Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC108210.2-201ENST00000503681 201 ntBASIC1.79□□□□□ -2.12
CDH11P55287 RNU6-897P-201ENST00000517135 105 ntBASIC1.79□□□□□ -2.12
CDH11P55287 DEFB122-202ENST00000569013 197 ntBASIC1.79□□□□□ -2.12
CDH11P55287 AC005786.1-201ENST00000588553 154 ntBASIC1.79□□□□□ -2.12
CDH11P55287 AL355297.3-201ENST00000604082 446 ntBASIC1.79□□□□□ -2.12
CDH11P55287 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CDH11P55287 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CDH11P55287 Y_RNA.105-201ENST00000363182 111 ntBASIC1.78□□□□□ -2.12
CDH11P55287 Y_RNA.214-201ENST00000364201 112 ntBASIC1.78□□□□□ -2.12
CDH11P55287 Y_RNA.276-201ENST00000364732 109 ntBASIC1.78□□□□□ -2.12
CDH11P55287 RNU6-1240P-201ENST00000365155 104 ntBASIC1.78□□□□□ -2.12
CDH11P55287 Y_RNA.439-201ENST00000384119 94 ntBASIC1.78□□□□□ -2.12
CDH11P55287 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CDH11P55287 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.78□□□□□ -2.12
CDH11P55287 AC008134.1-201ENST00000420943 193 ntBASIC1.78□□□□□ -2.12
CDH11P55287 ATP5J2P3-201ENST00000451550 258 ntBASIC1.78□□□□□ -2.12
CDH11P55287 snoU13.23-201ENST00000458863 104 ntBASIC1.78□□□□□ -2.12
CDH11P55287 RNA5SP233-201ENST00000459153 113 ntBASIC1.78□□□□□ -2.12
CDH11P55287 RNU6-1041P-201ENST00000516254 102 ntBASIC1.78□□□□□ -2.12
CDH11P55287 AC006504.6-201ENST00000590142 199 ntBASIC1.78□□□□□ -2.12
CDH11P55287 AC005176.2-201ENST00000596933 147 ntBASIC1.78□□□□□ -2.12
CDH11P55287 AL096840.1-201ENST00000603287 93 ntBASIC1.78□□□□□ -2.12
CDH11P55287 AC012493.3-201ENST00000604494 112 ntBASIC1.78□□□□□ -2.12
CDH11P55287 AC022441.3-201ENST00000605737 136 ntBASIC1.78□□□□□ -2.12
CDH11P55287 AC006001.4-201ENST00000622243 395 ntBASIC1.78□□□□□ -2.12
CDH11P55287 U6.115-201ENST00000636045 103 ntBASIC1.78□□□□□ -2.12
CDH11P55287 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
CDH11P55287 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
CDH11P55287 RNA5SP432-201ENST00000362480 116 ntBASIC1.77□□□□□ -2.13
CDH11P55287 snoU2-30.2-201ENST00000362805 70 ntBASIC1.77□□□□□ -2.13
CDH11P55287 Y_RNA.143-201ENST00000363520 106 ntBASIC1.77□□□□□ -2.13
CDH11P55287 Y_RNA.183-201ENST00000363882 113 ntBASIC1.77□□□□□ -2.13
CDH11P55287 SNORD115-30-201ENST00000364117 82 ntBASIC1.77□□□□□ -2.13
CDH11P55287 SNORA48.1-201ENST00000390879 135 ntBASIC1.77□□□□□ -2.13
CDH11P55287 RPL21P1-201ENST00000399532 476 ntBASIC1.77□□□□□ -2.13
CDH11P55287 RNU6-121P-201ENST00000410525 99 ntBASIC1.77□□□□□ -2.13
CDH11P55287 RNA5SP501-201ENST00000410990 112 ntBASIC1.77□□□□□ -2.13
CDH11P55287 ELOCP20-201ENST00000422460 345 ntBASIC1.77□□□□□ -2.13
CDH11P55287 AL591806.2-201ENST00000433122 173 ntBASIC1.77□□□□□ -2.13
CDH11P55287 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
CDH11P55287 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.77□□□□□ -2.13
CDH11P55287 RNVU1-2-201ENST00000516326 135 ntBASIC1.77□□□□□ -2.13
CDH11P55287 RNU6-1046P-201ENST00000516538 107 ntBASIC1.77□□□□□ -2.13
CDH11P55287 Y_RNA.713-201ENST00000517013 96 ntBASIC1.77□□□□□ -2.13
CDH11P55287 AP005660.1-201ENST00000522972 293 ntBASIC1.77□□□□□ -2.13
CDH11P55287 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.77□□□□□ -2.13
CDH11P55287 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.77□□□□□ -2.13
CDH11P55287 Y_RNA.783-201ENST00000613546 102 ntBASIC1.77□□□□□ -2.13
CDH11P55287 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.77□□□□□ -2.13
CDH11P55287 SDR42E1P4-201ENST00000620894 481 ntBASIC1.77□□□□□ -2.13
CDH11P55287 RNU6-1175P-201ENST00000365200 107 ntBASIC1.76□□□□□ -2.13
CDH11P55287 SNORA20B-201ENST00000384220 132 ntBASIC1.76□□□□□ -2.13
CDH11P55287 RNU6-937P-201ENST00000384325 106 ntBASIC1.76□□□□□ -2.13
CDH11P55287 SNORD115-46-201ENST00000390982 71 ntBASIC1.76□□□□□ -2.13
CDH11P55287 RNU2-54P-201ENST00000410299 190 ntBASIC1.76□□□□□ -2.13
CDH11P55287 RNU2-20P-201ENST00000410425 191 ntBASIC1.76□□□□□ -2.13
CDH11P55287 RNA5SP489-201ENST00000410986 109 ntBASIC1.76□□□□□ -2.13
CDH11P55287 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.76□□□□□ -2.13
CDH11P55287 AL445646.1-201ENST00000431784 216 ntBASIC1.76□□□□□ -2.13
CDH11P55287 AC010598.1-201ENST00000510378 103 ntBASIC1.76□□□□□ -2.13
CDH11P55287 AC025465.3-201ENST00000510570 311 ntBASIC1.76□□□□□ -2.13
CDH11P55287 RNU6-397P-201ENST00000516226 104 ntBASIC1.76□□□□□ -2.13
CDH11P55287 AC131281.1-201ENST00000522984 164 ntBASIC1.76□□□□□ -2.13
CDH11P55287 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.76□□□□□ -2.13
CDH11P55287 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.76□□□□□ -2.13
CDH11P55287 MIR3684-201ENST00000579779 74 ntBASIC1.76□□□□□ -2.13
CDH11P55287 MIR5089-201ENST00000580047 84 ntBASIC1.76□□□□□ -2.13
CDH11P55287 MIR4769-201ENST00000584126 77 ntBASIC1.76□□□□□ -2.13
CDH11P55287 U6.108-201ENST00000637764 58 ntBASIC1.76□□□□□ -2.13
CDH11P55287 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
CDH11P55287 Y_RNA.26-201ENST00000362539 101 ntBASIC1.75□□□□□ -2.13
CDH11P55287 RNU6-862P-201ENST00000362804 105 ntBASIC1.75□□□□□ -2.13
CDH11P55287 SNORA33-201ENST00000363664 130 ntBASIC1.75□□□□□ -2.13
CDH11P55287 RNU1-96P-201ENST00000364163 162 ntBASIC1.75□□□□□ -2.13
CDH11P55287 Y_RNA.446-201ENST00000384178 104 ntBASIC1.75□□□□□ -2.13
CDH11P55287 MIR583-201ENST00000384846 75 ntBASIC1.75□□□□□ -2.13
CDH11P55287 MIR764-201ENST00000390811 85 ntBASIC1.75□□□□□ -2.13
CDH11P55287 AC019129.1-201ENST00000403786 261 ntBASIC1.75□□□□□ -2.13
CDH11P55287 MIR548F4-201ENST00000408515 105 ntBASIC1.75□□□□□ -2.13
CDH11P55287 RNU5A-5P-201ENST00000411054 116 ntBASIC1.75□□□□□ -2.13
CDH11P55287 RPL23AP3-201ENST00000453844 468 ntBASIC1.75□□□□□ -2.13
CDH11P55287 Y_RNA.720-201ENST00000517166 92 ntBASIC1.75□□□□□ -2.13
CDH11P55287 RNU7-128P-201ENST00000517247 62 ntBASIC1.75□□□□□ -2.13
CDH11P55287 SUB1P4-201ENST00000566062 339 ntBASIC1.75□□□□□ -2.13
CDH11P55287 MIR3122-201ENST00000577243 73 ntBASIC1.75□□□□□ -2.13
CDH11P55287 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.75□□□□□ -2.13
CDH11P55287 MIR4300-201ENST00000581016 96 ntBASIC1.75□□□□□ -2.13
CDH11P55287 AC007229.1-201ENST00000590455 412 ntBASIC1.75□□□□□ -2.13
CDH11P55287 AL360085.1-201ENST00000604713 532 ntBASIC1.75□□□□□ -2.13
CDH11P55287 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.75□□□□□ -2.13
CDH11P55287 AC006435.5-201ENST00000624486 112 ntBASIC1.75□□□□□ -2.13
CDH11P55287 AL356292.1-201ENST00000283110 373 ntBASIC1.74□□□□□ -2.13
CDH11P55287 SNORD114-7-201ENST00000362520 77 ntBASIC1.74□□□□□ -2.13
CDH11P55287 SNORD81.1-201ENST00000363064 77 ntBASIC1.74□□□□□ -2.13
CDH11P55287 Y_RNA.145-201ENST00000363527 102 ntBASIC1.74□□□□□ -2.13
CDH11P55287 Y_RNA.210-201ENST00000364161 110 ntBASIC1.74□□□□□ -2.13
CDH11P55287 RNU6-806P-201ENST00000365147 105 ntBASIC1.74□□□□□ -2.13
CDH11P55287 RNU6-417P-201ENST00000384712 107 ntBASIC1.74□□□□□ -2.13
CDH11P55287 CST2P1-201ENST00000425770 87 ntBASIC1.74□□□□□ -2.13
CDH11P55287 AC245047.4-201ENST00000433189 144 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms