Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.82□□□□□ -2.28
H3F3CQ6NXT2 AC011604.1-201ENST00000545978 196 ntBASIC0.82□□□□□ -2.28
H3F3CQ6NXT2 AC093023.1-201ENST00000547375 507 ntBASIC0.82□□□□□ -2.28
H3F3CQ6NXT2 MIR5696-201ENST00000578474 85 ntBASIC0.82□□□□□ -2.28
H3F3CQ6NXT2 AL078603.1-201ENST00000603824 313 ntBASIC0.82□□□□□ -2.28
H3F3CQ6NXT2 RNU4-76P-201ENST00000364509 141 ntBASIC0.81□□□□□ -2.28
H3F3CQ6NXT2 Y_RNA.265-201ENST00000364677 108 ntBASIC0.81□□□□□ -2.28
H3F3CQ6NXT2 RNU6-407P-201ENST00000365280 104 ntBASIC0.81□□□□□ -2.28
H3F3CQ6NXT2 RNU6-136P-201ENST00000384663 107 ntBASIC0.81□□□□□ -2.28
H3F3CQ6NXT2 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.81□□□□□ -2.28
H3F3CQ6NXT2 RAB28P5-201ENST00000427490 651 ntBASIC0.81□□□□□ -2.28
H3F3CQ6NXT2 CALM2P4-201ENST00000430810 426 ntBASIC0.81□□□□□ -2.28
H3F3CQ6NXT2 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.81□□□□□ -2.28
H3F3CQ6NXT2 MTND4LP16-201ENST00000440828 295 ntBASIC0.81□□□□□ -2.28
H3F3CQ6NXT2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.81□□□□□ -2.28
H3F3CQ6NXT2 AC048334.1-201ENST00000477975 159 ntBASIC0.81□□□□□ -2.28
H3F3CQ6NXT2 AC018710.1-201ENST00000506509 158 ntBASIC0.81□□□□□ -2.28
H3F3CQ6NXT2 Y_RNA.706-201ENST00000516933 99 ntBASIC0.81□□□□□ -2.28
H3F3CQ6NXT2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.81□□□□□ -2.28
H3F3CQ6NXT2 CBX3P8-201ENST00000532412 525 ntBASIC0.81□□□□□ -2.28
H3F3CQ6NXT2 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.81□□□□□ -2.28
H3F3CQ6NXT2 MIR151B-201ENST00000584249 96 ntBASIC0.81□□□□□ -2.28
H3F3CQ6NXT2 AL020996.3-201ENST00000606617 222 ntBASIC0.81□□□□□ -2.28
H3F3CQ6NXT2 AC093913.1-201ENST00000614178 329 ntBASIC0.81□□□□□ -2.28
H3F3CQ6NXT2 AC015540.1-201ENST00000615828 501 ntBASIC0.81□□□□□ -2.28
H3F3CQ6NXT2 AC073349.3-201ENST00000617616 186 ntBASIC0.81□□□□□ -2.28
H3F3CQ6NXT2 MTND5P16-201ENST00000460269 1703 ntBASIC0.81□□□□□ -2.28
H3F3CQ6NXT2 RNU4-79P-201ENST00000362764 141 ntBASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 RNU4-24P-201ENST00000364565 139 ntBASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 Y_RNA.295-201ENST00000364918 102 ntBASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 RNU1-36P-201ENST00000365130 165 ntBASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 RNU6-842P-201ENST00000384269 107 ntBASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 RNU6-1001P-201ENST00000411265 100 ntBASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 AC063976.4-201ENST00000421971 163 ntBASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 USP9YP16-201ENST00000430287 407 ntBASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 MRPS10P1-201ENST00000448483 130 ntBASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 USP9YP23-201ENST00000455085 407 ntBASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 AC092989.1-201ENST00000481235 277 ntBASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 AC093303.1-201ENST00000514549 295 ntBASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 RNU6-864P-201ENST00000516256 108 ntBASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 Y_RNA.683-201ENST00000516508 93 ntBASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 RNA5SP168-201ENST00000516642 112 ntBASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 RNU6-1223P-201ENST00000517124 104 ntBASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 RNU7-172P-201ENST00000517125 64 ntBASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 AC068790.6-201ENST00000602558 258 ntBASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 AC022709.1-201ENST00000615967 87 ntBASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 MIR3662-201ENST00000637030 95 ntBASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 ZNF299P-201ENST00000406845 1804 ntBASIC0.8□□□□□ -2.28
H3F3CQ6NXT2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 AC005592.1-201ENST00000566527 1640 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 Y_RNA.9-201ENST00000362354 101 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 Y_RNA.89-201ENST00000363031 102 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 RNU6-595P-201ENST00000363944 107 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 Y_RNA.354-201ENST00000365448 111 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 RNU6-281P-201ENST00000384212 103 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 MIR19B1-201ENST00000384829 87 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 MIR660-201ENST00000385235 97 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 SNORD115-47-201ENST00000391226 86 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 RNU6-373P-201ENST00000411247 98 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 AC009161.1-201ENST00000417306 376 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 USMG5P1-201ENST00000425964 177 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 NDUFB4P10-201ENST00000452541 359 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 AC091021.1-201ENST00000468051 388 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 AC105758.1-201ENST00000506038 399 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 RNU4-49P-201ENST00000516080 140 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 Y_RNA.682-201ENST00000516457 100 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 RNU6-566P-201ENST00000516790 107 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 CYP3A137P-201ENST00000562436 69 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 AC004584.2-201ENST00000570407 410 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 MIR4790-201ENST00000577799 79 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 AC080078.2-201ENST00000603766 501 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 AL513534.2-201ENST00000603836 250 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 FAM71BP1-201ENST00000604431 523 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 MIR6079-201ENST00000635807 62 ntBASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
H3F3CQ6NXT2 SNORD114-24-201ENST00000365029 72 ntBASIC0.78□□□□□ -2.28
H3F3CQ6NXT2 SNORA20B-201ENST00000384220 132 ntBASIC0.78□□□□□ -2.28
H3F3CQ6NXT2 U8.16-201ENST00000391279 133 ntBASIC0.78□□□□□ -2.28
H3F3CQ6NXT2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.78□□□□□ -2.28
H3F3CQ6NXT2 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.78□□□□□ -2.28
H3F3CQ6NXT2 RNU2-64P-201ENST00000411315 191 ntBASIC0.78□□□□□ -2.28
H3F3CQ6NXT2 AL353997.1-201ENST00000432936 108 ntBASIC0.78□□□□□ -2.28
H3F3CQ6NXT2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.78□□□□□ -2.28
H3F3CQ6NXT2 Z83846.1-201ENST00000446798 265 ntBASIC0.78□□□□□ -2.28
H3F3CQ6NXT2 RPS4XP11-201ENST00000446897 772 ntBASIC0.78□□□□□ -2.28
H3F3CQ6NXT2 UQCRBP2-201ENST00000447827 297 ntBASIC0.78□□□□□ -2.28
H3F3CQ6NXT2 AC233266.1-201ENST00000454518 96 ntBASIC0.78□□□□□ -2.28
H3F3CQ6NXT2 SNORD124-201ENST00000459577 104 ntBASIC0.78□□□□□ -2.28
H3F3CQ6NXT2 PDCD5P2-201ENST00000507570 312 ntBASIC0.78□□□□□ -2.28
H3F3CQ6NXT2 AC010598.1-201ENST00000510378 103 ntBASIC0.78□□□□□ -2.28
H3F3CQ6NXT2 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.78□□□□□ -2.28
H3F3CQ6NXT2 RNU6-1291P-201ENST00000516591 104 ntBASIC0.78□□□□□ -2.28
H3F3CQ6NXT2 RNU2-56P-201ENST00000516826 190 ntBASIC0.78□□□□□ -2.28
H3F3CQ6NXT2 MIR4698-201ENST00000577795 80 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 220.1 ms