Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 C8orf59P2-201ENST00000603441 271 ntBASIC1.64□□□□□ -2.15
CDH13P55290 MIR8081-201ENST00000611533 95 ntBASIC1.64□□□□□ -2.15
CDH13P55290 AC084768.2-201ENST00000622736 221 ntBASIC1.64□□□□□ -2.15
CDH13P55290 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.64□□□□□ -2.15
CDH13P55290 WWP1P1-201ENST00000466609 2769 ntBASIC1.64□□□□□ -2.15
CDH13P55290 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
CDH13P55290 Y_RNA.112-201ENST00000363250 102 ntBASIC1.63□□□□□ -2.15
CDH13P55290 RNU1-22P-201ENST00000363334 158 ntBASIC1.63□□□□□ -2.15
CDH13P55290 RNU6-961P-201ENST00000363893 105 ntBASIC1.63□□□□□ -2.15
CDH13P55290 Y_RNA.509-201ENST00000384506 99 ntBASIC1.63□□□□□ -2.15
CDH13P55290 MIR583-201ENST00000384846 75 ntBASIC1.63□□□□□ -2.15
CDH13P55290 MIR873-201ENST00000401120 77 ntBASIC1.63□□□□□ -2.15
CDH13P55290 MIR1267-201ENST00000408723 78 ntBASIC1.63□□□□□ -2.15
CDH13P55290 SDAD1P3-201ENST00000427380 333 ntBASIC1.63□□□□□ -2.15
CDH13P55290 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.63□□□□□ -2.15
CDH13P55290 AC097462.1-201ENST00000514125 324 ntBASIC1.63□□□□□ -2.15
CDH13P55290 SNORA40.14-201ENST00000516543 86 ntBASIC1.63□□□□□ -2.15
CDH13P55290 AC023157.2-201ENST00000540596 141 ntBASIC1.63□□□□□ -2.15
CDH13P55290 SNORA77B-201ENST00000578179 125 ntBASIC1.63□□□□□ -2.15
CDH13P55290 AC092447.9-201ENST00000603395 144 ntBASIC1.63□□□□□ -2.15
CDH13P55290 AC022217.4-201ENST00000604389 163 ntBASIC1.63□□□□□ -2.15
CDH13P55290 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.63□□□□□ -2.15
CDH13P55290 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.63□□□□□ -2.15
CDH13P55290 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CDH13P55290 MIR424-201ENST00000362227 98 ntBASIC1.62□□□□□ -2.15
CDH13P55290 Y_RNA.361-201ENST00000365515 120 ntBASIC1.62□□□□□ -2.15
CDH13P55290 Y_RNA.395-201ENST00000383945 109 ntBASIC1.62□□□□□ -2.15
CDH13P55290 RPL21P1-201ENST00000399532 476 ntBASIC1.62□□□□□ -2.15
CDH13P55290 RPS20P15-201ENST00000412792 311 ntBASIC1.62□□□□□ -2.15
CDH13P55290 AL161935.2-201ENST00000414627 60 ntBASIC1.62□□□□□ -2.15
CDH13P55290 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.62□□□□□ -2.15
CDH13P55290 HSPE1P21-201ENST00000438283 308 ntBASIC1.62□□□□□ -2.15
CDH13P55290 snoU13.9-201ENST00000458927 103 ntBASIC1.62□□□□□ -2.15
CDH13P55290 RNA5SP20-201ENST00000515976 84 ntBASIC1.62□□□□□ -2.15
CDH13P55290 Y_RNA.661-201ENST00000516003 99 ntBASIC1.62□□□□□ -2.15
CDH13P55290 RNU2-12P-201ENST00000517216 168 ntBASIC1.62□□□□□ -2.15
CDH13P55290 AC023442.1-201ENST00000531247 422 ntBASIC1.62□□□□□ -2.15
CDH13P55290 HSBP1P1-201ENST00000555205 166 ntBASIC1.62□□□□□ -2.15
CDH13P55290 DEFB122-202ENST00000569013 197 ntBASIC1.62□□□□□ -2.15
CDH13P55290 MIR4709-201ENST00000577272 72 ntBASIC1.62□□□□□ -2.15
CDH13P55290 AL080274.1-201ENST00000605565 220 ntBASIC1.62□□□□□ -2.15
CDH13P55290 AC004467.1-201ENST00000615678 330 ntBASIC1.62□□□□□ -2.15
CDH13P55290 AC010205.1-201ENST00000616668 449 ntBASIC1.62□□□□□ -2.15
CDH13P55290 AL606534.2-204ENST00000635008 178 ntBASIC1.62□□□□□ -2.15
CDH13P55290 AC018630.2-201ENST00000534866 2403 ntBASIC1.61□□□□□ -2.15
CDH13P55290 RNU6-926P-201ENST00000384075 107 ntBASIC1.61□□□□□ -2.15
CDH13P55290 MIR562-201ENST00000384894 95 ntBASIC1.61□□□□□ -2.15
CDH13P55290 RNA5SP109-201ENST00000391010 116 ntBASIC1.61□□□□□ -2.15
CDH13P55290 AC096644.2-201ENST00000429278 159 ntBASIC1.61□□□□□ -2.15
CDH13P55290 AC005002.2-201ENST00000438228 269 ntBASIC1.61□□□□□ -2.15
CDH13P55290 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.61□□□□□ -2.15
CDH13P55290 RNU4-77P-201ENST00000516692 156 ntBASIC1.61□□□□□ -2.15
CDH13P55290 RNU7-172P-201ENST00000517125 64 ntBASIC1.61□□□□□ -2.15
CDH13P55290 AC027419.1-201ENST00000522976 328 ntBASIC1.61□□□□□ -2.15
CDH13P55290 CBX3P4-201ENST00000538909 354 ntBASIC1.61□□□□□ -2.15
CDH13P55290 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.61□□□□□ -2.15
CDH13P55290 MIR4659A-201ENST00000580269 81 ntBASIC1.61□□□□□ -2.15
CDH13P55290 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.61□□□□□ -2.15
CDH13P55290 AC240442.1-201ENST00000616055 283 ntBASIC1.61□□□□□ -2.15
CDH13P55290 AC104985.2-201ENST00000620598 500 ntBASIC1.61□□□□□ -2.15
CDH13P55290 U6.92-201ENST00000636464 89 ntBASIC1.61□□□□□ -2.15
CDH13P55290 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.6□□□□□ -2.15
CDH13P55290 Y_RNA.230-201ENST00000364348 109 ntBASIC1.6□□□□□ -2.15
CDH13P55290 SNORA4.2-201ENST00000365313 147 ntBASIC1.6□□□□□ -2.15
CDH13P55290 RNU6-338P-201ENST00000383888 105 ntBASIC1.6□□□□□ -2.15
CDH13P55290 Y_RNA.526-201ENST00000384572 110 ntBASIC1.6□□□□□ -2.15
CDH13P55290 MRPL42P3-201ENST00000401492 326 ntBASIC1.6□□□□□ -2.15
CDH13P55290 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.6□□□□□ -2.15
CDH13P55290 AL606517.2-201ENST00000442855 241 ntBASIC1.6□□□□□ -2.15
CDH13P55290 AL137792.2-201ENST00000443484 235 ntBASIC1.6□□□□□ -2.15
CDH13P55290 Y_RNA.639-201ENST00000458981 102 ntBASIC1.6□□□□□ -2.15
CDH13P55290 AC093852.1-201ENST00000503587 266 ntBASIC1.6□□□□□ -2.15
CDH13P55290 RNU6-475P-201ENST00000516073 104 ntBASIC1.6□□□□□ -2.15
CDH13P55290 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.6□□□□□ -2.15
CDH13P55290 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.6□□□□□ -2.15
CDH13P55290 RPL21P9-201ENST00000556149 474 ntBASIC1.6□□□□□ -2.15
CDH13P55290 MIR5188-201ENST00000583467 113 ntBASIC1.6□□□□□ -2.15
CDH13P55290 AC005176.2-201ENST00000596933 147 ntBASIC1.6□□□□□ -2.15
CDH13P55290 AC006380.1-201ENST00000603598 186 ntBASIC1.6□□□□□ -2.15
CDH13P55290 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.6□□□□□ -2.15
CDH13P55290 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
CDH13P55290 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CDH13P55290 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CDH13P55290 RNU6-626P-201ENST00000363354 107 ntBASIC1.59□□□□□ -2.15
CDH13P55290 SNORD42.2-201ENST00000365570 69 ntBASIC1.59□□□□□ -2.15
CDH13P55290 MIR194-1-201ENST00000384892 85 ntBASIC1.59□□□□□ -2.15
CDH13P55290 U8.13-201ENST00000390842 128 ntBASIC1.59□□□□□ -2.15
CDH13P55290 RNU2-54P-201ENST00000410299 190 ntBASIC1.59□□□□□ -2.15
CDH13P55290 RN7SKP200-201ENST00000410564 320 ntBASIC1.59□□□□□ -2.15
CDH13P55290 AC245047.3-201ENST00000429428 127 ntBASIC1.59□□□□□ -2.15
CDH13P55290 AL160004.2-201ENST00000432935 350 ntBASIC1.59□□□□□ -2.15
CDH13P55290 RPS26P55-201ENST00000471178 356 ntBASIC1.59□□□□□ -2.15
CDH13P55290 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.59□□□□□ -2.15
CDH13P55290 SNORA70.12-201ENST00000516084 153 ntBASIC1.59□□□□□ -2.15
CDH13P55290 RNU6-1278P-201ENST00000516130 107 ntBASIC1.59□□□□□ -2.15
CDH13P55290 RNU6-250P-201ENST00000516958 103 ntBASIC1.59□□□□□ -2.15
CDH13P55290 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.59□□□□□ -2.15
CDH13P55290 AL162424.1-201ENST00000602325 221 ntBASIC1.59□□□□□ -2.15
CDH13P55290 AC016925.2-201ENST00000605108 242 ntBASIC1.59□□□□□ -2.15
CDH13P55290 AL050343.2-201ENST00000607338 280 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms