIC1.04□□□□□ -2.24
NIPAL3Q6P499 AC093852.1-201ENST00000503587 266 ntBASIC1.04□□□□□ -2.24
NIPAL3Q6P499 AC105758.1-201ENST00000506038 399 ntBASIC1.04□□□□□ -2.24
NIPAL3Q6P499 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.04□□□□□ -2.24
NIPAL3Q6P499 AC108729.3-201ENST00000513484 108 ntBASIC1.04□□□□□ -2.24
NIPAL3Q6P499 Y_RNA.670-201ENST00000516255 105 ntBASIC1.04□□□□□ -2.24
NIPAL3Q6P499 RNA5SP168-201ENST00000516642 112 ntBASIC1.04□□□□□ -2.24
NIPAL3Q6P499 Y_RNA.708-201ENST00000516950 96 ntBASIC1.04□□□□□ -2.24
NIPAL3Q6P499 RNU6-341P-201ENST00000516973 96 ntBASIC1.04□□□□□ -2.24
NIPAL3Q6P499 SNORA70.22-201ENST00000517160 124 ntBASIC1.04□□□□□ -2.24
NIPAL3Q6P499 AC027335.2-201ENST00000624030 375 ntBASIC1.04□□□□□ -2.24
NIPAL3Q6P499 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.03□□□□□ -2.24
NIPAL3Q6P499 SNORA27.1-201ENST00000362604 124 ntBASIC1.03□□□□□ -2.24
NIPAL3Q6P499 RNA5SP361-201ENST00000362686 118 ntBASIC1.03□□□□□ -2.24
NIPAL3Q6P499 Y_RNA.338-201ENST00000365320 114 ntBASIC1.03□□□□□ -2.24
NIPAL3Q6P499 RNU6-424P-201ENST00000384367 105 ntBASIC1.03□□□□□ -2.24
NIPAL3Q6P499 RNU6-601P-201ENST00000384540 107 ntBASIC1.03□□□□□ -2.24
NIPAL3Q6P499 MTND3P8-201ENST00000412909 339 ntBASIC1.03□□□□□ -2.24
NIPAL3Q6P499 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.03□□□□□ -2.24
NIPAL3Q6P499 CALM2P4-201ENST00000430810 426 ntBASIC1.03□□□□□ -2.24
NIPAL3Q6P499 AL603825.1-201ENST00000438481 80 ntBASIC1.03□□□□□ -2.24
NIPAL3Q6P499 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.03□□□□□ -2.24
NIPAL3Q6P499 RNU6-322P-201ENST00000516010 103 ntBASIC1.03□□□□□ -2.24
NIPAL3Q6P499 SNORA31.4-201ENST00000516049 129 ntBASIC1.03□□□□□ -2.24
NIPAL3Q6P499 RNU6-1278P-201ENST00000516130 107 ntBASIC1.03□□□□□ -2.24
NIPAL3Q6P499 AC022868.1-201ENST00000517767 391 ntBASIC1.03□□□□□ -2.24
NIPAL3Q6P499 AF235103.2-201ENST00000525753 346 ntBASIC1.03□□□□□ -2.24
NIPAL3Q6P499 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.03□□□□□ -2.24
NIPAL3Q6P499 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.03□□□□□ -2.24
NIPAL3Q6P499 AC018448.1-201ENST00000552843 316 ntBASIC1.03□□□□□ -2.24
NIPAL3Q6P499 BNIP3P10-201ENST00000605360 577 ntBASIC1.03□□□□□ -2.24
NIPAL3Q6P499 AL357075.2-201ENST00000614906 189 ntBASIC1.03□□□□□ -2.24
NIPAL3Q6P499 AC002553.4-201ENST00000616896 331 ntBASIC1.03□□□□□ -2.24
NIPAL3Q6P499 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.03□□□□□ -2.24
NIPAL3Q6P499 Y_RNA.327-201ENST00000365201 102 ntBASIC1.02□□□□□ -2.25
NIPAL3Q6P499 U8.16-201ENST00000391279 133 ntBASIC1.02□□□□□ -2.25
NIPAL3Q6P499 AL451046.2-201ENST00000403074 277 ntBASIC1.02□□□□□ -2.25
NIPAL3Q6P499 RNA5SP475-201ENST00000410568 110 ntBASIC1.02□□□□□ -2.25
NIPAL3Q6P499 RPL23AP36-201ENST00000413895 458 ntBASIC1.02□□□□□ -2.25
NIPAL3Q6P499 AC092423.1-201ENST00000430165 186 ntBASIC1.02□□□□□ -2.25
NIPAL3Q6P499 AC092473.1-201ENST00000441098 221 ntBASIC1.02□□□□□ -2.25
NIPAL3Q6P499 OR2A41P-201ENST00000473586 105 ntBASIC1.02□□□□□ -2.25
NIPAL3Q6P499 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.02□□□□□ -2.25
NIPAL3Q6P499 SNORA31.2-201ENST00000516019 134 ntBASIC1.02□□□□□ -2.25
NIPAL3Q6P499 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.02□□□□□ -2.25
NIPAL3Q6P499 AP002004.2-201ENST00000531656 154 ntBASIC1.02□□□□□ -2.25
NIPAL3Q6P499 MIR4498-201ENST00000577599 66 ntBASIC1.02□□□□□ -2.25
NIPAL3Q6P499 AC009229.3-201ENST00000608056 282 ntBASIC1.02□□□□□ -2.25
NIPAL3Q6P499 PISRT1.1-201ENST00000616930 107 ntBASIC1.02□□□□□ -2.25
NIPAL3Q6P499 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.02□□□□□ -2.25
NIPAL3Q6P499 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
NIPAL3Q6P499 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.01□□□□□ -2.25
NIPAL3Q6P499 RNU6-874P-201ENST00000362390 105 ntBASIC1.01□□□□□ -2.25
NIPAL3Q6P499 Y_RNA.358-201ENST00000365491 99 ntBASIC1.01□□□□□ -2.25
NIPAL3Q6P499 MIR653-201ENST00000385279 96 ntBASIC1.01□□□□□ -2.25
NIPAL3Q6P499 RNU6-625P-201ENST00000459412 107 ntBASIC1.01□□□□□ -2.25
NIPAL3Q6P499 OR9P1P-201ENST00000496431 281 ntBASIC1.01□□□□□ -2.25
NIPAL3Q6P499 RNU7-12P-201ENST00000516030 62 ntBASIC1.01□□□□□ -2.25
NIPAL3Q6P499 SNORD116-28-201ENST00000516123 91 ntBASIC1.01□□□□□ -2.25
NIPAL3Q6P499 RNU6-947P-201ENST00000516264 106 ntBASIC1.01□□□□□ -2.25
NIPAL3Q6P499 RN7SKP49-201ENST00000516675 260 ntBASIC1.01□□□□□ -2.25
NIPAL3Q6P499 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.01□□□□□ -2.25
NIPAL3Q6P499 AC090049.2-201ENST00000550377 109 ntBASIC1.01□□□□□ -2.25
NIPAL3Q6P499 AC005899.2-201ENST00000584353 90 ntBASIC1.01□□□□□ -2.25
NIPAL3Q6P499 AC091178.2-201ENST00000584401 117 ntBASIC1.01□□□□□ -2.25
NIPAL3Q6P499 AL359821.1-201ENST00000605519 182 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms