Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AL606845.1-201ENST00000404881 255 ntBASIC2.8□□□□□ -1.96
GFRA1P56159 MIR1262-201ENST00000408276 93 ntBASIC2.8□□□□□ -1.96
GFRA1P56159 RNA5SP293-201ENST00000410527 113 ntBASIC2.8□□□□□ -1.96
GFRA1P56159 RN7SKP284-201ENST00000411002 343 ntBASIC2.8□□□□□ -1.96
GFRA1P56159 AL121914.1-201ENST00000450188 156 ntBASIC2.8□□□□□ -1.96
GFRA1P56159 ATP5J2P3-201ENST00000451550 258 ntBASIC2.8□□□□□ -1.96
GFRA1P56159 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.8□□□□□ -1.96
GFRA1P56159 S100A11P2-201ENST00000467589 312 ntBASIC2.8□□□□□ -1.96
GFRA1P56159 RN7SL636P-201ENST00000497504 294 ntBASIC2.8□□□□□ -1.96
GFRA1P56159 AC107027.2-201ENST00000512197 115 ntBASIC2.8□□□□□ -1.96
GFRA1P56159 RNU6-406P-201ENST00000516470 107 ntBASIC2.8□□□□□ -1.96
GFRA1P56159 AC104027.1-201ENST00000521887 300 ntBASIC2.8□□□□□ -1.96
GFRA1P56159 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.8□□□□□ -1.96
GFRA1P56159 AC007536.1-201ENST00000533382 349 ntBASIC2.8□□□□□ -1.96
GFRA1P56159 AC004832.5-201ENST00000608677 401 ntBASIC2.8□□□□□ -1.96
GFRA1P56159 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.8□□□□□ -1.96
GFRA1P56159 FAM35CP-201ENST00000554755 2470 ntBASIC2.8□□□□□ -1.96
GFRA1P56159 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
GFRA1P56159 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
GFRA1P56159 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
GFRA1P56159 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
GFRA1P56159 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
GFRA1P56159 RNU6-728P-201ENST00000365375 104 ntBASIC2.79□□□□□ -1.96
GFRA1P56159 RNY3P5-201ENST00000384127 102 ntBASIC2.79□□□□□ -1.96
GFRA1P56159 MIR128-1-201ENST00000384921 82 ntBASIC2.79□□□□□ -1.96
GFRA1P56159 MIR520G-201ENST00000385064 90 ntBASIC2.79□□□□□ -1.96
GFRA1P56159 MT-TT-201ENST00000387460 66 ntBASIC2.79□□□□□ -1.96
GFRA1P56159 RNU6-239P-201ENST00000390990 99 ntBASIC2.79□□□□□ -1.96
GFRA1P56159 RNA5SP496-201ENST00000391240 109 ntBASIC2.79□□□□□ -1.96
GFRA1P56159 RPS4XP11-201ENST00000446897 772 ntBASIC2.79□□□□□ -1.96
GFRA1P56159 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.79□□□□□ -1.96
GFRA1P56159 RNA5SP341-201ENST00000516261 117 ntBASIC2.79□□□□□ -1.96
GFRA1P56159 RNU1-143P-201ENST00000516296 146 ntBASIC2.79□□□□□ -1.96
GFRA1P56159 AC073413.2-201ENST00000604332 360 ntBASIC2.79□□□□□ -1.96
GFRA1P56159 U1.23-201ENST00000610293 146 ntBASIC2.79□□□□□ -1.96
GFRA1P56159 AL359075.3-201ENST00000613288 217 ntBASIC2.79□□□□□ -1.96
GFRA1P56159 RNU1-68P-201ENST00000615382 146 ntBASIC2.79□□□□□ -1.96
GFRA1P56159 U1.39-201ENST00000621562 146 ntBASIC2.79□□□□□ -1.96
GFRA1P56159 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.79□□□□□ -1.96
GFRA1P56159 MIR338-201ENST00000636369 67 ntBASIC2.79□□□□□ -1.96
GFRA1P56159 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.79□□□□□ -1.96
GFRA1P56159 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.78□□□□□ -1.96
GFRA1P56159 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
GFRA1P56159 RNU1-96P-201ENST00000364163 162 ntBASIC2.78□□□□□ -1.96
GFRA1P56159 SNORD114-6-201ENST00000364393 72 ntBASIC2.78□□□□□ -1.96
GFRA1P56159 RNU6-1130P-201ENST00000365434 107 ntBASIC2.78□□□□□ -1.96
GFRA1P56159 RNU7-26P-201ENST00000458980 63 ntBASIC2.78□□□□□ -1.96
GFRA1P56159 RNU7-99P-201ENST00000516271 62 ntBASIC2.78□□□□□ -1.96
GFRA1P56159 RNU6-56P-201ENST00000516986 93 ntBASIC2.78□□□□□ -1.96
GFRA1P56159 MIR2681-201ENST00000581814 105 ntBASIC2.78□□□□□ -1.96
GFRA1P56159 AL162274.2-201ENST00000614406 332 ntBASIC2.78□□□□□ -1.96
GFRA1P56159 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.78□□□□□ -1.96
GFRA1P56159 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
GFRA1P56159 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
GFRA1P56159 SNORA38-201ENST00000363946 132 ntBASIC2.77□□□□□ -1.97
GFRA1P56159 MIR515-2-201ENST00000384883 83 ntBASIC2.77□□□□□ -1.97
GFRA1P56159 MIR515-1-201ENST00000384884 83 ntBASIC2.77□□□□□ -1.97
GFRA1P56159 MIR15B-201ENST00000385045 98 ntBASIC2.77□□□□□ -1.97
GFRA1P56159 SNORD67-201ENST00000390833 111 ntBASIC2.77□□□□□ -1.97
GFRA1P56159 Z92545.1-201ENST00000411782 234 ntBASIC2.77□□□□□ -1.97
GFRA1P56159 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.77□□□□□ -1.97
GFRA1P56159 YWHAEP4-201ENST00000505390 198 ntBASIC2.77□□□□□ -1.97
GFRA1P56159 RNA5SP217-201ENST00000515959 91 ntBASIC2.77□□□□□ -1.97
GFRA1P56159 RNU6-346P-201ENST00000516288 111 ntBASIC2.77□□□□□ -1.97
GFRA1P56159 AC011604.1-201ENST00000545978 196 ntBASIC2.77□□□□□ -1.97
GFRA1P56159 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.77□□□□□ -1.97
GFRA1P56159 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
GFRA1P56159 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
GFRA1P56159 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
GFRA1P56159 AC245060.5-201ENST00000610778 3293 ntBASIC2.76□□□□□ -1.97
GFRA1P56159 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
GFRA1P56159 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.76□□□□□ -1.97
GFRA1P56159 MIR22-201ENST00000362190 85 ntBASIC2.76□□□□□ -1.97
GFRA1P56159 Y_RNA.203-201ENST00000364106 102 ntBASIC2.76□□□□□ -1.97
GFRA1P56159 RNU1-91P-201ENST00000364746 163 ntBASIC2.76□□□□□ -1.97
GFRA1P56159 MIR613-201ENST00000385248 95 ntBASIC2.76□□□□□ -1.97
GFRA1P56159 RNA5SP323-201ENST00000391094 133 ntBASIC2.76□□□□□ -1.97
GFRA1P56159 RN7SKP101-201ENST00000411376 320 ntBASIC2.76□□□□□ -1.97
GFRA1P56159 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.76□□□□□ -1.97
GFRA1P56159 AC018634.1-201ENST00000437554 401 ntBASIC2.76□□□□□ -1.97
GFRA1P56159 TMSB4XP3-201ENST00000445144 114 ntBASIC2.76□□□□□ -1.97
GFRA1P56159 AC023449.1-201ENST00000454464 154 ntBASIC2.76□□□□□ -1.97
GFRA1P56159 RNU1-142P-201ENST00000516682 145 ntBASIC2.76□□□□□ -1.97
GFRA1P56159 RNU6-1096P-201ENST00000517089 102 ntBASIC2.76□□□□□ -1.97
GFRA1P56159 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.76□□□□□ -1.97
GFRA1P56159 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.76□□□□□ -1.97
GFRA1P56159 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.76□□□□□ -1.97
GFRA1P56159 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.76□□□□□ -1.97
GFRA1P56159 MIR3910-1-201ENST00000580936 111 ntBASIC2.76□□□□□ -1.97
GFRA1P56159 AL929325.1-201ENST00000603096 117 ntBASIC2.76□□□□□ -1.97
GFRA1P56159 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.76□□□□□ -1.97
GFRA1P56159 AP006437.1-201ENST00000641440 3685 ntBASIC2.76□□□□□ -1.97
GFRA1P56159 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
GFRA1P56159 SNORA71.1-201ENST00000364523 117 ntBASIC2.75□□□□□ -1.97
GFRA1P56159 RNA5SP467-201ENST00000391274 118 ntBASIC2.75□□□□□ -1.97
GFRA1P56159 AL031121.1-201ENST00000406553 254 ntBASIC2.75□□□□□ -1.97
GFRA1P56159 RPL32P35-201ENST00000415214 394 ntBASIC2.75□□□□□ -1.97
GFRA1P56159 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.75□□□□□ -1.97
GFRA1P56159 SNORA64.4-201ENST00000516632 81 ntBASIC2.75□□□□□ -1.97
GFRA1P56159 AC068657.1-201ENST00000520807 306 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms