Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SNORA2.2-201ENST00000365473 135 ntBASIC0.78□□□□□ -2.28
CDH6P55285 SNORD116-2-201ENST00000384274 95 ntBASIC0.78□□□□□ -2.28
CDH6P55285 RNU6-424P-201ENST00000384367 105 ntBASIC0.78□□□□□ -2.28
CDH6P55285 SNORD116-6-201ENST00000384711 96 ntBASIC0.78□□□□□ -2.28
CDH6P55285 MIR146A-201ENST00000385201 99 ntBASIC0.78□□□□□ -2.28
CDH6P55285 U8.16-201ENST00000391279 133 ntBASIC0.78□□□□□ -2.28
CDH6P55285 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.78□□□□□ -2.28
CDH6P55285 AC093850.1-201ENST00000454121 251 ntBASIC0.78□□□□□ -2.28
CDH6P55285 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.78□□□□□ -2.28
CDH6P55285 AC091021.1-201ENST00000468051 388 ntBASIC0.78□□□□□ -2.28
CDH6P55285 AC010598.1-201ENST00000510378 103 ntBASIC0.78□□□□□ -2.28
CDH6P55285 PSMC1P5-201ENST00000512850 177 ntBASIC0.78□□□□□ -2.28
CDH6P55285 RNU2-56P-201ENST00000516826 190 ntBASIC0.78□□□□□ -2.28
CDH6P55285 RNU7-172P-201ENST00000517125 64 ntBASIC0.78□□□□□ -2.28
CDH6P55285 AC093023.1-201ENST00000547375 507 ntBASIC0.78□□□□□ -2.28
CDH6P55285 AL121579.1-201ENST00000555129 305 ntBASIC0.78□□□□□ -2.28
CDH6P55285 AC068790.6-201ENST00000602558 258 ntBASIC0.78□□□□□ -2.28
CDH6P55285 AF250324.2-201ENST00000608299 610 ntBASIC0.78□□□□□ -2.28
CDH6P55285 AC103591.3-201ENST00000608684 209 ntBASIC0.78□□□□□ -2.28
CDH6P55285 AC024614.3-201ENST00000637860 256 ntBASIC0.78□□□□□ -2.28
CDH6P55285 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CDH6P55285 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.77□□□□□ -2.29
CDH6P55285 SNORA25.9-201ENST00000365087 128 ntBASIC0.77□□□□□ -2.29
CDH6P55285 MIR562-201ENST00000384894 95 ntBASIC0.77□□□□□ -2.29
CDH6P55285 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.77□□□□□ -2.29
CDH6P55285 AC114482.1-201ENST00000418010 247 ntBASIC0.77□□□□□ -2.29
CDH6P55285 USMG5P1-201ENST00000425964 177 ntBASIC0.77□□□□□ -2.29
CDH6P55285 USP9YP16-201ENST00000430287 407 ntBASIC0.77□□□□□ -2.29
CDH6P55285 USP9YP23-201ENST00000455085 407 ntBASIC0.77□□□□□ -2.29
CDH6P55285 RNU6-1114P-201ENST00000516022 107 ntBASIC0.77□□□□□ -2.29
CDH6P55285 RNU7-28P-201ENST00000516759 62 ntBASIC0.77□□□□□ -2.29
CDH6P55285 ZNF299P-201ENST00000406845 1804 ntBASIC0.77□□□□□ -2.29
CDH6P55285 AC005592.1-201ENST00000566527 1640 ntBASIC0.76□□□□□ -2.29
CDH6P55285 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CDH6P55285 RNU6-407P-201ENST00000365280 104 ntBASIC0.76□□□□□ -2.29
CDH6P55285 SNORD114-22-201ENST00000365423 72 ntBASIC0.76□□□□□ -2.29
CDH6P55285 Y_RNA.363-201ENST00000365529 113 ntBASIC0.76□□□□□ -2.29
CDH6P55285 SNORA20B-201ENST00000384220 132 ntBASIC0.76□□□□□ -2.29
CDH6P55285 RNU6-1001P-201ENST00000411265 100 ntBASIC0.76□□□□□ -2.29
CDH6P55285 MTCO3P19-201ENST00000415864 321 ntBASIC0.76□□□□□ -2.29
CDH6P55285 RNU6-506P-201ENST00000516553 94 ntBASIC0.76□□□□□ -2.29
CDH6P55285 RNU6-197P-201ENST00000516680 100 ntBASIC0.76□□□□□ -2.29
CDH6P55285 Y_RNA.706-201ENST00000516933 99 ntBASIC0.76□□□□□ -2.29
CDH6P55285 AC090142.3-201ENST00000519012 385 ntBASIC0.76□□□□□ -2.29
CDH6P55285 MTND2P38-201ENST00000522536 667 ntBASIC0.76□□□□□ -2.29
CDH6P55285 RPL21P9-201ENST00000556149 474 ntBASIC0.76□□□□□ -2.29
CDH6P55285 AC245505.1-201ENST00000556398 224 ntBASIC0.76□□□□□ -2.29
CDH6P55285 MIR4653-201ENST00000585107 83 ntBASIC0.76□□□□□ -2.29
CDH6P55285 FAM106DP-201ENST00000586416 501 ntBASIC0.76□□□□□ -2.29
CDH6P55285 AC106800.4-201ENST00000614905 153 ntBASIC0.76□□□□□ -2.29
CDH6P55285 SNORA1B-201ENST00000362535 133 ntBASIC0.75□□□□□ -2.29
CDH6P55285 Y_RNA.41-201ENST00000362646 102 ntBASIC0.75□□□□□ -2.29
CDH6P55285 Y_RNA.48-201ENST00000362710 103 ntBASIC0.75□□□□□ -2.29
CDH6P55285 RNU6-595P-201ENST00000363944 107 ntBASIC0.75□□□□□ -2.29
CDH6P55285 Y_RNA.191-201ENST00000363972 113 ntBASIC0.75□□□□□ -2.29
CDH6P55285 RNU6-281P-201ENST00000384212 103 ntBASIC0.75□□□□□ -2.29
CDH6P55285 MIR608-201ENST00000384820 100 ntBASIC0.75□□□□□ -2.29
CDH6P55285 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.75□□□□□ -2.29
CDH6P55285 RNU1-139P-201ENST00000391307 165 ntBASIC0.75□□□□□ -2.29
CDH6P55285 AC018865.2-201ENST00000423631 129 ntBASIC0.75□□□□□ -2.29
CDH6P55285 AC104332.1-201ENST00000440471 797 ntBASIC0.75□□□□□ -2.29
CDH6P55285 MTCO2P7-201ENST00000446518 666 ntBASIC0.75□□□□□ -2.29
CDH6P55285 OR9P1P-201ENST00000496431 281 ntBASIC0.75□□□□□ -2.29
CDH6P55285 AC022493.2-201ENST00000506122 481 ntBASIC0.75□□□□□ -2.29
CDH6P55285 RNU7-12P-201ENST00000516030 62 ntBASIC0.75□□□□□ -2.29
CDH6P55285 RNU6-1291P-201ENST00000516591 104 ntBASIC0.75□□□□□ -2.29
CDH6P55285 AC109635.3-201ENST00000529536 185 ntBASIC0.75□□□□□ -2.29
CDH6P55285 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.75□□□□□ -2.29
CDH6P55285 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
CDH6P55285 Y_RNA.106-201ENST00000363189 100 ntBASIC0.74□□□□□ -2.29
CDH6P55285 RNU4-75P-201ENST00000364621 146 ntBASIC0.74□□□□□ -2.29
CDH6P55285 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CDH6P55285 Y_RNA.517-201ENST00000384551 106 ntBASIC0.74□□□□□ -2.29
CDH6P55285 RNU6-376P-201ENST00000384731 106 ntBASIC0.74□□□□□ -2.29
CDH6P55285 MIR520E-201ENST00000384867 87 ntBASIC0.74□□□□□ -2.29
CDH6P55285 MIR100-201ENST00000385259 80 ntBASIC0.74□□□□□ -2.29
CDH6P55285 MIR942-201ENST00000401111 86 ntBASIC0.74□□□□□ -2.29
CDH6P55285 USP9YP30-201ENST00000430729 455 ntBASIC0.74□□□□□ -2.29
CDH6P55285 UQCRBP2-201ENST00000447827 297 ntBASIC0.74□□□□□ -2.29
CDH6P55285 AC046134.1-201ENST00000514454 666 ntBASIC0.74□□□□□ -2.29
CDH6P55285 RNU6-864P-201ENST00000516256 108 ntBASIC0.74□□□□□ -2.29
CDH6P55285 RNU6-1088P-201ENST00000516850 104 ntBASIC0.74□□□□□ -2.29
CDH6P55285 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.74□□□□□ -2.29
CDH6P55285 AC100812.1-201ENST00000607622 580 ntBASIC0.74□□□□□ -2.29
CDH6P55285 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.74□□□□□ -2.29
CDH6P55285 AC008163.1-202ENST00000636004 2889 ntBASIC0.74□□□□□ -2.29
CDH6P55285 MTND5P16-201ENST00000460269 1703 ntBASIC0.73□□□□□ -2.29
CDH6P55285 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.73□□□□□ -2.29
CDH6P55285 RNU6-969P-201ENST00000383900 105 ntBASIC0.73□□□□□ -2.29
CDH6P55285 AC006461.1-201ENST00000412637 326 ntBASIC0.73□□□□□ -2.29
CDH6P55285 RPS3AP1-201ENST00000413190 320 ntBASIC0.73□□□□□ -2.29
CDH6P55285 RPS4XP11-201ENST00000446897 772 ntBASIC0.73□□□□□ -2.29
CDH6P55285 RNA5SP20-201ENST00000515976 84 ntBASIC0.73□□□□□ -2.29
CDH6P55285 RNU6-1314P-201ENST00000517139 104 ntBASIC0.73□□□□□ -2.29
CDH6P55285 RNU1-54P-201ENST00000517181 120 ntBASIC0.73□□□□□ -2.29
CDH6P55285 AC136628.3-201ENST00000521868 290 ntBASIC0.73□□□□□ -2.29
CDH6P55285 DEFB108E-201ENST00000524692 240 ntBASIC0.73□□□□□ -2.29
CDH6P55285 AP002001.1-203ENST00000534002 267 ntBASIC0.73□□□□□ -2.29
CDH6P55285 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.73□□□□□ -2.29
CDH6P55285 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms