Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.84□□□□□ -2.11
APOBEC1P41238 SDR42E1P4-201ENST00000620894 481 ntBASIC1.84□□□□□ -2.11
APOBEC1P41238 AC099654.10-201ENST00000640395 161 ntBASIC1.84□□□□□ -2.11
APOBEC1P41238 ZNF702P-202ENST00000434269 1966 ntBASIC1.84□□□□□ -2.11
APOBEC1P41238 ZNF355P-201ENST00000427301 3216 ntBASIC1.83□□□□□ -2.12
APOBEC1P41238 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
APOBEC1P41238 SNORD114-7-201ENST00000362520 77 ntBASIC1.83□□□□□ -2.12
APOBEC1P41238 RNU6-770P-201ENST00000363929 105 ntBASIC1.83□□□□□ -2.12
APOBEC1P41238 RNU6-324P-201ENST00000363957 106 ntBASIC1.83□□□□□ -2.12
APOBEC1P41238 SNORD115-30-201ENST00000364117 82 ntBASIC1.83□□□□□ -2.12
APOBEC1P41238 Y_RNA.214-201ENST00000364201 112 ntBASIC1.83□□□□□ -2.12
APOBEC1P41238 SNORA67.3-201ENST00000384366 140 ntBASIC1.83□□□□□ -2.12
APOBEC1P41238 MIR873-201ENST00000401120 77 ntBASIC1.83□□□□□ -2.12
APOBEC1P41238 AL023284.1-201ENST00000403956 276 ntBASIC1.83□□□□□ -2.12
APOBEC1P41238 AC096920.1-201ENST00000423991 241 ntBASIC1.83□□□□□ -2.12
APOBEC1P41238 AC010154.1-201ENST00000425857 269 ntBASIC1.83□□□□□ -2.12
APOBEC1P41238 AL121890.1-201ENST00000435457 205 ntBASIC1.83□□□□□ -2.12
APOBEC1P41238 RPL23AP94-201ENST00000512518 302 ntBASIC1.83□□□□□ -2.12
APOBEC1P41238 SNORA70.12-201ENST00000516084 153 ntBASIC1.83□□□□□ -2.12
APOBEC1P41238 RNVU1-2-201ENST00000516326 135 ntBASIC1.83□□□□□ -2.12
APOBEC1P41238 AC024995.1-201ENST00000523014 93 ntBASIC1.83□□□□□ -2.12
APOBEC1P41238 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.83□□□□□ -2.12
APOBEC1P41238 AC136932.1-201ENST00000574771 208 ntBASIC1.83□□□□□ -2.12
APOBEC1P41238 MIR5094-201ENST00000578766 85 ntBASIC1.83□□□□□ -2.12
APOBEC1P41238 MIR4648-201ENST00000580107 72 ntBASIC1.83□□□□□ -2.12
APOBEC1P41238 MIR4300-201ENST00000581016 96 ntBASIC1.83□□□□□ -2.12
APOBEC1P41238 AL360085.1-201ENST00000604713 532 ntBASIC1.83□□□□□ -2.12
APOBEC1P41238 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.83□□□□□ -2.12
APOBEC1P41238 AL359075.3-201ENST00000613288 217 ntBASIC1.83□□□□□ -2.12
APOBEC1P41238 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
APOBEC1P41238 RNA5SP276-201ENST00000362580 94 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 SNORA27.1-201ENST00000362604 124 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 U8.2-201ENST00000363156 134 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 RNU6-1019P-201ENST00000364424 107 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 RNA5SP138-201ENST00000365098 114 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 MIR17-201ENST00000385012 84 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 SNORD115-46-201ENST00000390982 71 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 RNA5SP323-201ENST00000391094 133 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 RNA5SP467-201ENST00000391274 118 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 AL512604.1-201ENST00000404812 257 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 U3.40-201ENST00000408706 208 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 RNU6-1199P-201ENST00000411249 104 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 ELOCP20-201ENST00000422460 345 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 HMGN2P38-201ENST00000423806 265 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
APOBEC1P41238 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.82□□□□□ -2.12
APOBEC1P41238 MRPS10P1-201ENST00000448483 130 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 MTND5P22-201ENST00000458380 195 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 TRBV12-1-201ENST00000479785 344 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 RNA5SP20-201ENST00000515976 84 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 RNU6-327P-201ENST00000516270 127 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 RNU1-142P-201ENST00000516682 145 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 AC023157.2-201ENST00000540596 141 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 MIR4287-201ENST00000579398 78 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 MIR4438-201ENST00000585271 93 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.82□□□□□ -2.12
APOBEC1P41238 U6.73-201ENST00000619194 103 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.82□□□□□ -2.12
APOBEC1P41238 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
APOBEC1P41238 Y_RNA.19-201ENST00000362462 99 ntBASIC1.81□□□□□ -2.12
APOBEC1P41238 SNORD113-8-201ENST00000363497 74 ntBASIC1.81□□□□□ -2.12
APOBEC1P41238 RNA5SP160-201ENST00000364866 120 ntBASIC1.81□□□□□ -2.12
APOBEC1P41238 RNU6-407P-201ENST00000365280 104 ntBASIC1.81□□□□□ -2.12
APOBEC1P41238 RNU4-52P-201ENST00000384209 138 ntBASIC1.81□□□□□ -2.12
APOBEC1P41238 SNORA70B-201ENST00000384210 135 ntBASIC1.81□□□□□ -2.12
APOBEC1P41238 AL031003.1-201ENST00000404229 172 ntBASIC1.81□□□□□ -2.12
APOBEC1P41238 RNU4-30P-201ENST00000410245 143 ntBASIC1.81□□□□□ -2.12
APOBEC1P41238 RNU6-1186P-201ENST00000410429 97 ntBASIC1.81□□□□□ -2.12
APOBEC1P41238 AL139156.1-201ENST00000412785 841 ntBASIC1.81□□□□□ -2.12
APOBEC1P41238 AL158823.1-201ENST00000418441 478 ntBASIC1.81□□□□□ -2.12
APOBEC1P41238 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.81□□□□□ -2.12
APOBEC1P41238 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
APOBEC1P41238 AL731563.1-201ENST00000442202 214 ntBASIC1.81□□□□□ -2.12
APOBEC1P41238 RPL23AP7-203ENST00000449021 469 ntBASIC1.81□□□□□ -2.12
APOBEC1P41238 RPS27P21-201ENST00000486977 252 ntBASIC1.81□□□□□ -2.12
APOBEC1P41238 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.81□□□□□ -2.12
APOBEC1P41238 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.81□□□□□ -2.12
APOBEC1P41238 AC116312.1-201ENST00000606841 314 ntBASIC1.81□□□□□ -2.12
APOBEC1P41238 Y_RNA.783-201ENST00000613546 102 ntBASIC1.81□□□□□ -2.12
APOBEC1P41238 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
APOBEC1P41238 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.81□□□□□ -2.12
APOBEC1P41238 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.8□□□□□ -2.12
APOBEC1P41238 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.8□□□□□ -2.12
APOBEC1P41238 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
APOBEC1P41238 Y_RNA.361-201ENST00000365515 120 ntBASIC1.8□□□□□ -2.12
APOBEC1P41238 Y_RNA.459-201ENST00000384251 102 ntBASIC1.8□□□□□ -2.12
APOBEC1P41238 SNORA8-201ENST00000384574 139 ntBASIC1.8□□□□□ -2.12
APOBEC1P41238 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
APOBEC1P41238 RNU11-5P-201ENST00000391216 129 ntBASIC1.8□□□□□ -2.12
APOBEC1P41238 RNA5SP212-201ENST00000391223 107 ntBASIC1.8□□□□□ -2.12
APOBEC1P41238 RPL21P1-201ENST00000399532 476 ntBASIC1.8□□□□□ -2.12
APOBEC1P41238 AC069257.2-201ENST00000441819 155 ntBASIC1.8□□□□□ -2.12
APOBEC1P41238 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.8□□□□□ -2.12
APOBEC1P41238 LINC01399-202ENST00000458450 244 ntBASIC1.8□□□□□ -2.12
APOBEC1P41238 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.8□□□□□ -2.12
APOBEC1P41238 AC025465.3-201ENST00000510570 311 ntBASIC1.8□□□□□ -2.12
APOBEC1P41238 RNU7-99P-201ENST00000516271 62 ntBASIC1.8□□□□□ -2.12
APOBEC1P41238 SUB1P4-201ENST00000566062 339 ntBASIC1.8□□□□□ -2.12
APOBEC1P41238 MIR4448-201ENST00000584360 86 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms