Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 RPL23AP36-201ENST00000413895 458 ntBASIC2.12□□□□□ -2.07
HDAC4P56524 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.12□□□□□ -2.07
HDAC4P56524 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.12□□□□□ -2.07
HDAC4P56524 MTND5P22-201ENST00000458380 195 ntBASIC2.12□□□□□ -2.07
HDAC4P56524 RNU1-131P-201ENST00000458943 161 ntBASIC2.12□□□□□ -2.07
HDAC4P56524 RNU7-57P-201ENST00000459540 60 ntBASIC2.12□□□□□ -2.07
HDAC4P56524 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.12□□□□□ -2.07
HDAC4P56524 AC108729.3-201ENST00000513484 108 ntBASIC2.12□□□□□ -2.07
HDAC4P56524 RNU6-948P-201ENST00000516374 107 ntBASIC2.12□□□□□ -2.07
HDAC4P56524 AP005660.1-201ENST00000522972 293 ntBASIC2.12□□□□□ -2.07
HDAC4P56524 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.12□□□□□ -2.07
HDAC4P56524 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.12□□□□□ -2.07
HDAC4P56524 AP000942.3-201ENST00000603702 160 ntBASIC2.12□□□□□ -2.07
HDAC4P56524 AL627230.6-201ENST00000611129 280 ntBASIC2.12□□□□□ -2.07
HDAC4P56524 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.12□□□□□ -2.07
HDAC4P56524 Y_RNA.783-201ENST00000613546 102 ntBASIC2.12□□□□□ -2.07
HDAC4P56524 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.12□□□□□ -2.07
HDAC4P56524 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HDAC4P56524 AC009487.4-201ENST00000624969 3585 ntBASIC2.11□□□□□ -2.07
HDAC4P56524 RNU6-23P-201ENST00000363283 107 ntBASIC2.11□□□□□ -2.07
HDAC4P56524 RNU6-937P-201ENST00000384325 106 ntBASIC2.11□□□□□ -2.07
HDAC4P56524 Y_RNA.498-201ENST00000384460 102 ntBASIC2.11□□□□□ -2.07
HDAC4P56524 RNU11-3P-201ENST00000391111 133 ntBASIC2.11□□□□□ -2.07
HDAC4P56524 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HDAC4P56524 RNU6-1199P-201ENST00000411249 104 ntBASIC2.11□□□□□ -2.07
HDAC4P56524 AC096920.1-201ENST00000423991 241 ntBASIC2.11□□□□□ -2.07
HDAC4P56524 AL445646.1-201ENST00000431784 216 ntBASIC2.11□□□□□ -2.07
HDAC4P56524 MRPS35P2-201ENST00000508242 191 ntBASIC2.11□□□□□ -2.07
HDAC4P56524 RNU6-856P-201ENST00000516959 98 ntBASIC2.11□□□□□ -2.07
HDAC4P56524 AC022513.1-201ENST00000624512 117 ntBASIC2.11□□□□□ -2.07
HDAC4P56524 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HDAC4P56524 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HDAC4P56524 WWP1P1-201ENST00000466609 2769 ntBASIC2.11□□□□□ -2.07
HDAC4P56524 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
HDAC4P56524 RNU1-58P-201ENST00000362413 163 ntBASIC2.1□□□□□ -2.07
HDAC4P56524 Y_RNA.133-201ENST00000363428 110 ntBASIC2.1□□□□□ -2.07
HDAC4P56524 Y_RNA.143-201ENST00000363520 106 ntBASIC2.1□□□□□ -2.07
HDAC4P56524 Y_RNA.276-201ENST00000364732 109 ntBASIC2.1□□□□□ -2.07
HDAC4P56524 Y_RNA.439-201ENST00000384119 94 ntBASIC2.1□□□□□ -2.07
HDAC4P56524 Y_RNA.512-201ENST00000384518 102 ntBASIC2.1□□□□□ -2.07
HDAC4P56524 Y_RNA.570-201ENST00000384750 101 ntBASIC2.1□□□□□ -2.07
HDAC4P56524 RNU6-1105P-201ENST00000384774 107 ntBASIC2.1□□□□□ -2.07
HDAC4P56524 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.1□□□□□ -2.07
HDAC4P56524 TOMM22P2-201ENST00000430735 237 ntBASIC2.1□□□□□ -2.07
HDAC4P56524 AL353689.1-201ENST00000438895 199 ntBASIC2.1□□□□□ -2.07
HDAC4P56524 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.1□□□□□ -2.07
HDAC4P56524 RNU6-221P-201ENST00000459541 99 ntBASIC2.1□□□□□ -2.07
HDAC4P56524 MRPS17P9-201ENST00000511924 393 ntBASIC2.1□□□□□ -2.07
HDAC4P56524 RNU6-1053P-201ENST00000515930 101 ntBASIC2.1□□□□□ -2.07
HDAC4P56524 RNU6-1045P-201ENST00000516321 107 ntBASIC2.1□□□□□ -2.07
HDAC4P56524 RNU6-107P-201ENST00000516643 102 ntBASIC2.1□□□□□ -2.07
HDAC4P56524 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.1□□□□□ -2.07
HDAC4P56524 AL117187.1-201ENST00000555482 181 ntBASIC2.1□□□□□ -2.07
HDAC4P56524 MIR3169-201ENST00000578032 83 ntBASIC2.1□□□□□ -2.07
HDAC4P56524 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.1□□□□□ -2.07
HDAC4P56524 MIR5089-201ENST00000580047 84 ntBASIC2.1□□□□□ -2.07
HDAC4P56524 AL590240.4-201ENST00000616908 390 ntBASIC2.1□□□□□ -2.07
HDAC4P56524 snoZ196.1-201ENST00000625269 89 ntBASIC2.1□□□□□ -2.07
HDAC4P56524 MIR3674-201ENST00000636576 68 ntBASIC2.1□□□□□ -2.07
HDAC4P56524 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HDAC4P56524 Y_RNA.140-201ENST00000363474 103 ntBASIC2.09□□□□□ -2.07
HDAC4P56524 Y_RNA.183-201ENST00000363882 113 ntBASIC2.09□□□□□ -2.07
HDAC4P56524 RNA5SP493-201ENST00000364115 91 ntBASIC2.09□□□□□ -2.07
HDAC4P56524 Y_RNA.222-201ENST00000364264 102 ntBASIC2.09□□□□□ -2.07
HDAC4P56524 Y_RNA.459-201ENST00000384251 102 ntBASIC2.09□□□□□ -2.07
HDAC4P56524 RNU6-1109P-201ENST00000391187 107 ntBASIC2.09□□□□□ -2.07
HDAC4P56524 MIR1283-2-201ENST00000408621 87 ntBASIC2.09□□□□□ -2.07
HDAC4P56524 RNU6-57P-201ENST00000411348 103 ntBASIC2.09□□□□□ -2.07
HDAC4P56524 AC060773.1-201ENST00000421698 310 ntBASIC2.09□□□□□ -2.07
HDAC4P56524 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
HDAC4P56524 MTND2P29-201ENST00000438595 412 ntBASIC2.09□□□□□ -2.07
HDAC4P56524 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.09□□□□□ -2.07
HDAC4P56524 LINC01399-202ENST00000458450 244 ntBASIC2.09□□□□□ -2.07
HDAC4P56524 HMGN1P10-201ENST00000474557 553 ntBASIC2.09□□□□□ -2.07
HDAC4P56524 AC098869.1-201ENST00000481627 292 ntBASIC2.09□□□□□ -2.07
HDAC4P56524 AC025465.3-201ENST00000510570 311 ntBASIC2.09□□□□□ -2.07
HDAC4P56524 MIR4300-201ENST00000581016 96 ntBASIC2.09□□□□□ -2.07
HDAC4P56524 AC005034.5-201ENST00000604219 466 ntBASIC2.09□□□□□ -2.07
HDAC4P56524 Y_RNA.772-201ENST00000606692 102 ntBASIC2.09□□□□□ -2.07
HDAC4P56524 AC004467.1-201ENST00000615678 330 ntBASIC2.09□□□□□ -2.07
HDAC4P56524 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.09□□□□□ -2.07
HDAC4P56524 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
HDAC4P56524 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
HDAC4P56524 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HDAC4P56524 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HDAC4P56524 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
HDAC4P56524 Y_RNA.64-201ENST00000362845 102 ntBASIC2.08□□□□□ -2.08
HDAC4P56524 SNORD63-201ENST00000384262 68 ntBASIC2.08□□□□□ -2.08
HDAC4P56524 MIR597-201ENST00000384968 97 ntBASIC2.08□□□□□ -2.08
HDAC4P56524 MIR568-201ENST00000385036 95 ntBASIC2.08□□□□□ -2.08
HDAC4P56524 SNORD115-46-201ENST00000390982 71 ntBASIC2.08□□□□□ -2.08
HDAC4P56524 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.08□□□□□ -2.08
HDAC4P56524 RNU2-12P-201ENST00000517216 168 ntBASIC2.08□□□□□ -2.08
HDAC4P56524 AC025647.1-201ENST00000517879 253 ntBASIC2.08□□□□□ -2.08
HDAC4P56524 MIR4498-201ENST00000577599 66 ntBASIC2.08□□□□□ -2.08
HDAC4P56524 SNRPGP19-201ENST00000603826 189 ntBASIC2.08□□□□□ -2.08
HDAC4P56524 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.07□□□□□ -2.08
HDAC4P56524 SNORD81.1-201ENST00000363064 77 ntBASIC2.07□□□□□ -2.08
HDAC4P56524 RNU6-770P-201ENST00000363929 105 ntBASIC2.07□□□□□ -2.08
HDAC4P56524 Y_RNA.269-201ENST00000364685 89 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms