Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 RNU6-727P-201ENST00000363592 107 ntBASIC0.31□□□□□ -2.36
ACTBP60709 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
ACTBP60709 RNU6-1237P-201ENST00000384777 107 ntBASIC0.31□□□□□ -2.36
ACTBP60709 EIF4E2P1-201ENST00000393781 255 ntBASIC0.31□□□□□ -2.36
ACTBP60709 AC244098.3-201ENST00000424803 96 ntBASIC0.31□□□□□ -2.36
ACTBP60709 AC091885.1-201ENST00000506658 268 ntBASIC0.31□□□□□ -2.36
ACTBP60709 RN7SKP12-201ENST00000516275 143 ntBASIC0.31□□□□□ -2.36
ACTBP60709 AC040904.1-201ENST00000590850 223 ntBASIC0.31□□□□□ -2.36
ACTBP60709 AC092807.2-201ENST00000609367 243 ntBASIC0.31□□□□□ -2.36
ACTBP60709 AC093913.1-201ENST00000614178 329 ntBASIC0.31□□□□□ -2.36
ACTBP60709 AC007014.2-201ENST00000615581 479 ntBASIC0.31□□□□□ -2.36
ACTBP60709 AL603755.1-201ENST00000619504 163 ntBASIC0.31□□□□□ -2.36
ACTBP60709 AC010487.4-201ENST00000637027 61 ntBASIC0.31□□□□□ -2.36
ACTBP60709 AC121333.1-201ENST00000567488 2709 ntBASIC0.3□□□□□ -2.36
ACTBP60709 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
ACTBP60709 RNU6-280P-201ENST00000364145 104 ntBASIC0.3□□□□□ -2.36
ACTBP60709 MIR514A2-201ENST00000385131 88 ntBASIC0.3□□□□□ -2.36
ACTBP60709 MIR514A3-201ENST00000385132 88 ntBASIC0.3□□□□□ -2.36
ACTBP60709 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
ACTBP60709 AL590002.1-201ENST00000406554 418 ntBASIC0.3□□□□□ -2.36
ACTBP60709 MIR1185-1-201ENST00000408598 86 ntBASIC0.3□□□□□ -2.36
ACTBP60709 RNU5A-5P-201ENST00000411054 116 ntBASIC0.3□□□□□ -2.36
ACTBP60709 RPS20P10-201ENST00000451209 253 ntBASIC0.3□□□□□ -2.36
ACTBP60709 AC107401.1-201ENST00000503426 685 ntBASIC0.3□□□□□ -2.36
ACTBP60709 RNU4-57P-201ENST00000515980 135 ntBASIC0.3□□□□□ -2.36
ACTBP60709 AC091144.1-201ENST00000519573 138 ntBASIC0.3□□□□□ -2.36
ACTBP60709 AL358944.1-201ENST00000528537 144 ntBASIC0.3□□□□□ -2.36
ACTBP60709 MIR4528-201ENST00000577763 90 ntBASIC0.3□□□□□ -2.36
ACTBP60709 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.3□□□□□ -2.36
ACTBP60709 AC009248.2-201ENST00000619826 254 ntBASIC0.3□□□□□ -2.36
ACTBP60709 AC073534.2-201ENST00000620377 381 ntBASIC0.3□□□□□ -2.36
ACTBP60709 AC006504.8-201ENST00000621046 635 ntBASIC0.3□□□□□ -2.36
ACTBP60709 AL008636.1-201ENST00000625038 1018 ntBASIC0.3□□□□□ -2.36
ACTBP60709 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.29□□□□□ -2.36
ACTBP60709 MIR103A2-201ENST00000362154 78 ntBASIC0.29□□□□□ -2.36
ACTBP60709 RNU5F-3P-201ENST00000363767 117 ntBASIC0.29□□□□□ -2.36
ACTBP60709 Y_RNA.184-201ENST00000363884 108 ntBASIC0.29□□□□□ -2.36
ACTBP60709 VTRNA1-3-201ENST00000365645 89 ntBASIC0.29□□□□□ -2.36
ACTBP60709 Y_RNA.381-201ENST00000365666 102 ntBASIC0.29□□□□□ -2.36
ACTBP60709 RNU6-1067P-201ENST00000384752 107 ntBASIC0.29□□□□□ -2.36
ACTBP60709 RNU1-119P-201ENST00000391122 165 ntBASIC0.29□□□□□ -2.36
ACTBP60709 RNA5SP193-201ENST00000410353 107 ntBASIC0.29□□□□□ -2.36
ACTBP60709 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.29□□□□□ -2.36
ACTBP60709 Z98949.2-201ENST00000440996 144 ntBASIC0.29□□□□□ -2.36
ACTBP60709 DAP3P1-201ENST00000441522 278 ntBASIC0.29□□□□□ -2.36
ACTBP60709 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
ACTBP60709 RN7SKP287-201ENST00000516546 266 ntBASIC0.29□□□□□ -2.36
ACTBP60709 RNU6-1332P-201ENST00000516666 104 ntBASIC0.29□□□□□ -2.36
ACTBP60709 RPL21P9-201ENST00000556149 474 ntBASIC0.29□□□□□ -2.36
ACTBP60709 AC023827.1-201ENST00000569247 97 ntBASIC0.29□□□□□ -2.36
ACTBP60709 AC010620.1-201ENST00000601088 1102 ntBASIC0.29□□□□□ -2.36
ACTBP60709 AC024933.1-201ENST00000608472 348 ntBASIC0.29□□□□□ -2.36
ACTBP60709 MIR6779-201ENST00000617283 64 ntBASIC0.29□□□□□ -2.36
ACTBP60709 AC027279.3-201ENST00000625055 122 ntBASIC0.29□□□□□ -2.36
ACTBP60709 MTND5P16-201ENST00000460269 1703 ntBASIC0.28□□□□□ -2.36
ACTBP60709 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
ACTBP60709 RNU4-66P-201ENST00000365199 138 ntBASIC0.28□□□□□ -2.36
ACTBP60709 Y_RNA.330-201ENST00000365230 109 ntBASIC0.28□□□□□ -2.36
ACTBP60709 SNORA20B-201ENST00000384220 132 ntBASIC0.28□□□□□ -2.36
ACTBP60709 MIR891A-201ENST00000401237 79 ntBASIC0.28□□□□□ -2.36
ACTBP60709 MRPS18CP6-201ENST00000423587 223 ntBASIC0.28□□□□□ -2.36
ACTBP60709 RNU7-187P-201ENST00000458985 68 ntBASIC0.28□□□□□ -2.36
ACTBP60709 MTCO2P30-201ENST00000503662 364 ntBASIC0.28□□□□□ -2.36
ACTBP60709 RNA5SP401-201ENST00000515920 127 ntBASIC0.28□□□□□ -2.36
ACTBP60709 RN7SKP164-201ENST00000516138 266 ntBASIC0.28□□□□□ -2.36
ACTBP60709 UBL5P4-201ENST00000562584 236 ntBASIC0.28□□□□□ -2.36
ACTBP60709 MIR1273G-201ENST00000577677 100 ntBASIC0.28□□□□□ -2.36
ACTBP60709 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.28□□□□□ -2.36
ACTBP60709 AC093424.1-201ENST00000604999 338 ntBASIC0.28□□□□□ -2.36
ACTBP60709 AP001330.5-201ENST00000607176 411 ntBASIC0.28□□□□□ -2.36
ACTBP60709 7SK.10-201ENST00000621414 298 ntBASIC0.28□□□□□ -2.36
ACTBP60709 Y_RNA.179-201ENST00000363844 90 ntBASIC0.27□□□□□ -2.37
ACTBP60709 Y_RNA.205-201ENST00000364128 113 ntBASIC0.27□□□□□ -2.37
ACTBP60709 RNU6-522P-201ENST00000364497 107 ntBASIC0.27□□□□□ -2.37
ACTBP60709 Y_RNA.267-201ENST00000364679 109 ntBASIC0.27□□□□□ -2.37
ACTBP60709 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.27□□□□□ -2.37
ACTBP60709 AL353572.1-201ENST00000442490 417 ntBASIC0.27□□□□□ -2.37
ACTBP60709 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.27□□□□□ -2.37
ACTBP60709 AC083798.1-201ENST00000472671 131 ntBASIC0.27□□□□□ -2.37
ACTBP60709 RPL30P10-201ENST00000488148 337 ntBASIC0.27□□□□□ -2.37
ACTBP60709 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.27□□□□□ -2.37
ACTBP60709 RNU6-1116P-201ENST00000517269 99 ntBASIC0.27□□□□□ -2.37
ACTBP60709 AC104383.1-201ENST00000530297 370 ntBASIC0.27□□□□□ -2.37
ACTBP60709 AC026371.1-201ENST00000551867 419 ntBASIC0.27□□□□□ -2.37
ACTBP60709 AC005730.3-201ENST00000583067 366 ntBASIC0.27□□□□□ -2.37
ACTBP60709 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
ACTBP60709 AC134026.1-201ENST00000623249 2239 ntBASIC0.26□□□□□ -2.37
ACTBP60709 Y_RNA.169-201ENST00000363745 96 ntBASIC0.26□□□□□ -2.37
ACTBP60709 RNU4-41P-201ENST00000364426 143 ntBASIC0.26□□□□□ -2.37
ACTBP60709 RNU6-128P-201ENST00000383976 107 ntBASIC0.26□□□□□ -2.37
ACTBP60709 AC018865.2-201ENST00000423631 129 ntBASIC0.26□□□□□ -2.37
ACTBP60709 CYCTP-201ENST00000504253 315 ntBASIC0.26□□□□□ -2.37
ACTBP60709 RNU6-1291P-201ENST00000516591 104 ntBASIC0.26□□□□□ -2.37
ACTBP60709 AC036111.3-201ENST00000526389 112 ntBASIC0.26□□□□□ -2.37
ACTBP60709 MTATP6P24-201ENST00000576835 677 ntBASIC0.26□□□□□ -2.37
ACTBP60709 MIR3684-201ENST00000579779 74 ntBASIC0.26□□□□□ -2.37
ACTBP60709 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
ACTBP60709 Y_RNA.1-201ENST00000352915 104 ntBASIC0.25□□□□□ -2.37
ACTBP60709 SNORA27.1-201ENST00000362604 124 ntBASIC0.25□□□□□ -2.37
ACTBP60709 SNORA72.3-201ENST00000365074 132 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms