Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC107297.1-201ENST00000459991 176 ntBASIC4.17□□□□□ -1.74
RC3H1Q5TC82 RNU6-65P-201ENST00000516332 98 ntBASIC4.17□□□□□ -1.74
RC3H1Q5TC82 SNORA70.19-201ENST00000516717 90 ntBASIC4.17□□□□□ -1.74
RC3H1Q5TC82 IGHVIII-67-2-201ENST00000519849 88 ntBASIC4.17□□□□□ -1.74
RC3H1Q5TC82 IGKV3-31-201ENST00000523109 329 ntBASIC4.17□□□□□ -1.74
RC3H1Q5TC82 RPL12P50-201ENST00000603116 116 ntBASIC4.17□□□□□ -1.74
RC3H1Q5TC82 AC006023.1-201ENST00000603944 259 ntBASIC4.17□□□□□ -1.74
RC3H1Q5TC82 U7.8-201ENST00000619968 63 ntBASIC4.17□□□□□ -1.74
RC3H1Q5TC82 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RC3H1Q5TC82 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.17□□□□□ -1.74
RC3H1Q5TC82 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RC3H1Q5TC82 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RC3H1Q5TC82 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.16□□□□□ -1.74
RC3H1Q5TC82 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.16□□□□□ -1.74
RC3H1Q5TC82 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RC3H1Q5TC82 RNU6-228P-201ENST00000362700 106 ntBASIC4.16□□□□□ -1.74
RC3H1Q5TC82 SNORD32B-201ENST00000364460 84 ntBASIC4.16□□□□□ -1.74
RC3H1Q5TC82 RNU1-57P-201ENST00000384491 166 ntBASIC4.16□□□□□ -1.74
RC3H1Q5TC82 RNU6-813P-201ENST00000384691 107 ntBASIC4.16□□□□□ -1.74
RC3H1Q5TC82 RNA5SP129-201ENST00000410276 118 ntBASIC4.16□□□□□ -1.74
RC3H1Q5TC82 AL445687.1-201ENST00000439946 251 ntBASIC4.16□□□□□ -1.74
RC3H1Q5TC82 PGBD4P5-201ENST00000445958 426 ntBASIC4.16□□□□□ -1.74
RC3H1Q5TC82 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.16□□□□□ -1.74
RC3H1Q5TC82 AC008885.1-201ENST00000514930 301 ntBASIC4.16□□□□□ -1.74
RC3H1Q5TC82 RNU6-904P-201ENST00000516206 101 ntBASIC4.16□□□□□ -1.74
RC3H1Q5TC82 MIR2682-201ENST00000580305 110 ntBASIC4.16□□□□□ -1.74
RC3H1Q5TC82 AC091152.2-201ENST00000591628 2569 ntBASIC4.16□□□□□ -1.74
RC3H1Q5TC82 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RC3H1Q5TC82 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RC3H1Q5TC82 MIR302B-201ENST00000362188 73 ntBASIC4.15□□□□□ -1.75
RC3H1Q5TC82 RNA5SP225-201ENST00000410874 135 ntBASIC4.15□□□□□ -1.75
RC3H1Q5TC82 AC011406.1-201ENST00000512440 370 ntBASIC4.15□□□□□ -1.75
RC3H1Q5TC82 RNU6-1149P-201ENST00000516810 97 ntBASIC4.15□□□□□ -1.75
RC3H1Q5TC82 MIR4753-201ENST00000585119 83 ntBASIC4.15□□□□□ -1.75
RC3H1Q5TC82 AC006435.5-201ENST00000624486 112 ntBASIC4.15□□□□□ -1.75
RC3H1Q5TC82 AL137790.1-201ENST00000634283 177 ntBASIC4.15□□□□□ -1.75
RC3H1Q5TC82 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.15□□□□□ -1.75
RC3H1Q5TC82 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
RC3H1Q5TC82 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.15□□□□□ -1.75
RC3H1Q5TC82 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RC3H1Q5TC82 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RC3H1Q5TC82 RNU1-70P-201ENST00000362618 164 ntBASIC4.14□□□□□ -1.75
RC3H1Q5TC82 Y_RNA.342-201ENST00000365352 113 ntBASIC4.14□□□□□ -1.75
RC3H1Q5TC82 RNU6-1124P-201ENST00000384169 107 ntBASIC4.14□□□□□ -1.75
RC3H1Q5TC82 RNU1-89P-201ENST00000384592 164 ntBASIC4.14□□□□□ -1.75
RC3H1Q5TC82 MIR147B-201ENST00000390185 80 ntBASIC4.14□□□□□ -1.75
RC3H1Q5TC82 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RC3H1Q5TC82 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RC3H1Q5TC82 AL117342.1-201ENST00000404861 406 ntBASIC4.14□□□□□ -1.75
RC3H1Q5TC82 RNA5SP395-201ENST00000516567 118 ntBASIC4.14□□□□□ -1.75
RC3H1Q5TC82 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.14□□□□□ -1.75
RC3H1Q5TC82 XIST_intron.1-201ENST00000619444 68 ntBASIC4.14□□□□□ -1.75
RC3H1Q5TC82 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RC3H1Q5TC82 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.14□□□□□ -1.75
RC3H1Q5TC82 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.14□□□□□ -1.75
RC3H1Q5TC82 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RC3H1Q5TC82 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RC3H1Q5TC82 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.13□□□□□ -1.75
RC3H1Q5TC82 AC017071.1-201ENST00000564407 2204 ntBASIC4.13□□□□□ -1.75
RC3H1Q5TC82 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RC3H1Q5TC82 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RC3H1Q5TC82 Y_RNA.93-201ENST00000363066 109 ntBASIC4.13□□□□□ -1.75
RC3H1Q5TC82 SNORA5B-201ENST00000363786 132 ntBASIC4.13□□□□□ -1.75
RC3H1Q5TC82 RNU6-975P-201ENST00000384296 105 ntBASIC4.13□□□□□ -1.75
RC3H1Q5TC82 MIR591-201ENST00000385290 95 ntBASIC4.13□□□□□ -1.75
RC3H1Q5TC82 RNU6-57P-201ENST00000411348 103 ntBASIC4.13□□□□□ -1.75
RC3H1Q5TC82 RPS4XP11-201ENST00000446897 772 ntBASIC4.13□□□□□ -1.75
RC3H1Q5TC82 HMGN2P16-201ENST00000456802 261 ntBASIC4.13□□□□□ -1.75
RC3H1Q5TC82 AC096725.1-201ENST00000514266 313 ntBASIC4.13□□□□□ -1.75
RC3H1Q5TC82 AC141557.1-201ENST00000540982 400 ntBASIC4.13□□□□□ -1.75
RC3H1Q5TC82 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.13□□□□□ -1.75
RC3H1Q5TC82 MIR622-201ENST00000638396 96 ntBASIC4.13□□□□□ -1.75
RC3H1Q5TC82 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.13□□□□□ -1.75
RC3H1Q5TC82 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RC3H1Q5TC82 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RC3H1Q5TC82 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
RC3H1Q5TC82 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.13□□□□□ -1.75
RC3H1Q5TC82 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RC3H1Q5TC82 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.12□□□□□ -1.75
RC3H1Q5TC82 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RC3H1Q5TC82 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
RC3H1Q5TC82 AC010680.1-201ENST00000590024 3590 ntBASIC4.12□□□□□ -1.75
RC3H1Q5TC82 RNU6-414P-201ENST00000363705 104 ntBASIC4.12□□□□□ -1.75
RC3H1Q5TC82 Y_RNA.213-201ENST00000364178 111 ntBASIC4.12□□□□□ -1.75
RC3H1Q5TC82 RNU6-1231P-201ENST00000517185 103 ntBASIC4.12□□□□□ -1.75
RC3H1Q5TC82 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.12□□□□□ -1.75
RC3H1Q5TC82 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RC3H1Q5TC82 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.12□□□□□ -1.75
RC3H1Q5TC82 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RC3H1Q5TC82 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RC3H1Q5TC82 RN7SKP220-201ENST00000410611 288 ntBASIC4.11□□□□□ -1.75
RC3H1Q5TC82 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.11□□□□□ -1.75
RC3H1Q5TC82 RNU7-14P-201ENST00000459331 62 ntBASIC4.11□□□□□ -1.75
RC3H1Q5TC82 RN7SL93P-201ENST00000463035 293 ntBASIC4.11□□□□□ -1.75
RC3H1Q5TC82 SCARNA15-202ENST00000516881 127 ntBASIC4.11□□□□□ -1.75
RC3H1Q5TC82 AC011604.1-201ENST00000545978 196 ntBASIC4.11□□□□□ -1.75
RC3H1Q5TC82 AC084364.2-201ENST00000546924 395 ntBASIC4.11□□□□□ -1.75
RC3H1Q5TC82 MIR3609-201ENST00000582661 80 ntBASIC4.11□□□□□ -1.75
RC3H1Q5TC82 UBL5P2-201ENST00000583788 219 ntBASIC4.11□□□□□ -1.75
RC3H1Q5TC82 JPX_2.1-201ENST00000614161 69 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms