Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 RN7SL793P-201ENST00000583259 296 ntBASIC0.1□□□□□ -2.39
CLDN12P56749 AL357078.3-201ENST00000607528 618 ntBASIC0.1□□□□□ -2.39
CLDN12P56749 RNU6-94P-201ENST00000607728 107 ntBASIC0.1□□□□□ -2.39
CLDN12P56749 AL008636.1-201ENST00000625038 1018 ntBASIC0.1□□□□□ -2.39
CLDN12P56749 RNU6-553P-201ENST00000364047 96 ntBASIC0.09□□□□□ -2.4
CLDN12P56749 Y_RNA.393-201ENST00000383936 102 ntBASIC0.09□□□□□ -2.4
CLDN12P56749 RNU5A-6P-201ENST00000384136 116 ntBASIC0.09□□□□□ -2.4
CLDN12P56749 MIR520C-201ENST00000385005 87 ntBASIC0.09□□□□□ -2.4
CLDN12P56749 RNU6-159P-201ENST00000391080 106 ntBASIC0.09□□□□□ -2.4
CLDN12P56749 MTCYBP4-201ENST00000401524 249 ntBASIC0.09□□□□□ -2.4
CLDN12P56749 PCNPP5-201ENST00000452246 481 ntBASIC0.09□□□□□ -2.4
CLDN12P56749 AC105313.1-201ENST00000509121 353 ntBASIC0.09□□□□□ -2.4
CLDN12P56749 AC092436.3-201ENST00000511788 257 ntBASIC0.09□□□□□ -2.4
CLDN12P56749 RNU6-1278P-201ENST00000516130 107 ntBASIC0.09□□□□□ -2.4
CLDN12P56749 RNU7-43P-201ENST00000516554 64 ntBASIC0.09□□□□□ -2.4
CLDN12P56749 RNU6-232P-201ENST00000517144 64 ntBASIC0.09□□□□□ -2.4
CLDN12P56749 MIR4514-201ENST00000581410 57 ntBASIC0.09□□□□□ -2.4
CLDN12P56749 MIR5692C1-201ENST00000585309 91 ntBASIC0.09□□□□□ -2.4
CLDN12P56749 AC100812.1-201ENST00000607622 580 ntBASIC0.09□□□□□ -2.4
CLDN12P56749 AL133215.3-201ENST00000609801 448 ntBASIC0.09□□□□□ -2.4
CLDN12P56749 AL158209.2-201ENST00000619266 216 ntBASIC0.09□□□□□ -2.4
CLDN12P56749 AC006504.8-201ENST00000621046 635 ntBASIC0.09□□□□□ -2.4
CLDN12P56749 AC010487.4-201ENST00000637027 61 ntBASIC0.09□□□□□ -2.4
CLDN12P56749 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.4
CLDN12P56749 Y_RNA.179-201ENST00000363844 90 ntBASIC0.08□□□□□ -2.4
CLDN12P56749 RNU4-41P-201ENST00000364426 143 ntBASIC0.08□□□□□ -2.4
CLDN12P56749 RNU6-376P-201ENST00000384731 106 ntBASIC0.08□□□□□ -2.4
CLDN12P56749 CALM2P3-201ENST00000400429 449 ntBASIC0.08□□□□□ -2.4
CLDN12P56749 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
CLDN12P56749 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.08□□□□□ -2.4
CLDN12P56749 MTCO2P16-201ENST00000436962 677 ntBASIC0.08□□□□□ -2.4
CLDN12P56749 AC079354.2-201ENST00000453523 154 ntBASIC0.08□□□□□ -2.4
CLDN12P56749 AC010999.1-201ENST00000611856 324 ntBASIC0.08□□□□□ -2.4
CLDN12P56749 AC015726.2-201ENST00000620112 122 ntBASIC0.08□□□□□ -2.4
CLDN12P56749 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.08□□□□□ -2.4
CLDN12P56749 AC008133.2-201ENST00000624540 351 ntBASIC0.08□□□□□ -2.4
CLDN12P56749 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
CLDN12P56749 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
CLDN12P56749 RNU4-21P-201ENST00000362802 126 ntBASIC0.07□□□□□ -2.4
CLDN12P56749 SNORD50.1-201ENST00000362987 71 ntBASIC0.07□□□□□ -2.4
CLDN12P56749 Y_RNA.159-201ENST00000363674 87 ntBASIC0.07□□□□□ -2.4
CLDN12P56749 SNORA20B-201ENST00000384220 132 ntBASIC0.07□□□□□ -2.4
CLDN12P56749 RNU6-1297P-201ENST00000384415 104 ntBASIC0.07□□□□□ -2.4
CLDN12P56749 RNU6-541P-201ENST00000384709 110 ntBASIC0.07□□□□□ -2.4
CLDN12P56749 MIR573-201ENST00000384964 99 ntBASIC0.07□□□□□ -2.4
CLDN12P56749 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.07□□□□□ -2.4
CLDN12P56749 MRPS10P2-201ENST00000431226 381 ntBASIC0.07□□□□□ -2.4
CLDN12P56749 AL353572.1-201ENST00000442490 417 ntBASIC0.07□□□□□ -2.4
CLDN12P56749 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.07□□□□□ -2.4
CLDN12P56749 AC107401.1-201ENST00000503426 685 ntBASIC0.07□□□□□ -2.4
CLDN12P56749 SNORA19.2-201ENST00000516013 114 ntBASIC0.07□□□□□ -2.4
CLDN12P56749 AC092747.3-201ENST00000603769 301 ntBASIC0.07□□□□□ -2.4
CLDN12P56749 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.07□□□□□ -2.4
CLDN12P56749 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.06□□□□□ -2.4
CLDN12P56749 AC121333.1-201ENST00000567488 2709 ntBASIC0.06□□□□□ -2.4
CLDN12P56749 MIR103A1-201ENST00000362165 78 ntBASIC0.06□□□□□ -2.4
CLDN12P56749 SNORA25.3-201ENST00000363205 127 ntBASIC0.06□□□□□ -2.4
CLDN12P56749 RNU6-727P-201ENST00000363592 107 ntBASIC0.06□□□□□ -2.4
CLDN12P56749 SNORD14.1-201ENST00000365609 90 ntBASIC0.06□□□□□ -2.4
CLDN12P56749 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.06□□□□□ -2.4
CLDN12P56749 MTCO1P20-201ENST00000425366 358 ntBASIC0.06□□□□□ -2.4
CLDN12P56749 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.06□□□□□ -2.4
CLDN12P56749 MTND1P4-201ENST00000435196 415 ntBASIC0.06□□□□□ -2.4
CLDN12P56749 AL392103.1-201ENST00000447000 198 ntBASIC0.06□□□□□ -2.4
CLDN12P56749 AC091885.1-201ENST00000506658 268 ntBASIC0.06□□□□□ -2.4
CLDN12P56749 RNU7-41P-201ENST00000515917 61 ntBASIC0.06□□□□□ -2.4
CLDN12P56749 RNA5SP20-201ENST00000515976 84 ntBASIC0.06□□□□□ -2.4
CLDN12P56749 SNORA62.5-201ENST00000516634 120 ntBASIC0.06□□□□□ -2.4
CLDN12P56749 MTCO2P4-201ENST00000517968 247 ntBASIC0.06□□□□□ -2.4
CLDN12P56749 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.06□□□□□ -2.4
CLDN12P56749 MIR4764-201ENST00000580680 88 ntBASIC0.06□□□□□ -2.4
CLDN12P56749 AF246928.1-201ENST00000623768 87 ntBASIC0.06□□□□□ -2.4
CLDN12P56749 SNORA27.1-201ENST00000362604 124 ntBASIC0.05□□□□□ -2.4
CLDN12P56749 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
CLDN12P56749 Y_RNA.476-201ENST00000384347 108 ntBASIC0.05□□□□□ -2.4
CLDN12P56749 RNY3P10-201ENST00000384764 102 ntBASIC0.05□□□□□ -2.4
CLDN12P56749 MIR136-201ENST00000385207 82 ntBASIC0.05□□□□□ -2.4
CLDN12P56749 AL590002.1-201ENST00000406554 418 ntBASIC0.05□□□□□ -2.4
CLDN12P56749 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.05□□□□□ -2.4
CLDN12P56749 Y_RNA.654-201ENST00000497848 106 ntBASIC0.05□□□□□ -2.4
CLDN12P56749 RNU6-1291P-201ENST00000516591 104 ntBASIC0.05□□□□□ -2.4
CLDN12P56749 RNU6-1116P-201ENST00000517269 99 ntBASIC0.05□□□□□ -2.4
CLDN12P56749 AC091144.1-201ENST00000519573 138 ntBASIC0.05□□□□□ -2.4
CLDN12P56749 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.05□□□□□ -2.4
CLDN12P56749 MIR4431-201ENST00000579990 94 ntBASIC0.05□□□□□ -2.4
CLDN12P56749 MIR4300-201ENST00000581016 96 ntBASIC0.05□□□□□ -2.4
CLDN12P56749 Y_RNA.201-201ENST00000364052 96 ntBASIC0.04□□□□□ -2.4
CLDN12P56749 U8.5-201ENST00000364528 136 ntBASIC0.04□□□□□ -2.4
CLDN12P56749 RNU4-67P-201ENST00000364569 141 ntBASIC0.04□□□□□ -2.4
CLDN12P56749 AC117470.1-201ENST00000381974 330 ntBASIC0.04□□□□□ -2.4
CLDN12P56749 MIR1298-201ENST00000408783 112 ntBASIC0.04□□□□□ -2.4
CLDN12P56749 RNU6-613P-201ENST00000410412 108 ntBASIC0.04□□□□□ -2.4
CLDN12P56749 AC243428.1-201ENST00000421099 264 ntBASIC0.04□□□□□ -2.4
CLDN12P56749 AC018865.2-201ENST00000423631 129 ntBASIC0.04□□□□□ -2.4
CLDN12P56749 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.04□□□□□ -2.4
CLDN12P56749 RNU6-1096P-201ENST00000517089 102 ntBASIC0.04□□□□□ -2.4
CLDN12P56749 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.04□□□□□ -2.4
CLDN12P56749 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.04□□□□□ -2.4
CLDN12P56749 AC011712.1-201ENST00000588959 234 ntBASIC0.04□□□□□ -2.4
CLDN12P56749 MIR6718-201ENST00000616153 80 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms