Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 SNORA1B-201ENST00000362535 133 ntBASIC-0.93□□□□□ -2.56
NUP188Q5SRE5 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.93□□□□□ -2.56
NUP188Q5SRE5 RNU6-125P-201ENST00000384505 107 ntBASIC-0.93□□□□□ -2.56
NUP188Q5SRE5 RNY1P7-201ENST00000384743 110 ntBASIC-0.93□□□□□ -2.56
NUP188Q5SRE5 MTCO3P8-201ENST00000453691 755 ntBASIC-0.93□□□□□ -2.56
NUP188Q5SRE5 RNU6-469P-201ENST00000516253 101 ntBASIC-0.93□□□□□ -2.56
NUP188Q5SRE5 MIR2115-201ENST00000516657 100 ntBASIC-0.93□□□□□ -2.56
NUP188Q5SRE5 MIR4436A-201ENST00000585278 85 ntBASIC-0.93□□□□□ -2.56
NUP188Q5SRE5 AP000753.3-201ENST00000604083 169 ntBASIC-0.93□□□□□ -2.56
NUP188Q5SRE5 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.93□□□□□ -2.56
NUP188Q5SRE5 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.93□□□□□ -2.56
NUP188Q5SRE5 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.93□□□□□ -2.56
NUP188Q5SRE5 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.94□□□□□ -2.56
NUP188Q5SRE5 RNU6-161P-201ENST00000363051 106 ntBASIC-0.94□□□□□ -2.56
NUP188Q5SRE5 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.94□□□□□ -2.56
NUP188Q5SRE5 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.94□□□□□ -2.56
NUP188Q5SRE5 AC133104.1-201ENST00000429100 218 ntBASIC-0.94□□□□□ -2.56
NUP188Q5SRE5 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.94□□□□□ -2.56
NUP188Q5SRE5 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.94□□□□□ -2.56
NUP188Q5SRE5 AC068587.5-201ENST00000528506 175 ntBASIC-0.94□□□□□ -2.56
NUP188Q5SRE5 LRRC34P1-201ENST00000542742 915 ntBASIC-0.94□□□□□ -2.56
NUP188Q5SRE5 SNORD92-201ENST00000585078 85 ntBASIC-0.94□□□□□ -2.56
NUP188Q5SRE5 RNU6-88P-201ENST00000606801 100 ntBASIC-0.94□□□□□ -2.56
NUP188Q5SRE5 AL078596.1-201ENST00000624856 447 ntBASIC-0.94□□□□□ -2.56
NUP188Q5SRE5 MIR4251-201ENST00000635819 61 ntBASIC-0.94□□□□□ -2.56
NUP188Q5SRE5 U8.5-201ENST00000364528 136 ntBASIC-0.95□□□□□ -2.56
NUP188Q5SRE5 RNU6-187P-201ENST00000384139 106 ntBASIC-0.95□□□□□ -2.56
NUP188Q5SRE5 RNU4-30P-201ENST00000410245 143 ntBASIC-0.95□□□□□ -2.56
NUP188Q5SRE5 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.95□□□□□ -2.56
NUP188Q5SRE5 BTBD7P2-201ENST00000441962 620 ntBASIC-0.95□□□□□ -2.56
NUP188Q5SRE5 MTND2P38-201ENST00000522536 667 ntBASIC-0.95□□□□□ -2.56
NUP188Q5SRE5 AP002004.2-201ENST00000531656 154 ntBASIC-0.95□□□□□ -2.56
NUP188Q5SRE5 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.95□□□□□ -2.56
NUP188Q5SRE5 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.95□□□□□ -2.56
NUP188Q5SRE5 AC005562.2-201ENST00000618264 111 ntBASIC-0.95□□□□□ -2.56
NUP188Q5SRE5 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.95□□□□□ -2.56
NUP188Q5SRE5 RNU6-560P-201ENST00000364007 108 ntBASIC-0.95□□□□□ -2.56
NUP188Q5SRE5 RNU6-883P-201ENST00000384597 107 ntBASIC-0.95□□□□□ -2.56
NUP188Q5SRE5 MIR516B2-201ENST00000385190 85 ntBASIC-0.95□□□□□ -2.56
NUP188Q5SRE5 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.95□□□□□ -2.56
NUP188Q5SRE5 AC079354.2-201ENST00000453523 154 ntBASIC-0.95□□□□□ -2.56
NUP188Q5SRE5 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.95□□□□□ -2.56
NUP188Q5SRE5 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.95□□□□□ -2.56
NUP188Q5SRE5 MIR3925-201ENST00000584674 77 ntBASIC-0.95□□□□□ -2.56
NUP188Q5SRE5 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.95□□□□□ -2.56
NUP188Q5SRE5 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.96□□□□□ -2.56
NUP188Q5SRE5 RNU6-336P-201ENST00000364891 107 ntBASIC-0.96□□□□□ -2.56
NUP188Q5SRE5 AC117470.1-201ENST00000381974 330 ntBASIC-0.96□□□□□ -2.56
NUP188Q5SRE5 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.96□□□□□ -2.56
NUP188Q5SRE5 RNU2-39P-201ENST00000410604 198 ntBASIC-0.96□□□□□ -2.56
NUP188Q5SRE5 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.96□□□□□ -2.56
NUP188Q5SRE5 AC243428.1-201ENST00000421099 264 ntBASIC-0.96□□□□□ -2.56
NUP188Q5SRE5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.96□□□□□ -2.56
NUP188Q5SRE5 RNU7-156P-201ENST00000517214 74 ntBASIC-0.96□□□□□ -2.56
NUP188Q5SRE5 AC022616.3-201ENST00000523940 148 ntBASIC-0.96□□□□□ -2.56
NUP188Q5SRE5 MTND4LP25-201ENST00000570218 163 ntBASIC-0.96□□□□□ -2.56
NUP188Q5SRE5 MIR548AD-201ENST00000584780 82 ntBASIC-0.96□□□□□ -2.56
NUP188Q5SRE5 OR4H6P-202ENST00000603819 340 ntBASIC-0.96□□□□□ -2.56
NUP188Q5SRE5 MIR4320-201ENST00000636981 65 ntBASIC-0.96□□□□□ -2.56
NUP188Q5SRE5 ZNF204P-201ENST00000416749 2397 ntBASIC-0.97□□□□□ -2.56
NUP188Q5SRE5 RNU6-236P-201ENST00000363886 106 ntBASIC-0.97□□□□□ -2.56
NUP188Q5SRE5 RNA5SP48-201ENST00000363969 126 ntBASIC-0.97□□□□□ -2.56
NUP188Q5SRE5 SNORA36A-201ENST00000384221 132 ntBASIC-0.97□□□□□ -2.56
NUP188Q5SRE5 MIR802-201ENST00000390235 94 ntBASIC-0.97□□□□□ -2.56
NUP188Q5SRE5 AC004866.1-201ENST00000411748 78 ntBASIC-0.97□□□□□ -2.56
NUP188Q5SRE5 AC098592.1-201ENST00000419352 333 ntBASIC-0.97□□□□□ -2.56
NUP188Q5SRE5 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.97□□□□□ -2.56
NUP188Q5SRE5 AL353572.1-201ENST00000442490 417 ntBASIC-0.97□□□□□ -2.56
NUP188Q5SRE5 AC107297.1-201ENST00000459991 176 ntBASIC-0.97□□□□□ -2.56
NUP188Q5SRE5 AC012409.4-201ENST00000612923 249 ntBASIC-0.97□□□□□ -2.56
NUP188Q5SRE5 AL442067.1-201ENST00000613261 223 ntBASIC-0.97□□□□□ -2.56
NUP188Q5SRE5 AC091304.10-201ENST00000641554 121 ntBASIC-0.97□□□□□ -2.56
NUP188Q5SRE5 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.98□□□□□ -2.57
NUP188Q5SRE5 MIR452-201ENST00000385020 85 ntBASIC-0.98□□□□□ -2.57
NUP188Q5SRE5 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.98□□□□□ -2.57
NUP188Q5SRE5 MCFD2P1-201ENST00000417812 300 ntBASIC-0.98□□□□□ -2.57
NUP188Q5SRE5 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.98□□□□□ -2.57
NUP188Q5SRE5 MTCO1P20-201ENST00000425366 358 ntBASIC-0.98□□□□□ -2.57
NUP188Q5SRE5 MIR4264-201ENST00000583520 66 ntBASIC-0.98□□□□□ -2.57
NUP188Q5SRE5 AC125232.2-201ENST00000592457 143 ntBASIC-0.98□□□□□ -2.57
NUP188Q5SRE5 AC099785.1-201ENST00000605697 437 ntBASIC-0.98□□□□□ -2.57
NUP188Q5SRE5 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.98□□□□□ -2.57
NUP188Q5SRE5 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.98□□□□□ -2.57
NUP188Q5SRE5 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.98□□□□□ -2.57
NUP188Q5SRE5 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.98□□□□□ -2.57
NUP188Q5SRE5 RNU6-10P-201ENST00000384036 107 ntBASIC-0.98□□□□□ -2.57
NUP188Q5SRE5 MIR18B-201ENST00000454574 71 ntBASIC-0.98□□□□□ -2.57
NUP188Q5SRE5 RNU7-182P-201ENST00000459009 62 ntBASIC-0.98□□□□□ -2.57
NUP188Q5SRE5 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.98□□□□□ -2.57
NUP188Q5SRE5 AC018448.1-201ENST00000552843 316 ntBASIC-0.98□□□□□ -2.57
NUP188Q5SRE5 FRG2DP-202ENST00000566967 323 ntBASIC-0.98□□□□□ -2.57
NUP188Q5SRE5 SNORA25.7-201ENST00000364375 127 ntBASIC-0.99□□□□□ -2.57
NUP188Q5SRE5 SNORD14.1-201ENST00000365609 90 ntBASIC-0.99□□□□□ -2.57
NUP188Q5SRE5 RNU2-54P-201ENST00000410299 190 ntBASIC-0.99□□□□□ -2.57
NUP188Q5SRE5 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.99□□□□□ -2.57
NUP188Q5SRE5 AC117522.1-201ENST00000509821 380 ntBASIC-0.99□□□□□ -2.57
NUP188Q5SRE5 RNU6-344P-201ENST00000516635 111 ntBASIC-0.99□□□□□ -2.57
NUP188Q5SRE5 AC107934.1-201ENST00000522215 217 ntBASIC-0.99□□□□□ -2.57
NUP188Q5SRE5 MIR4432-201ENST00000581823 84 ntBASIC-0.99□□□□□ -2.57
NUP188Q5SRE5 MIR6828-201ENST00000636181 60 ntBASIC-0.99□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms