Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SCN1BQ07699 RNA5SP327-201ENST00000362494 101 ntBASIC1.34□□□□□ -2.19
SCN1BQ07699 RNU6-1301P-201ENST00000362724 104 ntBASIC1.34□□□□□ -2.19
SCN1BQ07699 Y_RNA.124-201ENST00000363339 93 ntBASIC1.34□□□□□ -2.19
SCN1BQ07699 RNU6-454P-201ENST00000364292 107 ntBASIC1.34□□□□□ -2.19
SCN1BQ07699 Y_RNA.265-201ENST00000364677 108 ntBASIC1.34□□□□□ -2.19
SCN1BQ07699 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.34□□□□□ -2.19
SCN1BQ07699 RNU6-310P-201ENST00000384655 107 ntBASIC1.34□□□□□ -2.19
SCN1BQ07699 FGF7P8-201ENST00000402994 292 ntBASIC1.34□□□□□ -2.19
SCN1BQ07699 RNA5SP475-201ENST00000410568 110 ntBASIC1.34□□□□□ -2.19
SCN1BQ07699 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.34□□□□□ -2.19
SCN1BQ07699 AL160236.1-201ENST00000556317 195 ntBASIC1.34□□□□□ -2.19
SCN1BQ07699 AC022306.2-201ENST00000617563 647 ntBASIC1.34□□□□□ -2.19
SCN1BQ07699 MIR8065-201ENST00000620577 100 ntBASIC1.34□□□□□ -2.19
SCN1BQ07699 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SCN1BQ07699 RNU6-1188P-201ENST00000363795 107 ntBASIC1.33□□□□□ -2.2
SCN1BQ07699 RNU11-5P-201ENST00000391216 129 ntBASIC1.33□□□□□ -2.2
SCN1BQ07699 MIR873-201ENST00000401120 77 ntBASIC1.33□□□□□ -2.2
SCN1BQ07699 MIR1304-201ENST00000408243 91 ntBASIC1.33□□□□□ -2.2
SCN1BQ07699 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.33□□□□□ -2.2
SCN1BQ07699 RPL39P38-201ENST00000467018 153 ntBASIC1.33□□□□□ -2.2
SCN1BQ07699 AC022493.2-201ENST00000506122 481 ntBASIC1.33□□□□□ -2.2
SCN1BQ07699 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.33□□□□□ -2.2
SCN1BQ07699 RNU6-1278P-201ENST00000516130 107 ntBASIC1.33□□□□□ -2.2
SCN1BQ07699 RNU6-922P-201ENST00000516753 99 ntBASIC1.33□□□□□ -2.2
SCN1BQ07699 RNU6-264P-201ENST00000517134 104 ntBASIC1.33□□□□□ -2.2
SCN1BQ07699 RAB11AP2-201ENST00000545905 639 ntBASIC1.33□□□□□ -2.2
SCN1BQ07699 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.33□□□□□ -2.2
SCN1BQ07699 MIR4298-201ENST00000584380 73 ntBASIC1.33□□□□□ -2.2
SCN1BQ07699 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SCN1BQ07699 AC068647.2-201ENST00000637380 353 ntBASIC1.33□□□□□ -2.2
SCN1BQ07699 SNORA1B-201ENST00000362535 133 ntBASIC1.32□□□□□ -2.2
SCN1BQ07699 RNU4-76P-201ENST00000364509 141 ntBASIC1.32□□□□□ -2.2
SCN1BQ07699 Y_RNA.577-201ENST00000384794 101 ntBASIC1.32□□□□□ -2.2
SCN1BQ07699 MIR625-201ENST00000385047 85 ntBASIC1.32□□□□□ -2.2
SCN1BQ07699 SNORA75.6-201ENST00000391318 127 ntBASIC1.32□□□□□ -2.2
SCN1BQ07699 MIR1261-201ENST00000408659 82 ntBASIC1.32□□□□□ -2.2
SCN1BQ07699 CALM2P4-201ENST00000430810 426 ntBASIC1.32□□□□□ -2.2
SCN1BQ07699 AL137792.2-201ENST00000443484 235 ntBASIC1.32□□□□□ -2.2
SCN1BQ07699 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.32□□□□□ -2.2
SCN1BQ07699 RNU6-1291P-201ENST00000516591 104 ntBASIC1.32□□□□□ -2.2
SCN1BQ07699 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.32□□□□□ -2.2
SCN1BQ07699 AC080078.3-201ENST00000605407 463 ntBASIC1.32□□□□□ -2.2
SCN1BQ07699 MIR6715A-201ENST00000615929 79 ntBASIC1.32□□□□□ -2.2
SCN1BQ07699 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
SCN1BQ07699 RNU6-890P-201ENST00000384121 107 ntBASIC1.31□□□□□ -2.2
SCN1BQ07699 SNORA69.1-201ENST00000390904 137 ntBASIC1.31□□□□□ -2.2
SCN1BQ07699 MIR1289-2-201ENST00000408360 111 ntBASIC1.31□□□□□ -2.2
SCN1BQ07699 RNU6-1156P-201ENST00000410365 100 ntBASIC1.31□□□□□ -2.2
SCN1BQ07699 MTND4P28-201ENST00000426217 387 ntBASIC1.31□□□□□ -2.2
SCN1BQ07699 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.31□□□□□ -2.2
SCN1BQ07699 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.31□□□□□ -2.2
SCN1BQ07699 AC105758.1-201ENST00000506038 399 ntBASIC1.31□□□□□ -2.2
SCN1BQ07699 RNA5SP168-201ENST00000516642 112 ntBASIC1.31□□□□□ -2.2
SCN1BQ07699 RNU6-341P-201ENST00000516973 96 ntBASIC1.31□□□□□ -2.2
SCN1BQ07699 MIR2355-201ENST00000517199 87 ntBASIC1.31□□□□□ -2.2
SCN1BQ07699 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.31□□□□□ -2.2
SCN1BQ07699 AC091178.2-201ENST00000584401 117 ntBASIC1.31□□□□□ -2.2
SCN1BQ07699 BX248123.2-201ENST00000606318 124 ntBASIC1.31□□□□□ -2.2
SCN1BQ07699 AC005828.6-201ENST00000606610 232 ntBASIC1.31□□□□□ -2.2
SCN1BQ07699 AC087588.2-201ENST00000617667 426 ntBASIC1.31□□□□□ -2.2
SCN1BQ07699 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.3□□□□□ -2.2
SCN1BQ07699 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SCN1BQ07699 RNU6-926P-201ENST00000384075 107 ntBASIC1.3□□□□□ -2.2
SCN1BQ07699 MIR562-201ENST00000384894 95 ntBASIC1.3□□□□□ -2.2
SCN1BQ07699 Y_RNA.592-201ENST00000410274 109 ntBASIC1.3□□□□□ -2.2
SCN1BQ07699 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.3□□□□□ -2.2
SCN1BQ07699 DYNLT3P2-201ENST00000442517 295 ntBASIC1.3□□□□□ -2.2
SCN1BQ07699 AC007677.1-201ENST00000445757 515 ntBASIC1.3□□□□□ -2.2
SCN1BQ07699 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.3□□□□□ -2.2
SCN1BQ07699 snoU13.15-201ENST00000459407 104 ntBASIC1.3□□□□□ -2.2
SCN1BQ07699 RN7SL429P-201ENST00000479090 223 ntBASIC1.3□□□□□ -2.2
SCN1BQ07699 RN7SL489P-201ENST00000486185 223 ntBASIC1.3□□□□□ -2.2
SCN1BQ07699 RN7SL327P-201ENST00000488659 223 ntBASIC1.3□□□□□ -2.2
SCN1BQ07699 AL133373.1-201ENST00000497098 94 ntBASIC1.3□□□□□ -2.2
SCN1BQ07699 RNU6-408P-201ENST00000515910 100 ntBASIC1.3□□□□□ -2.2
SCN1BQ07699 RNU6-165P-201ENST00000517170 99 ntBASIC1.3□□□□□ -2.2
SCN1BQ07699 AC023442.1-201ENST00000531247 422 ntBASIC1.3□□□□□ -2.2
SCN1BQ07699 AP002004.2-201ENST00000531656 154 ntBASIC1.3□□□□□ -2.2
SCN1BQ07699 SNORD53B-201ENST00000577887 78 ntBASIC1.3□□□□□ -2.2
SCN1BQ07699 MIR5690-201ENST00000583739 73 ntBASIC1.3□□□□□ -2.2
SCN1BQ07699 AC104984.5-201ENST00000586878 94 ntBASIC1.3□□□□□ -2.2
SCN1BQ07699 RN7SL853P-201ENST00000617250 223 ntBASIC1.3□□□□□ -2.2
SCN1BQ07699 AC127459.3-201ENST00000624328 466 ntBASIC1.3□□□□□ -2.2
SCN1BQ07699 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SCN1BQ07699 AC005592.1-201ENST00000566527 1640 ntBASIC1.29□□□□□ -2.2
SCN1BQ07699 SNORA25.8-201ENST00000364831 128 ntBASIC1.29□□□□□ -2.2
SCN1BQ07699 RNU6-424P-201ENST00000384367 105 ntBASIC1.29□□□□□ -2.2
SCN1BQ07699 U8.16-201ENST00000391279 133 ntBASIC1.29□□□□□ -2.2
SCN1BQ07699 CYCSP49-201ENST00000420810 319 ntBASIC1.29□□□□□ -2.2
SCN1BQ07699 RPL30P15-201ENST00000457129 321 ntBASIC1.29□□□□□ -2.2
SCN1BQ07699 snoU13.26-201ENST00000459452 105 ntBASIC1.29□□□□□ -2.2
SCN1BQ07699 OR9P1P-201ENST00000496431 281 ntBASIC1.29□□□□□ -2.2
SCN1BQ07699 RNU6-559P-201ENST00000516151 98 ntBASIC1.29□□□□□ -2.2
SCN1BQ07699 RNA5SP61-201ENST00000516453 100 ntBASIC1.29□□□□□ -2.2
SCN1BQ07699 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.29□□□□□ -2.2
SCN1BQ07699 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.29□□□□□ -2.2
SCN1BQ07699 RNU6-199P-201ENST00000362954 107 ntBASIC1.28□□□□□ -2.2
SCN1BQ07699 RNA5SP190-201ENST00000365222 118 ntBASIC1.28□□□□□ -2.2
SCN1BQ07699 RNU6-117P-201ENST00000365415 107 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms