Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SF3B3Q15393 AC010329.5-201ENST00000623497 2174 ntBASIC2.7□□□□□ -1.98
SF3B3Q15393 RNU4-80P-201ENST00000363200 141 ntBASIC2.69□□□□□ -1.98
SF3B3Q15393 DEFA7P-201ENST00000382676 285 ntBASIC2.69□□□□□ -1.98
SF3B3Q15393 MIR524-201ENST00000385242 87 ntBASIC2.69□□□□□ -1.98
SF3B3Q15393 SNORA48.3-201ENST00000391081 134 ntBASIC2.69□□□□□ -1.98
SF3B3Q15393 RNU6-1328P-201ENST00000410938 106 ntBASIC2.69□□□□□ -1.98
SF3B3Q15393 Y_RNA.793-201ENST00000411222 111 ntBASIC2.69□□□□□ -1.98
SF3B3Q15393 AL445646.1-201ENST00000431784 216 ntBASIC2.69□□□□□ -1.98
SF3B3Q15393 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.69□□□□□ -1.98
SF3B3Q15393 SUMO1P2-201ENST00000452524 304 ntBASIC2.69□□□□□ -1.98
SF3B3Q15393 Y_RNA.638-201ENST00000459374 113 ntBASIC2.69□□□□□ -1.98
SF3B3Q15393 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.69□□□□□ -1.98
SF3B3Q15393 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.69□□□□□ -1.98
SF3B3Q15393 AL449363.1-201ENST00000617815 186 ntBASIC2.69□□□□□ -1.98
SF3B3Q15393 ZNF355P-201ENST00000427301 3216 ntBASIC2.69□□□□□ -1.98
SF3B3Q15393 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SF3B3Q15393 Y_RNA.150-201ENST00000363562 102 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 RNU1-51P-201ENST00000365345 176 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 RNU6-662P-201ENST00000384253 104 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 RNU6-886P-201ENST00000384319 105 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 PCNPP3-201ENST00000393579 471 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 RNU2-2P-201ENST00000410396 191 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 AC011753.1-201ENST00000451001 220 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 RNU7-120P-201ENST00000459334 63 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 RNU6-191P-201ENST00000516295 94 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 MIR3145-201ENST00000580727 82 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 AL512605.2-201ENST00000592972 256 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 Z83818.1-201ENST00000603584 150 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 RPL17P51-201ENST00000605218 238 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 U2.15-201ENST00000611544 191 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 U2.16-201ENST00000613119 191 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 U2.12-201ENST00000613778 191 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 U2.20-201ENST00000613956 192 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 AC245884.12-201ENST00000615364 59 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 U2.9-201ENST00000615427 191 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 U2.11-201ENST00000616345 191 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 U2.2-201ENST00000616535 191 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 U2.3-201ENST00000617785 191 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 U2.19-201ENST00000618602 191 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 RNU2-1-201ENST00000618664 191 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 U2.6-201ENST00000619225 191 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 U2.5-201ENST00000619465 191 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 U2.10-201ENST00000620268 191 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 MIR6132-201ENST00000622083 109 ntBASIC2.68□□□□□ -1.98
SF3B3Q15393 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
SF3B3Q15393 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.68□□□□□ -1.98
SF3B3Q15393 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SF3B3Q15393 ZNF271P-202ENST00000465539 1970 ntBASIC2.67□□□□□ -1.98
SF3B3Q15393 MIR6073-201ENST00000352083 89 ntBASIC2.67□□□□□ -1.98
SF3B3Q15393 RNU1-72P-201ENST00000362976 153 ntBASIC2.67□□□□□ -1.98
SF3B3Q15393 RNU6-486P-201ENST00000363116 107 ntBASIC2.67□□□□□ -1.98
SF3B3Q15393 Y_RNA.270-201ENST00000364693 104 ntBASIC2.67□□□□□ -1.98
SF3B3Q15393 MIR29B2-201ENST00000385055 81 ntBASIC2.67□□□□□ -1.98
SF3B3Q15393 RNU6-220P-201ENST00000390919 107 ntBASIC2.67□□□□□ -1.98
SF3B3Q15393 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.67□□□□□ -1.98
SF3B3Q15393 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.67□□□□□ -1.98
SF3B3Q15393 Y_RNA.679-201ENST00000516416 91 ntBASIC2.67□□□□□ -1.98
SF3B3Q15393 RNU6-107P-201ENST00000516643 102 ntBASIC2.67□□□□□ -1.98
SF3B3Q15393 RNU1-117P-201ENST00000517041 158 ntBASIC2.67□□□□□ -1.98
SF3B3Q15393 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.67□□□□□ -1.98
SF3B3Q15393 AC024405.2-202ENST00000532731 184 ntBASIC2.67□□□□□ -1.98
SF3B3Q15393 DEFB117-201ENST00000602356 141 ntBASIC2.67□□□□□ -1.98
SF3B3Q15393 AC025754.2-201ENST00000606491 432 ntBASIC2.67□□□□□ -1.98
SF3B3Q15393 AC008873.1-201ENST00000625051 138 ntBASIC2.67□□□□□ -1.98
SF3B3Q15393 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.66□□□□□ -1.98
SF3B3Q15393 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.66□□□□□ -1.98
SF3B3Q15393 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.66□□□□□ -1.98
SF3B3Q15393 NDUFB4P10-201ENST00000452541 359 ntBASIC2.66□□□□□ -1.98
SF3B3Q15393 AC108210.2-201ENST00000503681 201 ntBASIC2.66□□□□□ -1.98
SF3B3Q15393 AC107393.1-201ENST00000512403 346 ntBASIC2.66□□□□□ -1.98
SF3B3Q15393 RNU6-436P-201ENST00000516171 114 ntBASIC2.66□□□□□ -1.98
SF3B3Q15393 AP002392.1-201ENST00000537692 208 ntBASIC2.66□□□□□ -1.98
SF3B3Q15393 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.66□□□□□ -1.98
SF3B3Q15393 AC006380.1-201ENST00000603598 186 ntBASIC2.66□□□□□ -1.98
SF3B3Q15393 AL670379.2-201ENST00000604983 252 ntBASIC2.66□□□□□ -1.98
SF3B3Q15393 MIR6895-201ENST00000613497 78 ntBASIC2.66□□□□□ -1.98
SF3B3Q15393 AC073349.3-201ENST00000617616 186 ntBASIC2.66□□□□□ -1.98
SF3B3Q15393 AC131280.1-202ENST00000624067 4211 ntBASIC2.66□□□□□ -1.98
SF3B3Q15393 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SF3B3Q15393 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SF3B3Q15393 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SF3B3Q15393 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SF3B3Q15393 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.65□□□□□ -1.98
SF3B3Q15393 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
SF3B3Q15393 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
SF3B3Q15393 AL356292.1-201ENST00000283110 373 ntBASIC2.65□□□□□ -1.99
SF3B3Q15393 U3.8-201ENST00000363675 217 ntBASIC2.65□□□□□ -1.99
SF3B3Q15393 Y_RNA.329-201ENST00000365209 107 ntBASIC2.65□□□□□ -1.99
SF3B3Q15393 MIR144-201ENST00000384886 86 ntBASIC2.65□□□□□ -1.99
SF3B3Q15393 U8.13-201ENST00000390842 128 ntBASIC2.65□□□□□ -1.99
SF3B3Q15393 U3.40-201ENST00000408706 208 ntBASIC2.65□□□□□ -1.99
SF3B3Q15393 TOMM22P2-201ENST00000430735 237 ntBASIC2.65□□□□□ -1.99
SF3B3Q15393 MICF-203ENST00000432679 129 ntBASIC2.65□□□□□ -1.99
SF3B3Q15393 RNU6-991P-201ENST00000516168 107 ntBASIC2.65□□□□□ -1.99
SF3B3Q15393 AC009127.3-201ENST00000570531 403 ntBASIC2.65□□□□□ -1.99
SF3B3Q15393 AC005828.6-201ENST00000606610 232 ntBASIC2.65□□□□□ -1.99
SF3B3Q15393 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.99
SF3B3Q15393 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SF3B3Q15393 SNORD115-30-201ENST00000364117 82 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms