Protein–RNA interactions for Protein: Q01954

BNC1, Zinc finger protein basonuclin-1, humanhuman

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BNC1Q01954 HMGB3P17-201ENST00000504195 649 ntBASIC2.15□□□□□ -2.07
BNC1Q01954 SERF1AP1-201ENST00000514575 187 ntBASIC2.15□□□□□ -2.07
BNC1Q01954 MIR449C-201ENST00000516047 92 ntBASIC2.15□□□□□ -2.07
BNC1Q01954 RNU2-31P-201ENST00000516954 155 ntBASIC2.15□□□□□ -2.07
BNC1Q01954 RNU6-794P-201ENST00000517261 64 ntBASIC2.15□□□□□ -2.07
BNC1Q01954 AC055872.1-201ENST00000570978 278 ntBASIC2.15□□□□□ -2.07
BNC1Q01954 AC012433.1-201ENST00000588916 398 ntBASIC2.15□□□□□ -2.07
BNC1Q01954 AL109918.3-201ENST00000603072 338 ntBASIC2.15□□□□□ -2.07
BNC1Q01954 U2.15-201ENST00000611544 191 ntBASIC2.15□□□□□ -2.07
BNC1Q01954 U2.16-201ENST00000613119 191 ntBASIC2.15□□□□□ -2.07
BNC1Q01954 U2.12-201ENST00000613778 191 ntBASIC2.15□□□□□ -2.07
BNC1Q01954 U2.20-201ENST00000613956 192 ntBASIC2.15□□□□□ -2.07
BNC1Q01954 U2.9-201ENST00000615427 191 ntBASIC2.15□□□□□ -2.07
BNC1Q01954 U2.11-201ENST00000616345 191 ntBASIC2.15□□□□□ -2.07
BNC1Q01954 U2.2-201ENST00000616535 191 ntBASIC2.15□□□□□ -2.07
BNC1Q01954 U2.3-201ENST00000617785 191 ntBASIC2.15□□□□□ -2.07
BNC1Q01954 U2.19-201ENST00000618602 191 ntBASIC2.15□□□□□ -2.07
BNC1Q01954 RNU2-1-201ENST00000618664 191 ntBASIC2.15□□□□□ -2.07
BNC1Q01954 U2.6-201ENST00000619225 191 ntBASIC2.15□□□□□ -2.07
BNC1Q01954 U2.5-201ENST00000619465 191 ntBASIC2.15□□□□□ -2.07
BNC1Q01954 U2.10-201ENST00000620268 191 ntBASIC2.15□□□□□ -2.07
BNC1Q01954 AC091932.3-201ENST00000624223 323 ntBASIC2.15□□□□□ -2.07
BNC1Q01954 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
BNC1Q01954 Y_RNA.16-201ENST00000362421 102 ntBASIC2.14□□□□□ -2.07
BNC1Q01954 Y_RNA.352-201ENST00000365439 102 ntBASIC2.14□□□□□ -2.07
BNC1Q01954 Y_RNA.416-201ENST00000384014 113 ntBASIC2.14□□□□□ -2.07
BNC1Q01954 SNORA6-201ENST00000384033 151 ntBASIC2.14□□□□□ -2.07
BNC1Q01954 Y_RNA.446-201ENST00000384178 104 ntBASIC2.14□□□□□ -2.07
BNC1Q01954 Y_RNA.569-201ENST00000384749 103 ntBASIC2.14□□□□□ -2.07
BNC1Q01954 MIR561-201ENST00000385216 97 ntBASIC2.14□□□□□ -2.07
BNC1Q01954 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
BNC1Q01954 AL355497.1-201ENST00000406262 551 ntBASIC2.14□□□□□ -2.07
BNC1Q01954 AL357139.1-201ENST00000407792 426 ntBASIC2.14□□□□□ -2.07
BNC1Q01954 RNU2-40P-201ENST00000410833 196 ntBASIC2.14□□□□□ -2.07
BNC1Q01954 RNU2-32P-201ENST00000411193 191 ntBASIC2.14□□□□□ -2.07
BNC1Q01954 AC108059.2-201ENST00000434626 151 ntBASIC2.14□□□□□ -2.07
BNC1Q01954 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.14□□□□□ -2.07
BNC1Q01954 HMGN2P9-201ENST00000476875 229 ntBASIC2.14□□□□□ -2.07
BNC1Q01954 AC104435.1-201ENST00000483483 166 ntBASIC2.14□□□□□ -2.07
BNC1Q01954 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.14□□□□□ -2.07
BNC1Q01954 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.14□□□□□ -2.07
BNC1Q01954 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.14□□□□□ -2.07
BNC1Q01954 SCARNA16.3-201ENST00000516595 184 ntBASIC2.14□□□□□ -2.07
BNC1Q01954 RNU7-193P-201ENST00000516723 65 ntBASIC2.14□□□□□ -2.07
BNC1Q01954 AP002001.1-203ENST00000534002 267 ntBASIC2.14□□□□□ -2.07
BNC1Q01954 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.14□□□□□ -2.07
BNC1Q01954 MIR4753-201ENST00000585119 83 ntBASIC2.14□□□□□ -2.07
BNC1Q01954 AC008749.1-201ENST00000597650 306 ntBASIC2.14□□□□□ -2.07
BNC1Q01954 AL355297.2-201ENST00000604792 129 ntBASIC2.14□□□□□ -2.07
BNC1Q01954 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.14□□□□□ -2.07
BNC1Q01954 AC009487.4-201ENST00000624969 3585 ntBASIC2.14□□□□□ -2.07
BNC1Q01954 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
BNC1Q01954 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.13□□□□□ -2.07
BNC1Q01954 Y_RNA.101-201ENST00000363154 102 ntBASIC2.13□□□□□ -2.07
BNC1Q01954 Y_RNA.136-201ENST00000363444 102 ntBASIC2.13□□□□□ -2.07
BNC1Q01954 SNORA20.1-201ENST00000364790 130 ntBASIC2.13□□□□□ -2.07
BNC1Q01954 MIR548B-201ENST00000385247 97 ntBASIC2.13□□□□□ -2.07
BNC1Q01954 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
BNC1Q01954 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
BNC1Q01954 CYCSP49-201ENST00000420810 319 ntBASIC2.13□□□□□ -2.07
BNC1Q01954 RPL23AP42-201ENST00000471152 471 ntBASIC2.13□□□□□ -2.07
BNC1Q01954 RNA5SP200-201ENST00000516360 103 ntBASIC2.13□□□□□ -2.07
BNC1Q01954 RNU2-12P-201ENST00000517216 168 ntBASIC2.13□□□□□ -2.07
BNC1Q01954 MIR3684-201ENST00000579779 74 ntBASIC2.13□□□□□ -2.07
BNC1Q01954 MIR3128-201ENST00000581957 66 ntBASIC2.13□□□□□ -2.07
BNC1Q01954 AC006380.1-201ENST00000603598 186 ntBASIC2.13□□□□□ -2.07
BNC1Q01954 U4atac.1-201ENST00000618345 95 ntBASIC2.13□□□□□ -2.07
BNC1Q01954 Y_RNA.20-201ENST00000362479 113 ntBASIC2.12□□□□□ -2.07
BNC1Q01954 RNU6-545P-201ENST00000362681 104 ntBASIC2.12□□□□□ -2.07
BNC1Q01954 RNU1-23P-201ENST00000363361 144 ntBASIC2.12□□□□□ -2.07
BNC1Q01954 Y_RNA.383-201ENST00000383855 97 ntBASIC2.12□□□□□ -2.07
BNC1Q01954 RNU1-148P-201ENST00000384472 162 ntBASIC2.12□□□□□ -2.07
BNC1Q01954 Y_RNA.552-201ENST00000384665 112 ntBASIC2.12□□□□□ -2.07
BNC1Q01954 RNU6-1199P-201ENST00000411249 104 ntBASIC2.12□□□□□ -2.07
BNC1Q01954 HMGN2P38-201ENST00000423806 265 ntBASIC2.12□□□□□ -2.07
BNC1Q01954 AL445646.1-201ENST00000431784 216 ntBASIC2.12□□□□□ -2.07
BNC1Q01954 POLR2KP2-201ENST00000438155 177 ntBASIC2.12□□□□□ -2.07
BNC1Q01954 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.12□□□□□ -2.07
BNC1Q01954 AC016925.1-201ENST00000458303 298 ntBASIC2.12□□□□□ -2.07
BNC1Q01954 ATP5EP1-201ENST00000510257 156 ntBASIC2.12□□□□□ -2.07
BNC1Q01954 MTND1P19-201ENST00000511780 315 ntBASIC2.12□□□□□ -2.07
BNC1Q01954 RNU6-155P-201ENST00000516347 100 ntBASIC2.12□□□□□ -2.07
BNC1Q01954 Y_RNA.680-201ENST00000516441 93 ntBASIC2.12□□□□□ -2.07
BNC1Q01954 RNU6-965P-201ENST00000516721 96 ntBASIC2.12□□□□□ -2.07
BNC1Q01954 SCARNA24.2-201ENST00000516968 130 ntBASIC2.12□□□□□ -2.07
BNC1Q01954 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.12□□□□□ -2.07
BNC1Q01954 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.12□□□□□ -2.07
BNC1Q01954 AC009831.4-201ENST00000620744 325 ntBASIC2.12□□□□□ -2.07
BNC1Q01954 MIR1248-201ENST00000629190 106 ntBASIC2.12□□□□□ -2.07
BNC1Q01954 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
BNC1Q01954 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
BNC1Q01954 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.11□□□□□ -2.07
BNC1Q01954 RNU6-454P-201ENST00000364292 107 ntBASIC2.11□□□□□ -2.07
BNC1Q01954 RNU6-1318P-201ENST00000365389 103 ntBASIC2.11□□□□□ -2.07
BNC1Q01954 RNU6-438P-201ENST00000365561 103 ntBASIC2.11□□□□□ -2.07
BNC1Q01954 MIR1185-2-201ENST00000408687 86 ntBASIC2.11□□□□□ -2.07
BNC1Q01954 U3.40-201ENST00000408706 208 ntBASIC2.11□□□□□ -2.07
BNC1Q01954 HMGN2P18-201ENST00000450680 270 ntBASIC2.11□□□□□ -2.07
BNC1Q01954 SUMO1P2-201ENST00000452524 304 ntBASIC2.11□□□□□ -2.07
BNC1Q01954 RNA5SP458-201ENST00000516188 119 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms