Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 RPS4XP11-201ENST00000446897 772 ntBASIC0.91□□□□□ -2.26
CBX1P83916 MTND1P17-201ENST00000448961 204 ntBASIC0.91□□□□□ -2.26
CBX1P83916 AC093850.1-201ENST00000454121 251 ntBASIC0.91□□□□□ -2.26
CBX1P83916 RPL39P39-201ENST00000455840 151 ntBASIC0.91□□□□□ -2.26
CBX1P83916 AC022493.2-201ENST00000506122 481 ntBASIC0.91□□□□□ -2.26
CBX1P83916 RNA5SP20-201ENST00000515976 84 ntBASIC0.91□□□□□ -2.26
CBX1P83916 RNU7-12P-201ENST00000516030 62 ntBASIC0.91□□□□□ -2.26
CBX1P83916 AP002004.2-201ENST00000531656 154 ntBASIC0.91□□□□□ -2.26
CBX1P83916 AL121579.1-201ENST00000555129 305 ntBASIC0.91□□□□□ -2.26
CBX1P83916 AC106800.4-201ENST00000614905 153 ntBASIC0.91□□□□□ -2.26
CBX1P83916 AC015540.1-201ENST00000615828 501 ntBASIC0.91□□□□□ -2.26
CBX1P83916 MIR3662-201ENST00000637030 95 ntBASIC0.91□□□□□ -2.26
CBX1P83916 Y_RNA.48-201ENST00000362710 103 ntBASIC0.9□□□□□ -2.27
CBX1P83916 Y_RNA.157-201ENST00000363638 102 ntBASIC0.9□□□□□ -2.27
CBX1P83916 SNORD114-2-201ENST00000363953 78 ntBASIC0.9□□□□□ -2.27
CBX1P83916 RNU6-842P-201ENST00000384269 107 ntBASIC0.9□□□□□ -2.27
CBX1P83916 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.9□□□□□ -2.27
CBX1P83916 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.9□□□□□ -2.27
CBX1P83916 RNA5SP118-201ENST00000410385 109 ntBASIC0.9□□□□□ -2.27
CBX1P83916 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.9□□□□□ -2.27
CBX1P83916 DLGAP5P1-201ENST00000430307 464 ntBASIC0.9□□□□□ -2.27
CBX1P83916 SNORD5.1-201ENST00000458800 75 ntBASIC0.9□□□□□ -2.27
CBX1P83916 COX6CP14-201ENST00000469580 174 ntBASIC0.9□□□□□ -2.27
CBX1P83916 RNU6-237P-201ENST00000515985 71 ntBASIC0.9□□□□□ -2.27
CBX1P83916 SNORD79.1-201ENST00000516069 84 ntBASIC0.9□□□□□ -2.27
CBX1P83916 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.9□□□□□ -2.27
CBX1P83916 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.9□□□□□ -2.27
CBX1P83916 CBX3P8-201ENST00000532412 525 ntBASIC0.9□□□□□ -2.27
CBX1P83916 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.9□□□□□ -2.27
CBX1P83916 AC091178.2-201ENST00000584401 117 ntBASIC0.9□□□□□ -2.27
CBX1P83916 AC125232.2-201ENST00000592457 143 ntBASIC0.9□□□□□ -2.27
CBX1P83916 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CBX1P83916 AL020996.3-201ENST00000606617 222 ntBASIC0.9□□□□□ -2.27
CBX1P83916 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.9□□□□□ -2.27
CBX1P83916 AC073544.1-201ENST00000600110 1595 ntBASIC0.9□□□□□ -2.27
CBX1P83916 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.9□□□□□ -2.27
CBX1P83916 SNORA1B-201ENST00000362535 133 ntBASIC0.89□□□□□ -2.27
CBX1P83916 SNORA27.1-201ENST00000362604 124 ntBASIC0.89□□□□□ -2.27
CBX1P83916 Y_RNA.89-201ENST00000363031 102 ntBASIC0.89□□□□□ -2.27
CBX1P83916 MIR329-1-201ENST00000385028 80 ntBASIC0.89□□□□□ -2.27
CBX1P83916 RNA5SP482-201ENST00000391269 118 ntBASIC0.89□□□□□ -2.27
CBX1P83916 RNU6-1148P-201ENST00000410992 104 ntBASIC0.89□□□□□ -2.27
CBX1P83916 POLR2J4-204ENST00000418424 324 ntBASIC0.89□□□□□ -2.27
CBX1P83916 AL139396.1-201ENST00000421137 167 ntBASIC0.89□□□□□ -2.27
CBX1P83916 AC002429.1-201ENST00000437672 148 ntBASIC0.89□□□□□ -2.27
CBX1P83916 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.89□□□□□ -2.27
CBX1P83916 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.89□□□□□ -2.27
CBX1P83916 RNU6-1053P-201ENST00000515930 101 ntBASIC0.89□□□□□ -2.27
CBX1P83916 RNU6-1278P-201ENST00000516130 107 ntBASIC0.89□□□□□ -2.27
CBX1P83916 SCARNA16.2-201ENST00000516520 172 ntBASIC0.89□□□□□ -2.27
CBX1P83916 AC016727.1-205ENST00000605437 569 ntBASIC0.89□□□□□ -2.27
CBX1P83916 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CBX1P83916 AC005592.1-201ENST00000566527 1640 ntBASIC0.89□□□□□ -2.27
CBX1P83916 SNORD114-24-201ENST00000365029 72 ntBASIC0.88□□□□□ -2.27
CBX1P83916 Y_RNA.363-201ENST00000365529 113 ntBASIC0.88□□□□□ -2.27
CBX1P83916 SNORA80D-201ENST00000384488 135 ntBASIC0.88□□□□□ -2.27
CBX1P83916 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
CBX1P83916 MIR190B-201ENST00000401119 79 ntBASIC0.88□□□□□ -2.27
CBX1P83916 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.88□□□□□ -2.27
CBX1P83916 ELOCP21-201ENST00000412558 336 ntBASIC0.88□□□□□ -2.27
CBX1P83916 EIF1P2-201ENST00000428233 350 ntBASIC0.88□□□□□ -2.27
CBX1P83916 SNORD124-201ENST00000459577 104 ntBASIC0.88□□□□□ -2.27
CBX1P83916 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.88□□□□□ -2.27
CBX1P83916 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.88□□□□□ -2.27
CBX1P83916 MIR4790-201ENST00000577799 79 ntBASIC0.88□□□□□ -2.27
CBX1P83916 MIR4653-201ENST00000585107 83 ntBASIC0.88□□□□□ -2.27
CBX1P83916 AC093913.1-201ENST00000614178 329 ntBASIC0.88□□□□□ -2.27
CBX1P83916 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.87□□□□□ -2.27
CBX1P83916 Y_RNA.124-201ENST00000363339 93 ntBASIC0.87□□□□□ -2.27
CBX1P83916 Y_RNA.450-201ENST00000384198 113 ntBASIC0.87□□□□□ -2.27
CBX1P83916 Y_RNA.554-201ENST00000384672 102 ntBASIC0.87□□□□□ -2.27
CBX1P83916 Y_RNA.573-201ENST00000384763 105 ntBASIC0.87□□□□□ -2.27
CBX1P83916 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.87□□□□□ -2.27
CBX1P83916 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.87□□□□□ -2.27
CBX1P83916 AC104332.1-201ENST00000440471 797 ntBASIC0.87□□□□□ -2.27
CBX1P83916 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.87□□□□□ -2.27
CBX1P83916 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
CBX1P83916 RNU6-1291P-201ENST00000516591 104 ntBASIC0.87□□□□□ -2.27
CBX1P83916 MIR5701-3-201ENST00000578890 82 ntBASIC0.87□□□□□ -2.27
CBX1P83916 MIR5701-1-201ENST00000585138 82 ntBASIC0.87□□□□□ -2.27
CBX1P83916 AL117336.2-201ENST00000602435 335 ntBASIC0.87□□□□□ -2.27
CBX1P83916 BNIP3P10-201ENST00000605360 577 ntBASIC0.87□□□□□ -2.27
CBX1P83916 AL359821.1-201ENST00000605519 182 ntBASIC0.87□□□□□ -2.27
CBX1P83916 AC012557.2-201ENST00000605919 418 ntBASIC0.87□□□□□ -2.27
CBX1P83916 MIR5701-2-201ENST00000615634 82 ntBASIC0.87□□□□□ -2.27
CBX1P83916 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.87□□□□□ -2.27
CBX1P83916 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.87□□□□□ -2.27
CBX1P83916 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.86□□□□□ -2.27
CBX1P83916 RNU1-36P-201ENST00000365130 165 ntBASIC0.86□□□□□ -2.27
CBX1P83916 Y_RNA.364-201ENST00000365532 101 ntBASIC0.86□□□□□ -2.27
CBX1P83916 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.86□□□□□ -2.27
CBX1P83916 RNU6-1145P-201ENST00000384246 107 ntBASIC0.86□□□□□ -2.27
CBX1P83916 MIR200A-201ENST00000384875 90 ntBASIC0.86□□□□□ -2.27
CBX1P83916 RNU6-700P-201ENST00000391043 107 ntBASIC0.86□□□□□ -2.27
CBX1P83916 AL137792.2-201ENST00000443484 235 ntBASIC0.86□□□□□ -2.27
CBX1P83916 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.86□□□□□ -2.27
CBX1P83916 RNU7-87P-201ENST00000459343 62 ntBASIC0.86□□□□□ -2.27
CBX1P83916 HMGN1P7-201ENST00000491722 313 ntBASIC0.86□□□□□ -2.27
CBX1P83916 PDCD5P2-201ENST00000507570 312 ntBASIC0.86□□□□□ -2.27
CBX1P83916 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms