Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 RNU6-101P-201ENST00000410323 104 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 RNU6-130P-201ENST00000411112 103 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 UQCRBP2-201ENST00000447827 297 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 HSPE1P24-201ENST00000450782 238 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 U8.20-201ENST00000459445 131 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 UBL5P3-201ENST00000475112 231 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 RN7SKP179-201ENST00000516126 217 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 RNU6-764P-201ENST00000516396 105 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 RNU2-34P-201ENST00000516534 121 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 SNORA44.1-201ENST00000517031 108 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 AP002001.1-203ENST00000534002 267 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.39□□□□□ -2.19
CKAP4Q07065 MIR4423-201ENST00000580922 80 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 MIR4753-201ENST00000585119 83 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 AL355297.3-201ENST00000604082 446 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 AC124312.5-201ENST00000604451 268 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 PART1_1.1-201ENST00000611761 217 ntBASIC1.39□□□□□ -2.19
CKAP4Q07065 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.39□□□□□ -2.19
CKAP4Q07065 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CKAP4Q07065 LINC02555-201ENST00000563933 1951 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 Y_RNA.145-201ENST00000363527 102 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 Y_RNA.153-201ENST00000363615 91 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 SNORD114-6-201ENST00000364393 72 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 RNU6-450P-201ENST00000364654 107 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 Y_RNA.276-201ENST00000364732 109 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 RNU6-60P-201ENST00000364792 103 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 RNU6-1235P-201ENST00000384559 107 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CKAP4Q07065 MIR1185-2-201ENST00000408687 86 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 AC113618.1-201ENST00000416747 285 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 RAB28P5-201ENST00000427490 651 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 TOMM22P2-201ENST00000430735 237 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 HMGN2P3-201ENST00000433603 273 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 HMGN2P5-201ENST00000436882 273 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 AC073910.1-201ENST00000445047 438 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 HMGN2P23-201ENST00000456759 269 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 RNU1-131P-201ENST00000458943 161 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 RNU6-498P-201ENST00000459468 107 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 RNU7-57P-201ENST00000459540 60 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 RNU6-221P-201ENST00000459541 99 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 AC114982.1-201ENST00000469402 321 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 RNU6-408P-201ENST00000515910 100 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 RNU6-948P-201ENST00000516374 107 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 RNU6-856P-201ENST00000516959 98 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 AC091544.4-201ENST00000555268 342 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 AC025754.2-201ENST00000606491 432 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 AC116312.1-201ENST00000606841 314 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.38□□□□□ -2.19
CKAP4Q07065 AC011476.5-201ENST00000615594 130 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 MIR6852-201ENST00000621699 66 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.38□□□□□ -2.19
CKAP4Q07065 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
CKAP4Q07065 MIR424-201ENST00000362227 98 ntBASIC1.37□□□□□ -2.19
CKAP4Q07065 SNORD115-3-201ENST00000363100 82 ntBASIC1.37□□□□□ -2.19
CKAP4Q07065 RNU6-418P-201ENST00000384035 107 ntBASIC1.37□□□□□ -2.19
CKAP4Q07065 RNU6-926P-201ENST00000384075 107 ntBASIC1.37□□□□□ -2.19
CKAP4Q07065 Y_RNA.462-201ENST00000384268 102 ntBASIC1.37□□□□□ -2.19
CKAP4Q07065 Y_RNA.471-201ENST00000384312 102 ntBASIC1.37□□□□□ -2.19
CKAP4Q07065 MIR30A-201ENST00000385092 71 ntBASIC1.37□□□□□ -2.19
CKAP4Q07065 AC139712.2-201ENST00000424302 339 ntBASIC1.37□□□□□ -2.19
CKAP4Q07065 AC074290.1-201ENST00000448883 135 ntBASIC1.37□□□□□ -2.19
CKAP4Q07065 AC245102.2-201ENST00000448956 180 ntBASIC1.37□□□□□ -2.19
CKAP4Q07065 RNU6-625P-201ENST00000459412 107 ntBASIC1.37□□□□□ -2.19
CKAP4Q07065 Y_RNA.713-201ENST00000517013 96 ntBASIC1.37□□□□□ -2.19
CKAP4Q07065 Y_RNA.720-201ENST00000517166 92 ntBASIC1.37□□□□□ -2.19
CKAP4Q07065 AL360085.1-201ENST00000604713 532 ntBASIC1.37□□□□□ -2.19
CKAP4Q07065 RAC1P9-201ENST00000604990 392 ntBASIC1.37□□□□□ -2.19
CKAP4Q07065 Y_RNA.772-201ENST00000606692 102 ntBASIC1.37□□□□□ -2.19
CKAP4Q07065 U1.36-201ENST00000620684 176 ntBASIC1.37□□□□□ -2.19
CKAP4Q07065 snoZ196.1-201ENST00000625269 89 ntBASIC1.37□□□□□ -2.19
CKAP4Q07065 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.37□□□□□ -2.19
CKAP4Q07065 Y_RNA.162-201ENST00000363683 102 ntBASIC1.36□□□□□ -2.19
CKAP4Q07065 Y_RNA.183-201ENST00000363882 113 ntBASIC1.36□□□□□ -2.19
CKAP4Q07065 Y_RNA.230-201ENST00000364348 109 ntBASIC1.36□□□□□ -2.19
CKAP4Q07065 Y_RNA.439-201ENST00000384119 94 ntBASIC1.36□□□□□ -2.19
CKAP4Q07065 Y_RNA.498-201ENST00000384460 102 ntBASIC1.36□□□□□ -2.19
CKAP4Q07065 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CKAP4Q07065 MIR548F4-201ENST00000408515 105 ntBASIC1.36□□□□□ -2.19
CKAP4Q07065 AC016717.1-201ENST00000448918 286 ntBASIC1.36□□□□□ -2.19
CKAP4Q07065 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.36□□□□□ -2.19
CKAP4Q07065 UBE2DNL-203ENST00000474922 222 ntBASIC1.36□□□□□ -2.19
CKAP4Q07065 AC010655.3-201ENST00000478818 450 ntBASIC1.36□□□□□ -2.19
CKAP4Q07065 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.36□□□□□ -2.19
CKAP4Q07065 AC131281.1-201ENST00000522984 164 ntBASIC1.36□□□□□ -2.19
CKAP4Q07065 AC090821.2-201ENST00000523552 176 ntBASIC1.36□□□□□ -2.19
CKAP4Q07065 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.36□□□□□ -2.19
CKAP4Q07065 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.36□□□□□ -2.19
CKAP4Q07065 AC055872.1-201ENST00000570978 278 ntBASIC1.36□□□□□ -2.19
CKAP4Q07065 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.36□□□□□ -2.19
CKAP4Q07065 MIR3674-201ENST00000636576 68 ntBASIC1.36□□□□□ -2.19
CKAP4Q07065 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CKAP4Q07065 RNU6-626P-201ENST00000363354 107 ntBASIC1.35□□□□□ -2.19
CKAP4Q07065 Y_RNA.214-201ENST00000364201 112 ntBASIC1.35□□□□□ -2.19
CKAP4Q07065 RNU6-454P-201ENST00000364292 107 ntBASIC1.35□□□□□ -2.19
CKAP4Q07065 RNU6-20P-201ENST00000384106 107 ntBASIC1.35□□□□□ -2.19
CKAP4Q07065 RNU6-1310P-201ENST00000384153 107 ntBASIC1.35□□□□□ -2.19
CKAP4Q07065 SNORD63-201ENST00000384262 68 ntBASIC1.35□□□□□ -2.19
CKAP4Q07065 RNU6-160P-201ENST00000384591 107 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms