Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.53□□□□□ -1.84
RNFT1Q5M7Z0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
RNFT1Q5M7Z0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
RNFT1Q5M7Z0 AC091152.2-201ENST00000591628 2569 ntBASIC3.53□□□□□ -1.85
RNFT1Q5M7Z0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
RNFT1Q5M7Z0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 RNU6-509P-201ENST00000363519 107 ntBASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 Y_RNA.440-201ENST00000384120 114 ntBASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 RNY1P4-201ENST00000384595 115 ntBASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 Y_RNA.565-201ENST00000384719 101 ntBASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 MIR449B-201ENST00000384995 97 ntBASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 MIR605-201ENST00000385078 83 ntBASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 RNU4-69P-201ENST00000410677 143 ntBASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 AL139247.1-201ENST00000422768 325 ntBASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 HLA-N-201ENST00000437516 135 ntBASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 RNU7-80P-201ENST00000459562 61 ntBASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 RN7SL271P-201ENST00000487601 295 ntBASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 RPS23P4-201ENST00000487908 423 ntBASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 MIR449C-201ENST00000516047 92 ntBASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 RNU1-95P-201ENST00000516357 160 ntBASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 RNU1-128P-201ENST00000516704 160 ntBASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 CYP4A43P-201ENST00000568156 121 ntBASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 SNORA51-201ENST00000606420 132 ntBASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 Y_RNA.773-201ENST00000607168 90 ntBASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
RNFT1Q5M7Z0 Y_RNA.37-201ENST00000362606 108 ntBASIC3.51□□□□□ -1.85
RNFT1Q5M7Z0 SNORD115-28-201ENST00000363931 81 ntBASIC3.51□□□□□ -1.85
RNFT1Q5M7Z0 SNORA14A-201ENST00000364773 135 ntBASIC3.51□□□□□ -1.85
RNFT1Q5M7Z0 RNU6-590P-201ENST00000365039 107 ntBASIC3.51□□□□□ -1.85
RNFT1Q5M7Z0 SNORA70.4-201ENST00000365509 134 ntBASIC3.51□□□□□ -1.85
RNFT1Q5M7Z0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNFT1Q5M7Z0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNFT1Q5M7Z0 MIR1251-201ENST00000408552 70 ntBASIC3.51□□□□□ -1.85
RNFT1Q5M7Z0 SNORA3C-201ENST00000408792 125 ntBASIC3.51□□□□□ -1.85
RNFT1Q5M7Z0 RNU2-40P-201ENST00000410833 196 ntBASIC3.51□□□□□ -1.85
RNFT1Q5M7Z0 AL353813.1-201ENST00000440700 253 ntBASIC3.51□□□□□ -1.85
RNFT1Q5M7Z0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.51□□□□□ -1.85
RNFT1Q5M7Z0 RPL36AP48-201ENST00000485521 314 ntBASIC3.51□□□□□ -1.85
RNFT1Q5M7Z0 AC006441.5-201ENST00000612680 209 ntBASIC3.51□□□□□ -1.85
RNFT1Q5M7Z0 AC064859.1-201ENST00000624741 174 ntBASIC3.51□□□□□ -1.85
RNFT1Q5M7Z0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNFT1Q5M7Z0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNFT1Q5M7Z0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RNFT1Q5M7Z0 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.5□□□□□ -1.85
RNFT1Q5M7Z0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
RNFT1Q5M7Z0 AC017071.1-201ENST00000564407 2204 ntBASIC3.5□□□□□ -1.85
RNFT1Q5M7Z0 SNORA5A-201ENST00000384111 134 ntBASIC3.5□□□□□ -1.85
RNFT1Q5M7Z0 RNU11-5P-201ENST00000391216 129 ntBASIC3.5□□□□□ -1.85
RNFT1Q5M7Z0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.5□□□□□ -1.85
RNFT1Q5M7Z0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.5□□□□□ -1.85
RNFT1Q5M7Z0 AC025554.1-201ENST00000505641 188 ntBASIC3.5□□□□□ -1.85
RNFT1Q5M7Z0 AC026403.1-201ENST00000518938 295 ntBASIC3.5□□□□□ -1.85
RNFT1Q5M7Z0 AC022695.1-201ENST00000522089 237 ntBASIC3.5□□□□□ -1.85
RNFT1Q5M7Z0 MIR4474-201ENST00000579189 78 ntBASIC3.5□□□□□ -1.85
RNFT1Q5M7Z0 MIR4439-201ENST00000583746 80 ntBASIC3.5□□□□□ -1.85
RNFT1Q5M7Z0 AC022217.4-201ENST00000604389 163 ntBASIC3.5□□□□□ -1.85
RNFT1Q5M7Z0 U4atac.1-201ENST00000618345 95 ntBASIC3.5□□□□□ -1.85
RNFT1Q5M7Z0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.5□□□□□ -1.85
RNFT1Q5M7Z0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RNFT1Q5M7Z0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.5□□□□□ -1.85
RNFT1Q5M7Z0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RNFT1Q5M7Z0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RNFT1Q5M7Z0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RNFT1Q5M7Z0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
RNFT1Q5M7Z0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
RNFT1Q5M7Z0 AF117829.1-206ENST00000621883 3802 ntBASIC3.49□□□□□ -1.85
RNFT1Q5M7Z0 RNU6-1229P-201ENST00000364295 107 ntBASIC3.49□□□□□ -1.85
RNFT1Q5M7Z0 Y_RNA.430-201ENST00000384081 110 ntBASIC3.49□□□□□ -1.85
RNFT1Q5M7Z0 Y_RNA.467-201ENST00000384297 102 ntBASIC3.49□□□□□ -1.85
RNFT1Q5M7Z0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RNFT1Q5M7Z0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RNFT1Q5M7Z0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.49□□□□□ -1.85
RNFT1Q5M7Z0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.49□□□□□ -1.85
RNFT1Q5M7Z0 RPS26P15-201ENST00000488067 348 ntBASIC3.49□□□□□ -1.85
RNFT1Q5M7Z0 AC244505.7-201ENST00000599675 272 ntBASIC3.49□□□□□ -1.85
RNFT1Q5M7Z0 AC008739.3-201ENST00000603262 127 ntBASIC3.49□□□□□ -1.85
RNFT1Q5M7Z0 AC090115.4-201ENST00000609970 188 ntBASIC3.49□□□□□ -1.85
RNFT1Q5M7Z0 uc_338.14-201ENST00000613162 166 ntBASIC3.49□□□□□ -1.85
RNFT1Q5M7Z0 U6.98-201ENST00000637157 84 ntBASIC3.49□□□□□ -1.85
RNFT1Q5M7Z0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.49□□□□□ -1.85
RNFT1Q5M7Z0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
RNFT1Q5M7Z0 AC018630.2-201ENST00000534866 2403 ntBASIC3.49□□□□□ -1.85
RNFT1Q5M7Z0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RNFT1Q5M7Z0 MAPK10-253ENST00000641010 4072 ntBASIC3.49□□□□□ -1.85
RNFT1Q5M7Z0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RNFT1Q5M7Z0 RNU6-633P-201ENST00000362612 103 ntBASIC3.48□□□□□ -1.85
RNFT1Q5M7Z0 RNA5SP119-201ENST00000362715 117 ntBASIC3.48□□□□□ -1.85
RNFT1Q5M7Z0 MIR513A2-201ENST00000385249 127 ntBASIC3.48□□□□□ -1.85
RNFT1Q5M7Z0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
RNFT1Q5M7Z0 RNU6-679P-201ENST00000391003 106 ntBASIC3.48□□□□□ -1.85
RNFT1Q5M7Z0 AL138878.1-201ENST00000405131 347 ntBASIC3.48□□□□□ -1.85
RNFT1Q5M7Z0 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.48□□□□□ -1.85
RNFT1Q5M7Z0 FTH1P12-201ENST00000432137 551 ntBASIC3.48□□□□□ -1.85
RNFT1Q5M7Z0 snoU13.28-201ENST00000459235 104 ntBASIC3.48□□□□□ -1.85
RNFT1Q5M7Z0 SNORD36C-201ENST00000516733 66 ntBASIC3.48□□□□□ -1.85
RNFT1Q5M7Z0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms