Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 Y_RNA.2-201ENST00000362330 96 ntBASIC1.22□□□□□ -2.21
SRP54P61011 RNY1P16-201ENST00000363063 111 ntBASIC1.22□□□□□ -2.21
SRP54P61011 RNU1-22P-201ENST00000363334 158 ntBASIC1.22□□□□□ -2.21
SRP54P61011 SNORA25.8-201ENST00000364831 128 ntBASIC1.22□□□□□ -2.21
SRP54P61011 MIR562-201ENST00000384894 95 ntBASIC1.22□□□□□ -2.21
SRP54P61011 MIR499A-201ENST00000384903 122 ntBASIC1.22□□□□□ -2.21
SRP54P61011 MTCYBP4-201ENST00000401524 249 ntBASIC1.22□□□□□ -2.21
SRP54P61011 MIR1287-201ENST00000408492 90 ntBASIC1.22□□□□□ -2.21
SRP54P61011 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.22□□□□□ -2.21
SRP54P61011 Y_RNA.670-201ENST00000516255 105 ntBASIC1.22□□□□□ -2.21
SRP54P61011 AC027419.1-201ENST00000522976 328 ntBASIC1.22□□□□□ -2.21
SRP54P61011 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.22□□□□□ -2.21
SRP54P61011 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.22□□□□□ -2.21
SRP54P61011 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.22□□□□□ -2.21
SRP54P61011 AL021879.1-201ENST00000611756 288 ntBASIC1.22□□□□□ -2.21
SRP54P61011 AC104260.1-201ENST00000616660 539 ntBASIC1.22□□□□□ -2.21
SRP54P61011 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
SRP54P61011 MIR410-201ENST00000362222 80 ntBASIC1.21□□□□□ -2.22
SRP54P61011 RNU6-1145P-201ENST00000384246 107 ntBASIC1.21□□□□□ -2.22
SRP54P61011 Y_RNA.482-201ENST00000384377 111 ntBASIC1.21□□□□□ -2.22
SRP54P61011 RNU6-601P-201ENST00000384540 107 ntBASIC1.21□□□□□ -2.22
SRP54P61011 MIR660-201ENST00000385235 97 ntBASIC1.21□□□□□ -2.22
SRP54P61011 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.21□□□□□ -2.22
SRP54P61011 ELOCP21-201ENST00000412558 336 ntBASIC1.21□□□□□ -2.22
SRP54P61011 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.21□□□□□ -2.22
SRP54P61011 RN7SKP179-201ENST00000516126 217 ntBASIC1.21□□□□□ -2.22
SRP54P61011 RNU7-172P-201ENST00000517125 64 ntBASIC1.21□□□□□ -2.22
SRP54P61011 AC005899.2-201ENST00000584353 90 ntBASIC1.21□□□□□ -2.22
SRP54P61011 SNORD3E-202ENST00000627253 216 ntBASIC1.21□□□□□ -2.22
SRP54P61011 MIR6079-201ENST00000635807 62 ntBASIC1.21□□□□□ -2.22
SRP54P61011 AC099654.5-201ENST00000636479 350 ntBASIC1.21□□□□□ -2.22
SRP54P61011 AC073544.1-201ENST00000600110 1595 ntBASIC1.21□□□□□ -2.22
SRP54P61011 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.2□□□□□ -2.22
SRP54P61011 RNA5SP327-201ENST00000362494 101 ntBASIC1.2□□□□□ -2.22
SRP54P61011 Y_RNA.339-201ENST00000365325 102 ntBASIC1.2□□□□□ -2.22
SRP54P61011 SNORA20B-201ENST00000384220 132 ntBASIC1.2□□□□□ -2.22
SRP54P61011 Y_RNA.473-201ENST00000384333 102 ntBASIC1.2□□□□□ -2.22
SRP54P61011 MIR618-201ENST00000385287 98 ntBASIC1.2□□□□□ -2.22
SRP54P61011 FCF1P9-201ENST00000412546 282 ntBASIC1.2□□□□□ -2.22
SRP54P61011 RPL37P10-201ENST00000412884 288 ntBASIC1.2□□□□□ -2.22
SRP54P61011 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.2□□□□□ -2.22
SRP54P61011 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.2□□□□□ -2.22
SRP54P61011 RNU6-358P-201ENST00000516564 75 ntBASIC1.2□□□□□ -2.22
SRP54P61011 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.2□□□□□ -2.22
SRP54P61011 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.2□□□□□ -2.22
SRP54P61011 RPL21P9-201ENST00000556149 474 ntBASIC1.2□□□□□ -2.22
SRP54P61011 AC068338.1-201ENST00000565567 176 ntBASIC1.2□□□□□ -2.22
SRP54P61011 AC009229.3-201ENST00000608056 282 ntBASIC1.2□□□□□ -2.22
SRP54P61011 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
SRP54P61011 RNU6-505P-201ENST00000384427 107 ntBASIC1.19□□□□□ -2.22
SRP54P61011 AL355796.1-201ENST00000406706 323 ntBASIC1.19□□□□□ -2.22
SRP54P61011 MIR1276-201ENST00000408707 83 ntBASIC1.19□□□□□ -2.22
SRP54P61011 STAG3L5P-204ENST00000443759 179 ntBASIC1.19□□□□□ -2.22
SRP54P61011 RPS29P29-201ENST00000456396 171 ntBASIC1.19□□□□□ -2.22
SRP54P61011 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.19□□□□□ -2.22
SRP54P61011 RNU7-87P-201ENST00000459343 62 ntBASIC1.19□□□□□ -2.22
SRP54P61011 AC092991.1-201ENST00000477176 376 ntBASIC1.19□□□□□ -2.22
SRP54P61011 AC093852.1-201ENST00000503587 266 ntBASIC1.19□□□□□ -2.22
SRP54P61011 AC116353.2-201ENST00000505332 712 ntBASIC1.19□□□□□ -2.22
SRP54P61011 AC018710.1-201ENST00000506509 158 ntBASIC1.19□□□□□ -2.22
SRP54P61011 RN7SKP49-201ENST00000516675 260 ntBASIC1.19□□□□□ -2.22
SRP54P61011 RNU6-307P-201ENST00000516743 106 ntBASIC1.19□□□□□ -2.22
SRP54P61011 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.19□□□□□ -2.22
SRP54P61011 AC011712.1-201ENST00000588959 234 ntBASIC1.19□□□□□ -2.22
SRP54P61011 AL513534.2-201ENST00000603836 250 ntBASIC1.19□□□□□ -2.22
SRP54P61011 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SRP54P61011 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.18□□□□□ -2.22
SRP54P61011 RNU6-874P-201ENST00000362390 105 ntBASIC1.18□□□□□ -2.22
SRP54P61011 SNORA27.1-201ENST00000362604 124 ntBASIC1.18□□□□□ -2.22
SRP54P61011 RNA5SP361-201ENST00000362686 118 ntBASIC1.18□□□□□ -2.22
SRP54P61011 RNU6-879P-201ENST00000364328 108 ntBASIC1.18□□□□□ -2.22
SRP54P61011 Y_RNA.557-201ENST00000384680 107 ntBASIC1.18□□□□□ -2.22
SRP54P61011 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.18□□□□□ -2.22
SRP54P61011 AL353997.1-201ENST00000432936 108 ntBASIC1.18□□□□□ -2.22
SRP54P61011 PCNPP5-201ENST00000452246 481 ntBASIC1.18□□□□□ -2.22
SRP54P61011 SUMO1P2-201ENST00000452524 304 ntBASIC1.18□□□□□ -2.22
SRP54P61011 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.18□□□□□ -2.22
SRP54P61011 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.18□□□□□ -2.22
SRP54P61011 RNU7-28P-201ENST00000516759 62 ntBASIC1.18□□□□□ -2.22
SRP54P61011 RNA5SP102-201ENST00000516865 106 ntBASIC1.18□□□□□ -2.22
SRP54P61011 AC018448.1-201ENST00000552843 316 ntBASIC1.18□□□□□ -2.22
SRP54P61011 AL357075.2-201ENST00000614906 189 ntBASIC1.18□□□□□ -2.22
SRP54P61011 RNU4-76P-201ENST00000364509 141 ntBASIC1.17□□□□□ -2.22
SRP54P61011 MRPL35P3-201ENST00000421557 364 ntBASIC1.17□□□□□ -2.22
SRP54P61011 AC018865.2-201ENST00000423631 129 ntBASIC1.17□□□□□ -2.22
SRP54P61011 FGF7P6-202ENST00000451282 293 ntBASIC1.17□□□□□ -2.22
SRP54P61011 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.17□□□□□ -2.22
SRP54P61011 AC069439.1-201ENST00000494739 167 ntBASIC1.17□□□□□ -2.22
SRP54P61011 RNA5SP20-201ENST00000515976 84 ntBASIC1.17□□□□□ -2.22
SRP54P61011 RNU6-341P-201ENST00000516973 96 ntBASIC1.17□□□□□ -2.22
SRP54P61011 AC080078.3-201ENST00000605407 463 ntBASIC1.17□□□□□ -2.22
SRP54P61011 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.17□□□□□ -2.22
SRP54P61011 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.17□□□□□ -2.22
SRP54P61011 PISRT1.1-201ENST00000616930 107 ntBASIC1.17□□□□□ -2.22
SRP54P61011 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.17□□□□□ -2.22
SRP54P61011 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SRP54P61011 Y_RNA.88-201ENST00000363029 99 ntBASIC1.16□□□□□ -2.22
SRP54P61011 Y_RNA.265-201ENST00000364677 108 ntBASIC1.16□□□□□ -2.22
SRP54P61011 SNORA70.7-201ENST00000384159 133 ntBASIC1.16□□□□□ -2.22
SRP54P61011 Y_RNA.498-201ENST00000384460 102 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms