Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 U2.19-201ENST00000618602 191 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 RNU2-1-201ENST00000618664 191 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 U2.6-201ENST00000619225 191 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 U2.5-201ENST00000619465 191 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 U2.10-201ENST00000620268 191 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 snoU18.1-201ENST00000629629 71 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SSRP1Q08945 CENPCP1-201ENST00000533085 2578 ntBASIC2.92□□□□□ -1.94
SSRP1Q08945 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SSRP1Q08945 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SSRP1Q08945 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
SSRP1Q08945 RNU6-801P-201ENST00000364087 105 ntBASIC2.91□□□□□ -1.94
SSRP1Q08945 SNORD114-6-201ENST00000364393 72 ntBASIC2.91□□□□□ -1.94
SSRP1Q08945 Y_RNA.310-201ENST00000365063 113 ntBASIC2.91□□□□□ -1.94
SSRP1Q08945 RNU6-301P-201ENST00000384277 107 ntBASIC2.91□□□□□ -1.94
SSRP1Q08945 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SSRP1Q08945 AC010154.1-201ENST00000425857 269 ntBASIC2.91□□□□□ -1.94
SSRP1Q08945 AL353689.1-201ENST00000438895 199 ntBASIC2.91□□□□□ -1.94
SSRP1Q08945 RPL39P40-201ENST00000445481 146 ntBASIC2.91□□□□□ -1.94
SSRP1Q08945 COX6CP14-201ENST00000469580 174 ntBASIC2.91□□□□□ -1.94
SSRP1Q08945 RPS27P22-201ENST00000478056 241 ntBASIC2.91□□□□□ -1.94
SSRP1Q08945 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.91□□□□□ -1.94
SSRP1Q08945 AC011406.1-201ENST00000512440 370 ntBASIC2.91□□□□□ -1.94
SSRP1Q08945 MIR3126-201ENST00000577443 74 ntBASIC2.91□□□□□ -1.94
SSRP1Q08945 MIR4658-201ENST00000584344 65 ntBASIC2.91□□□□□ -1.94
SSRP1Q08945 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
SSRP1Q08945 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SSRP1Q08945 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
SSRP1Q08945 RNA5SP456-201ENST00000364002 114 ntBASIC2.9□□□□□ -1.95
SSRP1Q08945 RNA5SP126-201ENST00000365092 109 ntBASIC2.9□□□□□ -1.95
SSRP1Q08945 RNY4P28-201ENST00000365281 93 ntBASIC2.9□□□□□ -1.95
SSRP1Q08945 RNU6-211P-201ENST00000384047 107 ntBASIC2.9□□□□□ -1.95
SSRP1Q08945 RNU6-763P-201ENST00000390865 106 ntBASIC2.9□□□□□ -1.95
SSRP1Q08945 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.9□□□□□ -1.95
SSRP1Q08945 RNA5SP320-201ENST00000516263 124 ntBASIC2.9□□□□□ -1.95
SSRP1Q08945 RNU6-1337P-201ENST00000516525 95 ntBASIC2.9□□□□□ -1.95
SSRP1Q08945 Y_RNA.700-201ENST00000516806 100 ntBASIC2.9□□□□□ -1.95
SSRP1Q08945 SUMO2P18-201ENST00000518873 252 ntBASIC2.9□□□□□ -1.95
SSRP1Q08945 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.9□□□□□ -1.95
SSRP1Q08945 MIR3124-201ENST00000582636 67 ntBASIC2.9□□□□□ -1.95
SSRP1Q08945 AL008718.3-201ENST00000610217 321 ntBASIC2.9□□□□□ -1.95
SSRP1Q08945 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SSRP1Q08945 Y_RNA.83-201ENST00000363005 113 ntBASIC2.89□□□□□ -1.95
SSRP1Q08945 Y_RNA.199-201ENST00000364014 102 ntBASIC2.89□□□□□ -1.95
SSRP1Q08945 Y_RNA.287-201ENST00000364853 94 ntBASIC2.89□□□□□ -1.95
SSRP1Q08945 SNORA72.4-201ENST00000384174 132 ntBASIC2.89□□□□□ -1.95
SSRP1Q08945 HMGN2P34-201ENST00000437647 269 ntBASIC2.89□□□□□ -1.95
SSRP1Q08945 Y_RNA.637-201ENST00000459424 114 ntBASIC2.89□□□□□ -1.95
SSRP1Q08945 AC010409.1-201ENST00000487382 476 ntBASIC2.89□□□□□ -1.95
SSRP1Q08945 AL137100.2-201ENST00000555786 315 ntBASIC2.89□□□□□ -1.95
SSRP1Q08945 AC011921.3-201ENST00000605540 361 ntBASIC2.89□□□□□ -1.95
SSRP1Q08945 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.89□□□□□ -1.95
SSRP1Q08945 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSRP1Q08945 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSRP1Q08945 snoU2-30.2-201ENST00000362805 70 ntBASIC2.88□□□□□ -1.95
SSRP1Q08945 RNA5SP68-201ENST00000363885 119 ntBASIC2.88□□□□□ -1.95
SSRP1Q08945 Y_RNA.274-201ENST00000364714 101 ntBASIC2.88□□□□□ -1.95
SSRP1Q08945 MIR29C-201ENST00000385231 88 ntBASIC2.88□□□□□ -1.95
SSRP1Q08945 SNORA26.5-201ENST00000391215 123 ntBASIC2.88□□□□□ -1.95
SSRP1Q08945 Z98949.2-201ENST00000440996 144 ntBASIC2.88□□□□□ -1.95
SSRP1Q08945 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.88□□□□□ -1.95
SSRP1Q08945 RPS20P10-201ENST00000451209 253 ntBASIC2.88□□□□□ -1.95
SSRP1Q08945 RN7SL636P-201ENST00000497504 294 ntBASIC2.88□□□□□ -1.95
SSRP1Q08945 RNU6-826P-201ENST00000516827 104 ntBASIC2.88□□□□□ -1.95
SSRP1Q08945 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.88□□□□□ -1.95
SSRP1Q08945 MIR4438-201ENST00000585271 93 ntBASIC2.88□□□□□ -1.95
SSRP1Q08945 AL353149.1-201ENST00000610667 244 ntBASIC2.88□□□□□ -1.95
SSRP1Q08945 MIR6817-201ENST00000615588 66 ntBASIC2.88□□□□□ -1.95
SSRP1Q08945 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.88□□□□□ -1.95
SSRP1Q08945 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSRP1Q08945 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSRP1Q08945 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SSRP1Q08945 AL356292.1-201ENST00000283110 373 ntBASIC2.87□□□□□ -1.95
SSRP1Q08945 Y_RNA.172-201ENST00000363765 102 ntBASIC2.87□□□□□ -1.95
SSRP1Q08945 Y_RNA.297-201ENST00000364950 91 ntBASIC2.87□□□□□ -1.95
SSRP1Q08945 Y_RNA.626-201ENST00000411288 95 ntBASIC2.87□□□□□ -1.95
SSRP1Q08945 OOSP1P1-201ENST00000423265 274 ntBASIC2.87□□□□□ -1.95
SSRP1Q08945 RPS12P2-201ENST00000439728 269 ntBASIC2.87□□□□□ -1.95
SSRP1Q08945 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.87□□□□□ -1.95
SSRP1Q08945 RNA5SP148-201ENST00000516527 94 ntBASIC2.87□□□□□ -1.95
SSRP1Q08945 AP005660.1-201ENST00000522972 293 ntBASIC2.87□□□□□ -1.95
SSRP1Q08945 MIR3162-201ENST00000581818 82 ntBASIC2.87□□□□□ -1.95
SSRP1Q08945 AC022202.1-201ENST00000613515 211 ntBASIC2.87□□□□□ -1.95
SSRP1Q08945 U4.3-201ENST00000621047 82 ntBASIC2.87□□□□□ -1.95
SSRP1Q08945 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SSRP1Q08945 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SSRP1Q08945 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.87□□□□□ -1.95
SSRP1Q08945 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SSRP1Q08945 SNORD115-3-201ENST00000363100 82 ntBASIC2.86□□□□□ -1.95
SSRP1Q08945 RNA5SP493-201ENST00000364115 91 ntBASIC2.86□□□□□ -1.95
SSRP1Q08945 RNU6-1164P-201ENST00000364428 107 ntBASIC2.86□□□□□ -1.95
SSRP1Q08945 Y_RNA.785-201ENST00000384290 109 ntBASIC2.86□□□□□ -1.95
SSRP1Q08945 ATP5J2P3-201ENST00000451550 258 ntBASIC2.86□□□□□ -1.95
SSRP1Q08945 U8.19-201ENST00000459095 133 ntBASIC2.86□□□□□ -1.95
SSRP1Q08945 AC097462.1-201ENST00000514125 324 ntBASIC2.86□□□□□ -1.95
SSRP1Q08945 RNU6-1041P-201ENST00000516254 102 ntBASIC2.86□□□□□ -1.95
SSRP1Q08945 RNA5SP137-201ENST00000516833 135 ntBASIC2.86□□□□□ -1.95
SSRP1Q08945 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.86□□□□□ -1.95
SSRP1Q08945 AL031274.2-201ENST00000599419 203 ntBASIC2.86□□□□□ -1.95
SSRP1Q08945 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms