Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 AL627390.1-201ENST00000396055 340 ntBASIC1.79□□□□□ -2.12
ALFQ53S48 AC093019.1-201ENST00000443135 252 ntBASIC1.79□□□□□ -2.12
ALFQ53S48 RNU7-169P-201ENST00000459456 61 ntBASIC1.79□□□□□ -2.12
ALFQ53S48 AC099513.1-201ENST00000490423 301 ntBASIC1.79□□□□□ -2.12
ALFQ53S48 RNU6-277P-201ENST00000516272 106 ntBASIC1.79□□□□□ -2.12
ALFQ53S48 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.79□□□□□ -2.12
ALFQ53S48 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.79□□□□□ -2.12
ALFQ53S48 AL162424.1-201ENST00000602325 221 ntBASIC1.79□□□□□ -2.12
ALFQ53S48 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
ALFQ53S48 RNU6-376P-201ENST00000384731 106 ntBASIC1.78□□□□□ -2.12
ALFQ53S48 MIR562-201ENST00000384894 95 ntBASIC1.78□□□□□ -2.12
ALFQ53S48 RNY4P36-201ENST00000391116 96 ntBASIC1.78□□□□□ -2.12
ALFQ53S48 AC099799.1-201ENST00000439809 192 ntBASIC1.78□□□□□ -2.12
ALFQ53S48 ELOCP24-201ENST00000456370 334 ntBASIC1.78□□□□□ -2.12
ALFQ53S48 snoU13.23-201ENST00000458863 104 ntBASIC1.78□□□□□ -2.12
ALFQ53S48 RNU6-408P-201ENST00000515910 100 ntBASIC1.78□□□□□ -2.12
ALFQ53S48 RNU6-1278P-201ENST00000516130 107 ntBASIC1.78□□□□□ -2.12
ALFQ53S48 MIR4801-201ENST00000582704 82 ntBASIC1.78□□□□□ -2.12
ALFQ53S48 AL132765.2-201ENST00000610812 351 ntBASIC1.78□□□□□ -2.12
ALFQ53S48 AL021879.1-201ENST00000611756 288 ntBASIC1.78□□□□□ -2.12
ALFQ53S48 MIR6079-201ENST00000635807 62 ntBASIC1.78□□□□□ -2.12
ALFQ53S48 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.78□□□□□ -2.12
ALFQ53S48 RNU6-490P-201ENST00000362985 107 ntBASIC1.77□□□□□ -2.13
ALFQ53S48 SNORD48-201ENST00000364953 64 ntBASIC1.77□□□□□ -2.13
ALFQ53S48 MIR873-201ENST00000401120 77 ntBASIC1.77□□□□□ -2.13
ALFQ53S48 SNX2P2-201ENST00000424553 323 ntBASIC1.77□□□□□ -2.13
ALFQ53S48 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.77□□□□□ -2.13
ALFQ53S48 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.77□□□□□ -2.13
ALFQ53S48 PGBD4P5-201ENST00000445958 426 ntBASIC1.77□□□□□ -2.13
ALFQ53S48 FCF1P4-201ENST00000448326 183 ntBASIC1.77□□□□□ -2.13
ALFQ53S48 RNU1-98P-201ENST00000458992 160 ntBASIC1.77□□□□□ -2.13
ALFQ53S48 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.77□□□□□ -2.13
ALFQ53S48 AP002001.1-203ENST00000534002 267 ntBASIC1.77□□□□□ -2.13
ALFQ53S48 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.77□□□□□ -2.13
ALFQ53S48 AC015712.3-201ENST00000559380 164 ntBASIC1.77□□□□□ -2.13
ALFQ53S48 SNORA28-201ENST00000606769 126 ntBASIC1.77□□□□□ -2.13
ALFQ53S48 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.77□□□□□ -2.13
ALFQ53S48 AC006026.1-201ENST00000444025 1803 ntBASIC1.76□□□□□ -2.13
ALFQ53S48 RNU6-926P-201ENST00000384075 107 ntBASIC1.76□□□□□ -2.13
ALFQ53S48 RPS20P15-201ENST00000412792 311 ntBASIC1.76□□□□□ -2.13
ALFQ53S48 MTCO2P27-201ENST00000420740 428 ntBASIC1.76□□□□□ -2.13
ALFQ53S48 RPS27P16-201ENST00000425758 201 ntBASIC1.76□□□□□ -2.13
ALFQ53S48 AL135790.2-201ENST00000437701 267 ntBASIC1.76□□□□□ -2.13
ALFQ53S48 RNU6-548P-201ENST00000517083 115 ntBASIC1.76□□□□□ -2.13
ALFQ53S48 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.76□□□□□ -2.13
ALFQ53S48 DEFB122-202ENST00000569013 197 ntBASIC1.76□□□□□ -2.13
ALFQ53S48 AL390123.1-201ENST00000603216 237 ntBASIC1.76□□□□□ -2.13
ALFQ53S48 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.76□□□□□ -2.13
ALFQ53S48 Y_RNA.70-201ENST00000362886 110 ntBASIC1.75□□□□□ -2.13
ALFQ53S48 RNU6-454P-201ENST00000364292 107 ntBASIC1.75□□□□□ -2.13
ALFQ53S48 RNY3P4-201ENST00000384428 101 ntBASIC1.75□□□□□ -2.13
ALFQ53S48 MRPS18CP6-201ENST00000423587 223 ntBASIC1.75□□□□□ -2.13
ALFQ53S48 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.75□□□□□ -2.13
ALFQ53S48 STAG3L5P-204ENST00000443759 179 ntBASIC1.75□□□□□ -2.13
ALFQ53S48 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.75□□□□□ -2.13
ALFQ53S48 AC091951.2-201ENST00000500762 203 ntBASIC1.75□□□□□ -2.13
ALFQ53S48 SNORA25.15-201ENST00000516487 89 ntBASIC1.75□□□□□ -2.13
ALFQ53S48 RNU2-56P-201ENST00000516826 190 ntBASIC1.75□□□□□ -2.13
ALFQ53S48 Y_RNA.718-201ENST00000517110 102 ntBASIC1.75□□□□□ -2.13
ALFQ53S48 SUMO2P16-201ENST00000519475 264 ntBASIC1.75□□□□□ -2.13
ALFQ53S48 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
ALFQ53S48 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
ALFQ53S48 RNU6-1040P-201ENST00000383974 107 ntBASIC1.74□□□□□ -2.13
ALFQ53S48 RNU6-1009P-201ENST00000390996 107 ntBASIC1.74□□□□□ -2.13
ALFQ53S48 SNORD78.2-201ENST00000391076 69 ntBASIC1.74□□□□□ -2.13
ALFQ53S48 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.74□□□□□ -2.13
ALFQ53S48 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.74□□□□□ -2.13
ALFQ53S48 AC108210.2-201ENST00000503681 201 ntBASIC1.74□□□□□ -2.13
ALFQ53S48 AL355375.2-201ENST00000574825 175 ntBASIC1.74□□□□□ -2.13
ALFQ53S48 MIR3618-201ENST00000580330 88 ntBASIC1.74□□□□□ -2.13
ALFQ53S48 MIR3683-201ENST00000580847 82 ntBASIC1.74□□□□□ -2.13
ALFQ53S48 AL365434.2-201ENST00000607979 234 ntBASIC1.74□□□□□ -2.13
ALFQ53S48 AL078604.3-201ENST00000615580 211 ntBASIC1.74□□□□□ -2.13
ALFQ53S48 AC073349.3-201ENST00000617616 186 ntBASIC1.74□□□□□ -2.13
ALFQ53S48 U2.1-201ENST00000618978 145 ntBASIC1.74□□□□□ -2.13
ALFQ53S48 AL513423.1-201ENST00000621695 132 ntBASIC1.74□□□□□ -2.13
ALFQ53S48 MTND5P10-201ENST00000603719 1809 ntBASIC1.73□□□□□ -2.13
ALFQ53S48 RNY3P11-201ENST00000364153 102 ntBASIC1.73□□□□□ -2.13
ALFQ53S48 Y_RNA.265-201ENST00000364677 108 ntBASIC1.73□□□□□ -2.13
ALFQ53S48 Y_RNA.303-201ENST00000364998 94 ntBASIC1.73□□□□□ -2.13
ALFQ53S48 SNORD116-29-201ENST00000384516 83 ntBASIC1.73□□□□□ -2.13
ALFQ53S48 MIR559-201ENST00000385188 96 ntBASIC1.73□□□□□ -2.13
ALFQ53S48 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.73□□□□□ -2.13
ALFQ53S48 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.73□□□□□ -2.13
ALFQ53S48 AL137792.2-201ENST00000443484 235 ntBASIC1.73□□□□□ -2.13
ALFQ53S48 AC091021.1-201ENST00000468051 388 ntBASIC1.73□□□□□ -2.13
ALFQ53S48 AC023442.1-201ENST00000531247 422 ntBASIC1.73□□□□□ -2.13
ALFQ53S48 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.73□□□□□ -2.13
ALFQ53S48 MIR548S-201ENST00000581352 82 ntBASIC1.73□□□□□ -2.13
ALFQ53S48 MIR4524B-201ENST00000581569 115 ntBASIC1.73□□□□□ -2.13
ALFQ53S48 AC006380.1-201ENST00000603598 186 ntBASIC1.73□□□□□ -2.13
ALFQ53S48 AC005828.6-201ENST00000606610 232 ntBASIC1.73□□□□□ -2.13
ALFQ53S48 AC084781.2-201ENST00000615568 161 ntBASIC1.73□□□□□ -2.13
ALFQ53S48 AC127459.3-201ENST00000624328 466 ntBASIC1.73□□□□□ -2.13
ALFQ53S48 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.73□□□□□ -2.13
ALFQ53S48 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
ALFQ53S48 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
ALFQ53S48 RNU1-17P-201ENST00000363022 152 ntBASIC1.72□□□□□ -2.13
ALFQ53S48 Y_RNA.267-201ENST00000364679 109 ntBASIC1.72□□□□□ -2.13
ALFQ53S48 RNA5SP190-201ENST00000365222 118 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 196.6 ms