Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RNU1-58P-201ENST00000362413 163 ntBASIC2.1□□□□□ -2.07
CLCN3P51790 Y_RNA.230-201ENST00000364348 109 ntBASIC2.1□□□□□ -2.07
CLCN3P51790 RNU6-926P-201ENST00000384075 107 ntBASIC2.1□□□□□ -2.07
CLCN3P51790 RNU6-102P-201ENST00000384485 104 ntBASIC2.1□□□□□ -2.07
CLCN3P51790 RNU6-713P-201ENST00000384761 107 ntBASIC2.1□□□□□ -2.07
CLCN3P51790 Y_RNA.595-201ENST00000410403 105 ntBASIC2.1□□□□□ -2.07
CLCN3P51790 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.1□□□□□ -2.07
CLCN3P51790 MTCO1P44-201ENST00000441935 243 ntBASIC2.1□□□□□ -2.07
CLCN3P51790 HSPE1P25-201ENST00000455484 251 ntBASIC2.1□□□□□ -2.07
CLCN3P51790 SNORD127-201ENST00000458892 86 ntBASIC2.1□□□□□ -2.07
CLCN3P51790 HMGN2P9-201ENST00000476875 229 ntBASIC2.1□□□□□ -2.07
CLCN3P51790 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.1□□□□□ -2.07
CLCN3P51790 RNA5SP182-201ENST00000516064 82 ntBASIC2.1□□□□□ -2.07
CLCN3P51790 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.1□□□□□ -2.07
CLCN3P51790 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.1□□□□□ -2.07
CLCN3P51790 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.1□□□□□ -2.07
CLCN3P51790 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.1□□□□□ -2.07
CLCN3P51790 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.1□□□□□ -2.07
CLCN3P51790 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.1□□□□□ -2.07
CLCN3P51790 AC062037.2-201ENST00000610137 73 ntBASIC2.1□□□□□ -2.07
CLCN3P51790 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.1□□□□□ -2.07
CLCN3P51790 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLCN3P51790 MIR340-201ENST00000362125 95 ntBASIC2.09□□□□□ -2.07
CLCN3P51790 RNU6-545P-201ENST00000362681 104 ntBASIC2.09□□□□□ -2.07
CLCN3P51790 SNORD81.1-201ENST00000363064 77 ntBASIC2.09□□□□□ -2.07
CLCN3P51790 RNA5SP37-201ENST00000365420 130 ntBASIC2.09□□□□□ -2.07
CLCN3P51790 RNU6-975P-201ENST00000384296 105 ntBASIC2.09□□□□□ -2.07
CLCN3P51790 RNU6-717P-201ENST00000459076 104 ntBASIC2.09□□□□□ -2.07
CLCN3P51790 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.09□□□□□ -2.07
CLCN3P51790 RNU6-966P-201ENST00000516479 104 ntBASIC2.09□□□□□ -2.07
CLCN3P51790 RNU2-19P-201ENST00000517288 84 ntBASIC2.09□□□□□ -2.07
CLCN3P51790 AC018448.1-201ENST00000552843 316 ntBASIC2.09□□□□□ -2.07
CLCN3P51790 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.09□□□□□ -2.07
CLCN3P51790 AC006006.1-201ENST00000603082 144 ntBASIC2.09□□□□□ -2.07
CLCN3P51790 AC012640.5-201ENST00000623897 319 ntBASIC2.09□□□□□ -2.07
CLCN3P51790 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.09□□□□□ -2.07
CLCN3P51790 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
CLCN3P51790 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.09□□□□□ -2.08
CLCN3P51790 AC010615.1-201ENST00000594254 1764 ntBASIC2.08□□□□□ -2.08
CLCN3P51790 MIR335-201ENST00000362173 94 ntBASIC2.08□□□□□ -2.08
CLCN3P51790 RNU6-626P-201ENST00000363354 107 ntBASIC2.08□□□□□ -2.08
CLCN3P51790 Y_RNA.415-201ENST00000384012 112 ntBASIC2.08□□□□□ -2.08
CLCN3P51790 RNU6-20P-201ENST00000384106 107 ntBASIC2.08□□□□□ -2.08
CLCN3P51790 RNU6-1235P-201ENST00000384559 107 ntBASIC2.08□□□□□ -2.08
CLCN3P51790 Y_RNA.541-201ENST00000384640 113 ntBASIC2.08□□□□□ -2.08
CLCN3P51790 Y_RNA.618-201ENST00000410949 107 ntBASIC2.08□□□□□ -2.08
CLCN3P51790 RNU6-1199P-201ENST00000411249 104 ntBASIC2.08□□□□□ -2.08
CLCN3P51790 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.08□□□□□ -2.08
CLCN3P51790 RAB28P5-201ENST00000427490 651 ntBASIC2.08□□□□□ -2.08
CLCN3P51790 MTND2P29-201ENST00000438595 412 ntBASIC2.08□□□□□ -2.08
CLCN3P51790 Y_RNA.638-201ENST00000459374 113 ntBASIC2.08□□□□□ -2.08
CLCN3P51790 RNU6-498P-201ENST00000459468 107 ntBASIC2.08□□□□□ -2.08
CLCN3P51790 AC010531.2-201ENST00000465012 153 ntBASIC2.08□□□□□ -2.08
CLCN3P51790 TRBVB-201ENST00000477100 408 ntBASIC2.08□□□□□ -2.08
CLCN3P51790 AC079804.2-201ENST00000490376 200 ntBASIC2.08□□□□□ -2.08
CLCN3P51790 AC090255.1-201ENST00000495779 349 ntBASIC2.08□□□□□ -2.08
CLCN3P51790 RNU6-948P-201ENST00000516374 107 ntBASIC2.08□□□□□ -2.08
CLCN3P51790 Y_RNA.680-201ENST00000516441 93 ntBASIC2.08□□□□□ -2.08
CLCN3P51790 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.08□□□□□ -2.08
CLCN3P51790 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.08□□□□□ -2.08
CLCN3P51790 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.08□□□□□ -2.08
CLCN3P51790 AP000553.5-201ENST00000641933 54 ntBASIC2.08□□□□□ -2.08
CLCN3P51790 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLCN3P51790 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
CLCN3P51790 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.08□□□□□ -2.08
CLCN3P51790 Y_RNA.14-201ENST00000362415 103 ntBASIC2.07□□□□□ -2.08
CLCN3P51790 SNORD113-8-201ENST00000363497 74 ntBASIC2.07□□□□□ -2.08
CLCN3P51790 U3.8-201ENST00000363675 217 ntBASIC2.07□□□□□ -2.08
CLCN3P51790 Y_RNA.288-201ENST00000364854 92 ntBASIC2.07□□□□□ -2.08
CLCN3P51790 Y_RNA.307-201ENST00000365022 117 ntBASIC2.07□□□□□ -2.08
CLCN3P51790 MIR9-3-201ENST00000385084 90 ntBASIC2.07□□□□□ -2.08
CLCN3P51790 MIR1302-6-201ENST00000408466 90 ntBASIC2.07□□□□□ -2.08
CLCN3P51790 MIR1283-2-201ENST00000408621 87 ntBASIC2.07□□□□□ -2.08
CLCN3P51790 RNU6-1132P-201ENST00000459214 107 ntBASIC2.07□□□□□ -2.08
CLCN3P51790 AC055731.1-201ENST00000474387 401 ntBASIC2.07□□□□□ -2.08
CLCN3P51790 RPS29P11-201ENST00000496507 171 ntBASIC2.07□□□□□ -2.08
CLCN3P51790 RNU1-40P-201ENST00000516816 164 ntBASIC2.07□□□□□ -2.08
CLCN3P51790 RNU1-97P-201ENST00000516872 164 ntBASIC2.07□□□□□ -2.08
CLCN3P51790 RNU6-856P-201ENST00000516959 98 ntBASIC2.07□□□□□ -2.08
CLCN3P51790 MIR5694-201ENST00000581190 76 ntBASIC2.07□□□□□ -2.08
CLCN3P51790 AC022441.3-201ENST00000605737 136 ntBASIC2.07□□□□□ -2.08
CLCN3P51790 AL353997.5-201ENST00000618886 171 ntBASIC2.07□□□□□ -2.08
CLCN3P51790 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.07□□□□□ -2.08
CLCN3P51790 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.07□□□□□ -2.08
CLCN3P51790 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CLCN3P51790 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CLCN3P51790 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLCN3P51790 Y_RNA.101-201ENST00000363154 102 ntBASIC2.06□□□□□ -2.08
CLCN3P51790 RNU6-727P-201ENST00000363592 107 ntBASIC2.06□□□□□ -2.08
CLCN3P51790 RNU6-1305P-201ENST00000364353 104 ntBASIC2.06□□□□□ -2.08
CLCN3P51790 Y_RNA.286-201ENST00000364813 102 ntBASIC2.06□□□□□ -2.08
CLCN3P51790 Y_RNA.361-201ENST00000365515 120 ntBASIC2.06□□□□□ -2.08
CLCN3P51790 RNU6-1264P-201ENST00000383891 107 ntBASIC2.06□□□□□ -2.08
CLCN3P51790 RNU6-482P-201ENST00000391068 107 ntBASIC2.06□□□□□ -2.08
CLCN3P51790 SNORD58.1-201ENST00000391313 66 ntBASIC2.06□□□□□ -2.08
CLCN3P51790 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CLCN3P51790 AL033519.2-201ENST00000403958 392 ntBASIC2.06□□□□□ -2.08
CLCN3P51790 RNU2-38P-201ENST00000410856 79 ntBASIC2.06□□□□□ -2.08
CLCN3P51790 RNU5A-5P-201ENST00000411054 116 ntBASIC2.06□□□□□ -2.08
CLCN3P51790 AL353689.1-201ENST00000438895 199 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms