Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 MIR4446-201ENST00000578505 67 ntBASIC2.99□□□□□ -1.93
MRE11P49959 MIR3910-1-201ENST00000580936 111 ntBASIC2.99□□□□□ -1.93
MRE11P49959 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.99□□□□□ -1.93
MRE11P49959 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.99□□□□□ -1.93
MRE11P49959 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.99□□□□□ -1.93
MRE11P49959 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.99□□□□□ -1.93
MRE11P49959 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.99□□□□□ -1.93
MRE11P49959 RNU6-859P-201ENST00000362728 107 ntBASIC2.98□□□□□ -1.93
MRE11P49959 Y_RNA.170-201ENST00000363746 110 ntBASIC2.98□□□□□ -1.93
MRE11P49959 RNU6-324P-201ENST00000363957 106 ntBASIC2.98□□□□□ -1.93
MRE11P49959 RNU6-851P-201ENST00000384565 107 ntBASIC2.98□□□□□ -1.93
MRE11P49959 RNA5SP425-201ENST00000410336 112 ntBASIC2.98□□□□□ -1.93
MRE11P49959 AC097463.2-201ENST00000421074 142 ntBASIC2.98□□□□□ -1.93
MRE11P49959 Z98742.2-201ENST00000431564 187 ntBASIC2.98□□□□□ -1.93
MRE11P49959 RNU6-1219P-201ENST00000516143 112 ntBASIC2.98□□□□□ -1.93
MRE11P49959 SCARNA11.3-201ENST00000517276 130 ntBASIC2.98□□□□□ -1.93
MRE11P49959 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.98□□□□□ -1.93
MRE11P49959 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.98□□□□□ -1.93
MRE11P49959 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
MRE11P49959 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.97□□□□□ -1.93
MRE11P49959 AL359854.1-201ENST00000614203 1594 ntBASIC2.97□□□□□ -1.93
MRE11P49959 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
MRE11P49959 SNORD115-30-201ENST00000364117 82 ntBASIC2.97□□□□□ -1.93
MRE11P49959 SNORA19-201ENST00000384737 128 ntBASIC2.97□□□□□ -1.93
MRE11P49959 EIF4EP4-201ENST00000424916 578 ntBASIC2.97□□□□□ -1.93
MRE11P49959 TOMM22P2-201ENST00000430735 237 ntBASIC2.97□□□□□ -1.93
MRE11P49959 Y_RNA.637-201ENST00000459424 114 ntBASIC2.97□□□□□ -1.93
MRE11P49959 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.97□□□□□ -1.93
MRE11P49959 HMGB3P3-201ENST00000510526 400 ntBASIC2.97□□□□□ -1.93
MRE11P49959 RNA5SP148-201ENST00000516527 94 ntBASIC2.97□□□□□ -1.93
MRE11P49959 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.97□□□□□ -1.93
MRE11P49959 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.97□□□□□ -1.93
MRE11P49959 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
MRE11P49959 AC010329.5-201ENST00000623497 2174 ntBASIC2.97□□□□□ -1.93
MRE11P49959 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
MRE11P49959 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.96□□□□□ -1.93
MRE11P49959 AC005336.3-201ENST00000623833 2679 ntBASIC2.96□□□□□ -1.93
MRE11P49959 RNA5SP393-201ENST00000363423 117 ntBASIC2.96□□□□□ -1.94
MRE11P49959 SNORD32B-201ENST00000364460 84 ntBASIC2.96□□□□□ -1.94
MRE11P49959 AL357139.1-201ENST00000407792 426 ntBASIC2.96□□□□□ -1.94
MRE11P49959 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.96□□□□□ -1.94
MRE11P49959 HMGN2P23-201ENST00000456759 269 ntBASIC2.96□□□□□ -1.94
MRE11P49959 AC091021.1-201ENST00000468051 388 ntBASIC2.96□□□□□ -1.94
MRE11P49959 AC140059.1-201ENST00000489238 361 ntBASIC2.96□□□□□ -1.94
MRE11P49959 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.96□□□□□ -1.94
MRE11P49959 AC009127.3-201ENST00000570531 403 ntBASIC2.96□□□□□ -1.94
MRE11P49959 MIR4498-201ENST00000577599 66 ntBASIC2.96□□□□□ -1.94
MRE11P49959 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.96□□□□□ -1.94
MRE11P49959 AC008873.1-201ENST00000625051 138 ntBASIC2.96□□□□□ -1.94
MRE11P49959 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.96□□□□□ -1.94
MRE11P49959 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.96□□□□□ -1.94
MRE11P49959 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
MRE11P49959 U3.8-201ENST00000363675 217 ntBASIC2.95□□□□□ -1.94
MRE11P49959 Y_RNA.243-201ENST00000364481 109 ntBASIC2.95□□□□□ -1.94
MRE11P49959 RNU6-763P-201ENST00000390865 106 ntBASIC2.95□□□□□ -1.94
MRE11P49959 AL031003.1-201ENST00000404229 172 ntBASIC2.95□□□□□ -1.94
MRE11P49959 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.95□□□□□ -1.94
MRE11P49959 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.95□□□□□ -1.94
MRE11P49959 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.95□□□□□ -1.94
MRE11P49959 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.95□□□□□ -1.94
MRE11P49959 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.95□□□□□ -1.94
MRE11P49959 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
MRE11P49959 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.95□□□□□ -1.94
MRE11P49959 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
MRE11P49959 RNU6-804P-201ENST00000384286 107 ntBASIC2.94□□□□□ -1.94
MRE11P49959 MIR518E-201ENST00000385252 88 ntBASIC2.94□□□□□ -1.94
MRE11P49959 RNU6-394P-201ENST00000410735 107 ntBASIC2.94□□□□□ -1.94
MRE11P49959 AL135790.2-201ENST00000437701 267 ntBASIC2.94□□□□□ -1.94
MRE11P49959 MRPS36P2-201ENST00000512569 299 ntBASIC2.94□□□□□ -1.94
MRE11P49959 RNU7-200P-201ENST00000516105 62 ntBASIC2.94□□□□□ -1.94
MRE11P49959 MIR3144-201ENST00000579460 79 ntBASIC2.94□□□□□ -1.94
MRE11P49959 MIR4765-201ENST00000585007 77 ntBASIC2.94□□□□□ -1.94
MRE11P49959 RPL30P11-203ENST00000598995 310 ntBASIC2.94□□□□□ -1.94
MRE11P49959 AL670379.2-201ENST00000604983 252 ntBASIC2.94□□□□□ -1.94
MRE11P49959 RPL17P51-201ENST00000605218 238 ntBASIC2.94□□□□□ -1.94
MRE11P49959 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.94□□□□□ -1.94
MRE11P49959 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
MRE11P49959 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.93□□□□□ -1.94
MRE11P49959 AC007336.1-201ENST00000576365 3828 ntBASIC2.93□□□□□ -1.94
MRE11P49959 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
MRE11P49959 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
MRE11P49959 RNU6-801P-201ENST00000364087 105 ntBASIC2.93□□□□□ -1.94
MRE11P49959 RNY1P5-201ENST00000383890 115 ntBASIC2.93□□□□□ -1.94
MRE11P49959 Y_RNA.571-201ENST00000384753 98 ntBASIC2.93□□□□□ -1.94
MRE11P49959 MIR548B-201ENST00000385247 97 ntBASIC2.93□□□□□ -1.94
MRE11P49959 RNU6-1135P-201ENST00000411083 103 ntBASIC2.93□□□□□ -1.94
MRE11P49959 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
MRE11P49959 AL445687.1-201ENST00000439946 251 ntBASIC2.93□□□□□ -1.94
MRE11P49959 U8.19-201ENST00000459095 133 ntBASIC2.93□□□□□ -1.94
MRE11P49959 MTND5P41-201ENST00000517498 206 ntBASIC2.93□□□□□ -1.94
MRE11P49959 SUMO2P18-201ENST00000518873 252 ntBASIC2.93□□□□□ -1.94
MRE11P49959 AP000942.3-201ENST00000603702 160 ntBASIC2.93□□□□□ -1.94
MRE11P49959 AC104465.1-201ENST00000611365 139 ntBASIC2.93□□□□□ -1.94
MRE11P49959 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.93□□□□□ -1.94
MRE11P49959 AL078604.3-201ENST00000615580 211 ntBASIC2.93□□□□□ -1.94
MRE11P49959 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.93□□□□□ -1.94
MRE11P49959 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.93□□□□□ -1.94
MRE11P49959 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.93□□□□□ -1.94
MRE11P49959 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
MRE11P49959 RNU6-461P-201ENST00000364195 107 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms