Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MIR4431-201ENST00000579990 94 ntBASIC-0.15□□□□□ -2.43
NUP98P52948 Z84480.1-201ENST00000605131 311 ntBASIC-0.15□□□□□ -2.43
NUP98P52948 AC010999.1-201ENST00000611856 324 ntBASIC-0.15□□□□□ -2.43
NUP98P52948 AC015726.2-201ENST00000620112 122 ntBASIC-0.15□□□□□ -2.43
NUP98P52948 SNORD115-8-201ENST00000363856 82 ntBASIC-0.16□□□□□ -2.44
NUP98P52948 SNORD115-38-201ENST00000365037 82 ntBASIC-0.16□□□□□ -2.44
NUP98P52948 AF186996.7-201ENST00000492781 209 ntBASIC-0.16□□□□□ -2.44
NUP98P52948 RPL39P5-202ENST00000512505 151 ntBASIC-0.16□□□□□ -2.44
NUP98P52948 RNU4-5P-201ENST00000607255 135 ntBASIC-0.16□□□□□ -2.44
NUP98P52948 RNU6-94P-201ENST00000607728 107 ntBASIC-0.16□□□□□ -2.44
NUP98P52948 RNU5F-6P-201ENST00000362979 116 ntBASIC-0.17□□□□□ -2.44
NUP98P52948 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.17□□□□□ -2.44
NUP98P52948 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.17□□□□□ -2.44
NUP98P52948 PIGPP3-201ENST00000425307 415 ntBASIC-0.17□□□□□ -2.44
NUP98P52948 MTND4P18-201ENST00000447010 465 ntBASIC-0.17□□□□□ -2.44
NUP98P52948 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.17□□□□□ -2.44
NUP98P52948 AC007684.1-201ENST00000609671 477 ntBASIC-0.17□□□□□ -2.44
NUP98P52948 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.17□□□□□ -2.44
NUP98P52948 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.17□□□□□ -2.44
NUP98P52948 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.17□□□□□ -2.44
NUP98P52948 RNU6-396P-201ENST00000365369 105 ntBASIC-0.17□□□□□ -2.44
NUP98P52948 Y_RNA.367-201ENST00000365544 101 ntBASIC-0.17□□□□□ -2.44
NUP98P52948 SNORD71-201ENST00000411292 86 ntBASIC-0.17□□□□□ -2.44
NUP98P52948 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.17□□□□□ -2.44
NUP98P52948 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.17□□□□□ -2.44
NUP98P52948 AC084290.1-201ENST00000434995 374 ntBASIC-0.17□□□□□ -2.44
NUP98P52948 RNU7-41P-201ENST00000515917 61 ntBASIC-0.17□□□□□ -2.44
NUP98P52948 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.17□□□□□ -2.44
NUP98P52948 RNU6-612P-201ENST00000516909 102 ntBASIC-0.17□□□□□ -2.44
NUP98P52948 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.17□□□□□ -2.44
NUP98P52948 AC026371.1-201ENST00000551867 419 ntBASIC-0.17□□□□□ -2.44
NUP98P52948 FRG2DP-202ENST00000566967 323 ntBASIC-0.17□□□□□ -2.44
NUP98P52948 MIR3682-201ENST00000581338 84 ntBASIC-0.17□□□□□ -2.44
NUP98P52948 AC006504.8-201ENST00000621046 635 ntBASIC-0.17□□□□□ -2.44
NUP98P52948 SNORD118-201ENST00000363593 134 ntBASIC-0.18□□□□□ -2.44
NUP98P52948 RNU6-784P-201ENST00000384330 106 ntBASIC-0.18□□□□□ -2.44
NUP98P52948 MIR1298-201ENST00000408783 112 ntBASIC-0.18□□□□□ -2.44
NUP98P52948 SEPT7P4-201ENST00000437076 306 ntBASIC-0.18□□□□□ -2.44
NUP98P52948 RPS29P15-201ENST00000458329 171 ntBASIC-0.18□□□□□ -2.44
NUP98P52948 RPS3AP17-201ENST00000472594 777 ntBASIC-0.18□□□□□ -2.44
NUP98P52948 AC091951.3-201ENST00000504093 246 ntBASIC-0.18□□□□□ -2.44
NUP98P52948 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.18□□□□□ -2.44
NUP98P52948 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.18□□□□□ -2.44
NUP98P52948 RNU7-172P-201ENST00000517125 64 ntBASIC-0.18□□□□□ -2.44
NUP98P52948 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.18□□□□□ -2.44
NUP98P52948 MTCO3P23-201ENST00000561363 289 ntBASIC-0.18□□□□□ -2.44
NUP98P52948 MIR4703-201ENST00000577728 79 ntBASIC-0.18□□□□□ -2.44
NUP98P52948 AC087683.1-201ENST00000591187 441 ntBASIC-0.18□□□□□ -2.44
NUP98P52948 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.19□□□□□ -2.44
NUP98P52948 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.19□□□□□ -2.44
NUP98P52948 SNORA32.3-201ENST00000384772 121 ntBASIC-0.19□□□□□ -2.44
NUP98P52948 ZNF885P-201ENST00000420174 1098 ntBASIC-0.19□□□□□ -2.44
NUP98P52948 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.19□□□□□ -2.44
NUP98P52948 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.19□□□□□ -2.44
NUP98P52948 AC104850.1-201ENST00000435940 476 ntBASIC-0.19□□□□□ -2.44
NUP98P52948 RNU1-117P-201ENST00000517041 158 ntBASIC-0.19□□□□□ -2.44
NUP98P52948 SNORA74.3-201ENST00000517108 154 ntBASIC-0.19□□□□□ -2.44
NUP98P52948 AL358944.1-201ENST00000528537 144 ntBASIC-0.19□□□□□ -2.44
NUP98P52948 AC112693.2-201ENST00000556538 232 ntBASIC-0.19□□□□□ -2.44
NUP98P52948 AL157392.4-201ENST00000609756 345 ntBASIC-0.19□□□□□ -2.44
NUP98P52948 uc_338.16-201ENST00000621804 95 ntBASIC-0.19□□□□□ -2.44
NUP98P52948 SNORA42.1-201ENST00000363515 137 ntBASIC-0.2□□□□□ -2.44
NUP98P52948 RNU6-137P-201ENST00000363680 108 ntBASIC-0.2□□□□□ -2.44
NUP98P52948 RNU6-280P-201ENST00000364145 104 ntBASIC-0.2□□□□□ -2.44
NUP98P52948 SNORD87-201ENST00000364849 89 ntBASIC-0.2□□□□□ -2.44
NUP98P52948 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.2□□□□□ -2.44
NUP98P52948 RNU6-517P-201ENST00000384362 110 ntBASIC-0.2□□□□□ -2.44
NUP98P52948 RNU6-376P-201ENST00000384731 106 ntBASIC-0.2□□□□□ -2.44
NUP98P52948 RNU7-56P-201ENST00000458744 62 ntBASIC-0.2□□□□□ -2.44
NUP98P52948 RN7SKP164-201ENST00000516138 266 ntBASIC-0.2□□□□□ -2.44
NUP98P52948 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.2□□□□□ -2.44
NUP98P52948 uc_338.6-201ENST00000613544 171 ntBASIC-0.2□□□□□ -2.44
NUP98P52948 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.2□□□□□ -2.44
NUP98P52948 RNU6-815P-201ENST00000384080 113 ntBASIC-0.2□□□□□ -2.44
NUP98P52948 RNU6-636P-201ENST00000384598 107 ntBASIC-0.2□□□□□ -2.44
NUP98P52948 MIR610-201ENST00000385139 96 ntBASIC-0.2□□□□□ -2.44
NUP98P52948 RNU2-29P-201ENST00000410423 189 ntBASIC-0.2□□□□□ -2.44
NUP98P52948 snoU13.21-201ENST00000459368 105 ntBASIC-0.2□□□□□ -2.44
NUP98P52948 AC008873.1-201ENST00000625051 138 ntBASIC-0.2□□□□□ -2.44
NUP98P52948 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
NUP98P52948 RNU6-934P-201ENST00000365154 107 ntBASIC-0.21□□□□□ -2.44
NUP98P52948 RNU6-74P-201ENST00000384235 107 ntBASIC-0.21□□□□□ -2.44
NUP98P52948 RNA5SP496-201ENST00000391240 109 ntBASIC-0.21□□□□□ -2.44
NUP98P52948 RNU6-613P-201ENST00000410412 108 ntBASIC-0.21□□□□□ -2.44
NUP98P52948 MTCO3P19-201ENST00000415864 321 ntBASIC-0.21□□□□□ -2.44
NUP98P52948 MTND1P4-201ENST00000435196 415 ntBASIC-0.21□□□□□ -2.44
NUP98P52948 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.21□□□□□ -2.44
NUP98P52948 AC107401.1-201ENST00000503426 685 ntBASIC-0.21□□□□□ -2.44
NUP98P52948 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.21□□□□□ -2.44
NUP98P52948 SNORA18.7-201ENST00000516910 131 ntBASIC-0.21□□□□□ -2.44
NUP98P52948 MIR4804-201ENST00000581683 73 ntBASIC-0.21□□□□□ -2.44
NUP98P52948 AC104260.1-201ENST00000616660 539 ntBASIC-0.21□□□□□ -2.44
NUP98P52948 AC099654.13-201ENST00000639774 207 ntBASIC-0.21□□□□□ -2.44
NUP98P52948 SNORD68-201ENST00000363214 84 ntBASIC-0.22□□□□□ -2.44
NUP98P52948 SNORD114-28-201ENST00000363610 72 ntBASIC-0.22□□□□□ -2.44
NUP98P52948 RNU6-903P-201ENST00000391270 109 ntBASIC-0.22□□□□□ -2.44
NUP98P52948 MIR1302-7-201ENST00000408841 72 ntBASIC-0.22□□□□□ -2.44
NUP98P52948 RNA5SP266-201ENST00000410273 108 ntBASIC-0.22□□□□□ -2.44
NUP98P52948 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.22□□□□□ -2.44
NUP98P52948 AL139396.1-201ENST00000421137 167 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms