Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 EIF4BP1-201ENST00000554881 351 ntBASIC2.28□□□□□ -2.04
RNF220Q5VTB9 SUB1P4-201ENST00000566062 339 ntBASIC2.28□□□□□ -2.04
RNF220Q5VTB9 DEFB117-201ENST00000602356 141 ntBASIC2.28□□□□□ -2.04
RNF220Q5VTB9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.28□□□□□ -2.04
RNF220Q5VTB9 MIR7106-201ENST00000612419 65 ntBASIC2.28□□□□□ -2.04
RNF220Q5VTB9 MIR8062-201ENST00000621515 85 ntBASIC2.28□□□□□ -2.04
RNF220Q5VTB9 AC127459.3-201ENST00000624328 466 ntBASIC2.28□□□□□ -2.04
RNF220Q5VTB9 U6.104-201ENST00000637979 90 ntBASIC2.28□□□□□ -2.04
RNF220Q5VTB9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RNF220Q5VTB9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
RNF220Q5VTB9 AC062016.1-201ENST00000355719 319 ntBASIC2.27□□□□□ -2.05
RNF220Q5VTB9 Y_RNA.84-201ENST00000363011 104 ntBASIC2.27□□□□□ -2.05
RNF220Q5VTB9 SNORA33-201ENST00000363664 130 ntBASIC2.27□□□□□ -2.05
RNF220Q5VTB9 RNU4-52P-201ENST00000384209 138 ntBASIC2.27□□□□□ -2.05
RNF220Q5VTB9 SNORA8-201ENST00000384574 139 ntBASIC2.27□□□□□ -2.05
RNF220Q5VTB9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RNF220Q5VTB9 AL512604.1-201ENST00000404812 257 ntBASIC2.27□□□□□ -2.05
RNF220Q5VTB9 AL158823.1-201ENST00000418441 478 ntBASIC2.27□□□□□ -2.05
RNF220Q5VTB9 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.27□□□□□ -2.05
RNF220Q5VTB9 COTL1P1-201ENST00000422309 375 ntBASIC2.27□□□□□ -2.05
RNF220Q5VTB9 MTND3P2-201ENST00000438452 342 ntBASIC2.27□□□□□ -2.05
RNF220Q5VTB9 AC069257.2-201ENST00000441819 155 ntBASIC2.27□□□□□ -2.05
RNF220Q5VTB9 HSPE1P13-201ENST00000451143 297 ntBASIC2.27□□□□□ -2.05
RNF220Q5VTB9 AC010409.1-201ENST00000487382 476 ntBASIC2.27□□□□□ -2.05
RNF220Q5VTB9 RNU6-1278P-201ENST00000516130 107 ntBASIC2.27□□□□□ -2.05
RNF220Q5VTB9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.27□□□□□ -2.05
RNF220Q5VTB9 AC084364.2-201ENST00000546924 395 ntBASIC2.27□□□□□ -2.05
RNF220Q5VTB9 LARP7P3-201ENST00000579888 337 ntBASIC2.27□□□□□ -2.05
RNF220Q5VTB9 MIR4448-201ENST00000584360 86 ntBASIC2.27□□□□□ -2.05
RNF220Q5VTB9 AL162730.1-201ENST00000605734 292 ntBASIC2.27□□□□□ -2.05
RNF220Q5VTB9 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.27□□□□□ -2.05
RNF220Q5VTB9 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.27□□□□□ -2.05
RNF220Q5VTB9 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.27□□□□□ -2.05
RNF220Q5VTB9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.26□□□□□ -2.05
RNF220Q5VTB9 SNORA6-201ENST00000384033 151 ntBASIC2.26□□□□□ -2.05
RNF220Q5VTB9 Y_RNA.541-201ENST00000384640 113 ntBASIC2.26□□□□□ -2.05
RNF220Q5VTB9 MIR634-201ENST00000385208 97 ntBASIC2.26□□□□□ -2.05
RNF220Q5VTB9 SNORA53-201ENST00000391141 249 ntBASIC2.26□□□□□ -2.05
RNF220Q5VTB9 RNA5SP212-201ENST00000391223 107 ntBASIC2.26□□□□□ -2.05
RNF220Q5VTB9 MIR1302-3-201ENST00000408128 138 ntBASIC2.26□□□□□ -2.05
RNF220Q5VTB9 MIR1302-6-201ENST00000408466 90 ntBASIC2.26□□□□□ -2.05
RNF220Q5VTB9 RNA5SP338-201ENST00000410495 85 ntBASIC2.26□□□□□ -2.05
RNF220Q5VTB9 RNA5SP184-201ENST00000411071 108 ntBASIC2.26□□□□□ -2.05
RNF220Q5VTB9 MTCYBP9-201ENST00000431021 303 ntBASIC2.26□□□□□ -2.05
RNF220Q5VTB9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.26□□□□□ -2.05
RNF220Q5VTB9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.26□□□□□ -2.05
RNF220Q5VTB9 RPS29P21-201ENST00000496272 170 ntBASIC2.26□□□□□ -2.05
RNF220Q5VTB9 RNA5SP356-201ENST00000515972 94 ntBASIC2.26□□□□□ -2.05
RNF220Q5VTB9 RNA5SP320-201ENST00000516263 124 ntBASIC2.26□□□□□ -2.05
RNF220Q5VTB9 RNU6-570P-201ENST00000517051 105 ntBASIC2.26□□□□□ -2.05
RNF220Q5VTB9 RPL21P9-201ENST00000556149 474 ntBASIC2.26□□□□□ -2.05
RNF220Q5VTB9 MIR4319-201ENST00000577285 85 ntBASIC2.26□□□□□ -2.05
RNF220Q5VTB9 AC037487.3-201ENST00000606668 112 ntBASIC2.26□□□□□ -2.05
RNF220Q5VTB9 U6.108-201ENST00000637764 58 ntBASIC2.26□□□□□ -2.05
RNF220Q5VTB9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
RNF220Q5VTB9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
RNF220Q5VTB9 AC016717.2-201ENST00000609089 5141 ntBASIC2.26□□□□□ -2.05
RNF220Q5VTB9 SNORA80A-201ENST00000363922 136 ntBASIC2.25□□□□□ -2.05
RNF220Q5VTB9 Y_RNA.376-201ENST00000365638 108 ntBASIC2.25□□□□□ -2.05
RNF220Q5VTB9 MIR518C-201ENST00000384822 101 ntBASIC2.25□□□□□ -2.05
RNF220Q5VTB9 snosnR66.1-201ENST00000391095 99 ntBASIC2.25□□□□□ -2.05
RNF220Q5VTB9 RNU6-1248P-201ENST00000391096 64 ntBASIC2.25□□□□□ -2.05
RNF220Q5VTB9 RNU6-1203P-201ENST00000410703 110 ntBASIC2.25□□□□□ -2.05
RNF220Q5VTB9 AC245047.4-201ENST00000433189 144 ntBASIC2.25□□□□□ -2.05
RNF220Q5VTB9 MTND4LP30-201ENST00000454092 297 ntBASIC2.25□□□□□ -2.05
RNF220Q5VTB9 HMGN1P10-201ENST00000474557 553 ntBASIC2.25□□□□□ -2.05
RNF220Q5VTB9 TRBVB-201ENST00000477100 408 ntBASIC2.25□□□□□ -2.05
RNF220Q5VTB9 AL163195.1-201ENST00000496941 348 ntBASIC2.25□□□□□ -2.05
RNF220Q5VTB9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.25□□□□□ -2.05
RNF220Q5VTB9 MIR4287-201ENST00000579398 78 ntBASIC2.25□□□□□ -2.05
RNF220Q5VTB9 AC006386.2-201ENST00000624491 75 ntBASIC2.25□□□□□ -2.05
RNF220Q5VTB9 AC012005.1-201ENST00000624575 75 ntBASIC2.25□□□□□ -2.05
RNF220Q5VTB9 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RNF220Q5VTB9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RNF220Q5VTB9 Y_RNA.136-201ENST00000363444 102 ntBASIC2.24□□□□□ -2.05
RNF220Q5VTB9 RNU6-326P-201ENST00000365480 107 ntBASIC2.24□□□□□ -2.05
RNF220Q5VTB9 AL359511.1-201ENST00000402970 211 ntBASIC2.24□□□□□ -2.05
RNF220Q5VTB9 RNA5SP100-201ENST00000410903 110 ntBASIC2.24□□□□□ -2.05
RNF220Q5VTB9 RNA5SP59-201ENST00000410922 110 ntBASIC2.24□□□□□ -2.05
RNF220Q5VTB9 RPS26P45-201ENST00000471748 340 ntBASIC2.24□□□□□ -2.05
RNF220Q5VTB9 RNU6-1337P-201ENST00000516525 95 ntBASIC2.24□□□□□ -2.05
RNF220Q5VTB9 RNU2-31P-201ENST00000516954 155 ntBASIC2.24□□□□□ -2.05
RNF220Q5VTB9 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.24□□□□□ -2.05
RNF220Q5VTB9 RNU7-128P-201ENST00000517247 62 ntBASIC2.24□□□□□ -2.05
RNF220Q5VTB9 MIR3145-201ENST00000580727 82 ntBASIC2.24□□□□□ -2.05
RNF220Q5VTB9 AC067747.1-201ENST00000608026 250 ntBASIC2.24□□□□□ -2.05
RNF220Q5VTB9 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.24□□□□□ -2.05
RNF220Q5VTB9 AL773524.1-201ENST00000614065 229 ntBASIC2.24□□□□□ -2.05
RNF220Q5VTB9 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.24□□□□□ -2.05
RNF220Q5VTB9 SCARNA15.3-201ENST00000626315 122 ntBASIC2.24□□□□□ -2.05
RNF220Q5VTB9 SCARNA4.1-201ENST00000628597 123 ntBASIC2.24□□□□□ -2.05
RNF220Q5VTB9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
RNF220Q5VTB9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.24□□□□□ -2.05
RNF220Q5VTB9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RNF220Q5VTB9 AL356292.1-201ENST00000283110 373 ntBASIC2.23□□□□□ -2.05
RNF220Q5VTB9 RNU6-112P-201ENST00000363599 104 ntBASIC2.23□□□□□ -2.05
RNF220Q5VTB9 RNU6-117P-201ENST00000365415 107 ntBASIC2.23□□□□□ -2.05
RNF220Q5VTB9 Y_RNA.461-201ENST00000384263 103 ntBASIC2.23□□□□□ -2.05
RNF220Q5VTB9 RNU6-376P-201ENST00000384731 106 ntBASIC2.23□□□□□ -2.05
RNF220Q5VTB9 MIR520A-201ENST00000384862 85 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms