Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 Y_RNA.557-201ENST00000384680 107 ntBASIC1.84□□□□□ -2.11
MTHFRP42898 MIR548B-201ENST00000385247 97 ntBASIC1.84□□□□□ -2.11
MTHFRP42898 AL590004.1-201ENST00000405321 300 ntBASIC1.84□□□□□ -2.11
MTHFRP42898 Y_RNA.592-201ENST00000410274 109 ntBASIC1.84□□□□□ -2.11
MTHFRP42898 RNA5SP100-201ENST00000410903 110 ntBASIC1.84□□□□□ -2.11
MTHFRP42898 RNA5SP59-201ENST00000410922 110 ntBASIC1.84□□□□□ -2.11
MTHFRP42898 RNU6-1001P-201ENST00000411265 100 ntBASIC1.84□□□□□ -2.11
MTHFRP42898 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.84□□□□□ -2.11
MTHFRP42898 AC096644.2-201ENST00000429278 159 ntBASIC1.84□□□□□ -2.11
MTHFRP42898 AC099677.2-201ENST00000436385 175 ntBASIC1.84□□□□□ -2.11
MTHFRP42898 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.84□□□□□ -2.11
MTHFRP42898 AC011406.1-201ENST00000512440 370 ntBASIC1.84□□□□□ -2.11
MTHFRP42898 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.84□□□□□ -2.11
MTHFRP42898 AC090617.3-201ENST00000573670 475 ntBASIC1.84□□□□□ -2.11
MTHFRP42898 MIR4680-201ENST00000580906 66 ntBASIC1.84□□□□□ -2.11
MTHFRP42898 MIR5188-201ENST00000583467 113 ntBASIC1.84□□□□□ -2.11
MTHFRP42898 AC125232.2-201ENST00000592457 143 ntBASIC1.84□□□□□ -2.11
MTHFRP42898 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.84□□□□□ -2.11
MTHFRP42898 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.84□□□□□ -2.11
MTHFRP42898 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.84□□□□□ -2.11
MTHFRP42898 AL606534.2-204ENST00000635008 178 ntBASIC1.84□□□□□ -2.11
MTHFRP42898 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.84□□□□□ -2.11
MTHFRP42898 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
MTHFRP42898 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
MTHFRP42898 Y_RNA.796-201ENST00000364268 102 ntBASIC1.83□□□□□ -2.12
MTHFRP42898 Y_RNA.799-201ENST00000364992 102 ntBASIC1.83□□□□□ -2.12
MTHFRP42898 Y_RNA.314-201ENST00000365114 102 ntBASIC1.83□□□□□ -2.12
MTHFRP42898 MIR625-201ENST00000385047 85 ntBASIC1.83□□□□□ -2.12
MTHFRP42898 MRPL42P3-201ENST00000401492 326 ntBASIC1.83□□□□□ -2.12
MTHFRP42898 EIF1P2-201ENST00000428233 350 ntBASIC1.83□□□□□ -2.12
MTHFRP42898 RNU6-475P-201ENST00000516073 104 ntBASIC1.83□□□□□ -2.12
MTHFRP42898 RNU7-4P-201ENST00000516961 62 ntBASIC1.83□□□□□ -2.12
MTHFRP42898 RNU6-988P-201ENST00000519081 107 ntBASIC1.83□□□□□ -2.12
MTHFRP42898 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.83□□□□□ -2.12
MTHFRP42898 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.83□□□□□ -2.12
MTHFRP42898 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.83□□□□□ -2.12
MTHFRP42898 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.83□□□□□ -2.12
MTHFRP42898 snoZ196.1-201ENST00000625269 89 ntBASIC1.83□□□□□ -2.12
MTHFRP42898 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.83□□□□□ -2.12
MTHFRP42898 MTND5P35-201ENST00000557537 1720 ntBASIC1.83□□□□□ -2.12
MTHFRP42898 AC091812.1-201ENST00000432235 1948 ntBASIC1.82□□□□□ -2.12
MTHFRP42898 RNU6-738P-201ENST00000384531 106 ntBASIC1.82□□□□□ -2.12
MTHFRP42898 RNU6-1160P-201ENST00000384546 104 ntBASIC1.82□□□□□ -2.12
MTHFRP42898 MIR518E-201ENST00000385252 88 ntBASIC1.82□□□□□ -2.12
MTHFRP42898 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.82□□□□□ -2.12
MTHFRP42898 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.82□□□□□ -2.12
MTHFRP42898 RNU7-95P-201ENST00000459222 64 ntBASIC1.82□□□□□ -2.12
MTHFRP42898 SNORA25.10-201ENST00000515926 124 ntBASIC1.82□□□□□ -2.12
MTHFRP42898 Y_RNA.683-201ENST00000516508 93 ntBASIC1.82□□□□□ -2.12
MTHFRP42898 AC022868.1-201ENST00000517767 391 ntBASIC1.82□□□□□ -2.12
MTHFRP42898 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.82□□□□□ -2.12
MTHFRP42898 MIR4285-201ENST00000581001 85 ntBASIC1.82□□□□□ -2.12
MTHFRP42898 AC104695.3-201ENST00000604052 296 ntBASIC1.82□□□□□ -2.12
MTHFRP42898 AL360085.1-201ENST00000604713 532 ntBASIC1.82□□□□□ -2.12
MTHFRP42898 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.82□□□□□ -2.12
MTHFRP42898 AC005592.1-201ENST00000566527 1640 ntBASIC1.81□□□□□ -2.12
MTHFRP42898 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
MTHFRP42898 RNA5SP361-201ENST00000362686 118 ntBASIC1.81□□□□□ -2.12
MTHFRP42898 Y_RNA.158-201ENST00000363651 101 ntBASIC1.81□□□□□ -2.12
MTHFRP42898 RNU6-879P-201ENST00000364328 108 ntBASIC1.81□□□□□ -2.12
MTHFRP42898 SNORA16.1-201ENST00000364597 132 ntBASIC1.81□□□□□ -2.12
MTHFRP42898 RNU6-708P-201ENST00000384217 107 ntBASIC1.81□□□□□ -2.12
MTHFRP42898 MIR606-201ENST00000384851 96 ntBASIC1.81□□□□□ -2.12
MTHFRP42898 AL117342.1-201ENST00000404861 406 ntBASIC1.81□□□□□ -2.12
MTHFRP42898 AC113618.1-201ENST00000416747 285 ntBASIC1.81□□□□□ -2.12
MTHFRP42898 HSPE1P21-201ENST00000438283 308 ntBASIC1.81□□□□□ -2.12
MTHFRP42898 RNU7-169P-201ENST00000459456 61 ntBASIC1.81□□□□□ -2.12
MTHFRP42898 SUB1P4-201ENST00000566062 339 ntBASIC1.81□□□□□ -2.12
MTHFRP42898 BX248123.2-201ENST00000606318 124 ntBASIC1.81□□□□□ -2.12
MTHFRP42898 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.81□□□□□ -2.12
MTHFRP42898 U2.1-201ENST00000618978 145 ntBASIC1.81□□□□□ -2.12
MTHFRP42898 Y_RNA.39-201ENST00000362620 98 ntBASIC1.8□□□□□ -2.12
MTHFRP42898 U3.8-201ENST00000363675 217 ntBASIC1.8□□□□□ -2.12
MTHFRP42898 RNU1-96P-201ENST00000364163 162 ntBASIC1.8□□□□□ -2.12
MTHFRP42898 RNU6-318P-201ENST00000384283 103 ntBASIC1.8□□□□□ -2.12
MTHFRP42898 MIR329-1-201ENST00000385028 80 ntBASIC1.8□□□□□ -2.12
MTHFRP42898 MIR30A-201ENST00000385092 71 ntBASIC1.8□□□□□ -2.12
MTHFRP42898 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
MTHFRP42898 SNORA69.1-201ENST00000390904 137 ntBASIC1.8□□□□□ -2.12
MTHFRP42898 AC016909.1-201ENST00000415916 166 ntBASIC1.8□□□□□ -2.12
MTHFRP42898 MTND2P23-201ENST00000422990 651 ntBASIC1.8□□□□□ -2.12
MTHFRP42898 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.8□□□□□ -2.12
MTHFRP42898 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.8□□□□□ -2.12
MTHFRP42898 AC010409.1-201ENST00000487382 476 ntBASIC1.8□□□□□ -2.12
MTHFRP42898 RNU6-911P-201ENST00000516523 104 ntBASIC1.8□□□□□ -2.12
MTHFRP42898 SNORA40.14-201ENST00000516543 86 ntBASIC1.8□□□□□ -2.12
MTHFRP42898 RNU6-107P-201ENST00000516643 102 ntBASIC1.8□□□□□ -2.12
MTHFRP42898 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.8□□□□□ -2.12
MTHFRP42898 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.8□□□□□ -2.12
MTHFRP42898 AC006600.1-201ENST00000572529 153 ntBASIC1.8□□□□□ -2.12
MTHFRP42898 VN1R91P-201ENST00000594377 169 ntBASIC1.8□□□□□ -2.12
MTHFRP42898 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.8□□□□□ -2.12
MTHFRP42898 RNU6-1301P-201ENST00000362724 104 ntBASIC1.79□□□□□ -2.12
MTHFRP42898 Y_RNA.116-201ENST00000363292 103 ntBASIC1.79□□□□□ -2.12
MTHFRP42898 Y_RNA.162-201ENST00000363683 102 ntBASIC1.79□□□□□ -2.12
MTHFRP42898 AC117470.1-201ENST00000381974 330 ntBASIC1.79□□□□□ -2.12
MTHFRP42898 RNU6-639P-201ENST00000384074 107 ntBASIC1.79□□□□□ -2.12
MTHFRP42898 RNU6-823P-201ENST00000391042 103 ntBASIC1.79□□□□□ -2.12
MTHFRP42898 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
MTHFRP42898 HMGN2P34-201ENST00000437647 269 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms