Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AL590705.4-201ENST00000532209 134 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 AC010999.1-201ENST00000611856 324 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.55□□□□□ -2.32
FOXF1Q12946 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.55□□□□□ -2.32
FOXF1Q12946 MIR6079-201ENST00000635807 62 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.55□□□□□ -2.32
FOXF1Q12946 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
FOXF1Q12946 AP000568.1-201ENST00000282964 442 ntBASIC0.54□□□□□ -2.32
FOXF1Q12946 Y_RNA.51-201ENST00000362725 102 ntBASIC0.54□□□□□ -2.32
FOXF1Q12946 Y_RNA.373-201ENST00000365600 103 ntBASIC0.54□□□□□ -2.32
FOXF1Q12946 RNU6-1264P-201ENST00000383891 107 ntBASIC0.54□□□□□ -2.32
FOXF1Q12946 AC006461.1-201ENST00000412637 326 ntBASIC0.54□□□□□ -2.32
FOXF1Q12946 USMG5P1-201ENST00000425964 177 ntBASIC0.54□□□□□ -2.32
FOXF1Q12946 SUMO1P2-201ENST00000452524 304 ntBASIC0.54□□□□□ -2.32
FOXF1Q12946 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.54□□□□□ -2.32
FOXF1Q12946 AC048334.1-201ENST00000477975 159 ntBASIC0.54□□□□□ -2.32
FOXF1Q12946 RPS26P48-201ENST00000491713 339 ntBASIC0.54□□□□□ -2.32
FOXF1Q12946 OR9P1P-201ENST00000496431 281 ntBASIC0.54□□□□□ -2.32
FOXF1Q12946 AC046134.1-201ENST00000514454 666 ntBASIC0.54□□□□□ -2.32
FOXF1Q12946 RNU6-922P-201ENST00000516753 99 ntBASIC0.54□□□□□ -2.32
FOXF1Q12946 RNU6-341P-201ENST00000516973 96 ntBASIC0.54□□□□□ -2.32
FOXF1Q12946 UBL5P4-201ENST00000562584 236 ntBASIC0.54□□□□□ -2.32
FOXF1Q12946 AL078603.1-201ENST00000603824 313 ntBASIC0.54□□□□□ -2.32
FOXF1Q12946 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
FOXF1Q12946 SNORD114-7-201ENST00000362520 77 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 SNORA80D-201ENST00000384488 135 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 RNU6-910P-201ENST00000390844 107 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 RNU6-780P-201ENST00000391030 104 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 RNA5SP482-201ENST00000391269 118 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 MTCYBP4-201ENST00000401524 249 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 AL451046.2-201ENST00000403074 277 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 AL445305.1-201ENST00000432577 575 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 AC002429.1-201ENST00000437672 148 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 MTATP6P13-201ENST00000438531 667 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 STAG3L5P-204ENST00000443759 179 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 AP000870.1-201ENST00000472927 406 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 AC022493.2-201ENST00000506122 481 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 SNORA70.12-201ENST00000516084 153 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 RNU6-864P-201ENST00000516256 108 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 RNA5SP168-201ENST00000516642 112 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 MTND2P38-201ENST00000522536 667 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 AP002004.2-201ENST00000531656 154 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 AL121579.1-201ENST00000555129 305 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 AC004817.2-201ENST00000561794 651 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 MIR5000-201ENST00000577717 103 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 AC091178.2-201ENST00000584401 117 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 AC100812.1-201ENST00000607622 580 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 AC106754.2-201ENST00000623006 233 ntBASIC0.53□□□□□ -2.32
FOXF1Q12946 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
FOXF1Q12946 RNU6-727P-201ENST00000363592 107 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 RNU6-281P-201ENST00000384212 103 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 MIR181A1-201ENST00000385026 110 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 MIR100-201ENST00000385259 80 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 RNA5SP118-201ENST00000410385 109 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.52□□□□□ -2.33
FOXF1Q12946 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.52□□□□□ -2.33
FOXF1Q12946 RPS27P22-201ENST00000478056 241 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 AC010469.2-201ENST00000496412 480 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 PDCD5P2-201ENST00000507570 312 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 AC074133.1-201ENST00000515696 183 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 RNU6-917P-201ENST00000516294 104 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 Y_RNA.704-201ENST00000516851 102 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 RNU6-1223P-201ENST00000517124 104 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 RNU7-172P-201ENST00000517125 64 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 AC091144.1-201ENST00000519573 138 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 AC109635.3-201ENST00000529536 185 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 AP003484.1-201ENST00000530974 250 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.52□□□□□ -2.33
FOXF1Q12946 AC024909.2-201ENST00000553035 286 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 RPL21P9-201ENST00000556149 474 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 AC090617.3-201ENST00000573670 475 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 AC005828.6-201ENST00000606610 232 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 AC022079.1-201ENST00000621546 602 ntBASIC0.52□□□□□ -2.33
FOXF1Q12946 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.52□□□□□ -2.33
FOXF1Q12946 SNORA27.1-201ENST00000362604 124 ntBASIC0.51□□□□□ -2.33
FOXF1Q12946 Y_RNA.124-201ENST00000363339 93 ntBASIC0.51□□□□□ -2.33
FOXF1Q12946 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
FOXF1Q12946 SNORA20B-201ENST00000384220 132 ntBASIC0.51□□□□□ -2.33
FOXF1Q12946 RNU5A-5P-201ENST00000411054 116 ntBASIC0.51□□□□□ -2.33
FOXF1Q12946 MTND3P23-201ENST00000431980 347 ntBASIC0.51□□□□□ -2.33
FOXF1Q12946 MTND1P17-201ENST00000448961 204 ntBASIC0.51□□□□□ -2.33
FOXF1Q12946 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.51□□□□□ -2.33
FOXF1Q12946 RPL39P39-201ENST00000455840 151 ntBASIC0.51□□□□□ -2.33
FOXF1Q12946 SNORD124-201ENST00000459577 104 ntBASIC0.51□□□□□ -2.33
FOXF1Q12946 PSMC1P5-201ENST00000512850 177 ntBASIC0.51□□□□□ -2.33
FOXF1Q12946 RNU2-56P-201ENST00000516826 190 ntBASIC0.51□□□□□ -2.33
FOXF1Q12946 AC136628.3-201ENST00000521868 290 ntBASIC0.51□□□□□ -2.33
FOXF1Q12946 AC023157.2-201ENST00000540596 141 ntBASIC0.51□□□□□ -2.33
FOXF1Q12946 MIR5701-3-201ENST00000578890 82 ntBASIC0.51□□□□□ -2.33
FOXF1Q12946 MIR5701-1-201ENST00000585138 82 ntBASIC0.51□□□□□ -2.33
FOXF1Q12946 AC080078.2-201ENST00000603766 501 ntBASIC0.51□□□□□ -2.33
FOXF1Q12946 AC004832.4-201ENST00000608952 331 ntBASIC0.51□□□□□ -2.33
FOXF1Q12946 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
FOXF1Q12946 MIR5701-2-201ENST00000615634 82 ntBASIC0.51□□□□□ -2.33
FOXF1Q12946 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 MIRLET7C-201ENST00000362160 84 ntBASIC0.5□□□□□ -2.33
FOXF1Q12946 Y_RNA.38-201ENST00000362617 102 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms