Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AL117187.1-201ENST00000555482 181 ntBASIC1.82□□□□□ -2.12
HNF4AP41235 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.82□□□□□ -2.12
HNF4AP41235 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.82□□□□□ -2.12
HNF4AP41235 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
HNF4AP41235 MIR424-201ENST00000362227 98 ntBASIC1.81□□□□□ -2.12
HNF4AP41235 Y_RNA.105-201ENST00000363182 111 ntBASIC1.81□□□□□ -2.12
HNF4AP41235 RNU6-1309P-201ENST00000363305 108 ntBASIC1.81□□□□□ -2.12
HNF4AP41235 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.81□□□□□ -2.12
HNF4AP41235 Y_RNA.512-201ENST00000384518 102 ntBASIC1.81□□□□□ -2.12
HNF4AP41235 MIR568-201ENST00000385036 95 ntBASIC1.81□□□□□ -2.12
HNF4AP41235 RNU6-1109P-201ENST00000391187 107 ntBASIC1.81□□□□□ -2.12
HNF4AP41235 RPL21P1-201ENST00000399532 476 ntBASIC1.81□□□□□ -2.12
HNF4AP41235 MRPL35P1-201ENST00000404272 572 ntBASIC1.81□□□□□ -2.12
HNF4AP41235 MIR1261-201ENST00000408659 82 ntBASIC1.81□□□□□ -2.12
HNF4AP41235 AC073910.1-201ENST00000445047 438 ntBASIC1.81□□□□□ -2.12
HNF4AP41235 AC016925.1-201ENST00000458303 298 ntBASIC1.81□□□□□ -2.12
HNF4AP41235 AC010409.1-201ENST00000487382 476 ntBASIC1.81□□□□□ -2.12
HNF4AP41235 AC025465.3-201ENST00000510570 311 ntBASIC1.81□□□□□ -2.12
HNF4AP41235 AC107393.1-201ENST00000512403 346 ntBASIC1.81□□□□□ -2.12
HNF4AP41235 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.81□□□□□ -2.12
HNF4AP41235 AC008269.2-201ENST00000561915 1105 ntBASIC1.81□□□□□ -2.12
HNF4AP41235 AC055872.1-201ENST00000570978 278 ntBASIC1.81□□□□□ -2.12
HNF4AP41235 MIR3122-201ENST00000577243 73 ntBASIC1.81□□□□□ -2.12
HNF4AP41235 AL162730.1-201ENST00000605734 292 ntBASIC1.81□□□□□ -2.12
HNF4AP41235 SNORD11B-201ENST00000607707 90 ntBASIC1.81□□□□□ -2.12
HNF4AP41235 MIR8074-201ENST00000615081 81 ntBASIC1.81□□□□□ -2.12
HNF4AP41235 AC022513.1-201ENST00000624512 117 ntBASIC1.81□□□□□ -2.12
HNF4AP41235 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.81□□□□□ -2.12
HNF4AP41235 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.81□□□□□ -2.12
HNF4AP41235 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HNF4AP41235 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HNF4AP41235 MIR340-201ENST00000362125 95 ntBASIC1.8□□□□□ -2.12
HNF4AP41235 Y_RNA.143-201ENST00000363520 106 ntBASIC1.8□□□□□ -2.12
HNF4AP41235 RNU5F-3P-201ENST00000363767 117 ntBASIC1.8□□□□□ -2.12
HNF4AP41235 Y_RNA.222-201ENST00000364264 102 ntBASIC1.8□□□□□ -2.12
HNF4AP41235 SNORA40.18-201ENST00000391200 128 ntBASIC1.8□□□□□ -2.12
HNF4AP41235 RNU6-121P-201ENST00000410525 99 ntBASIC1.8□□□□□ -2.12
HNF4AP41235 UBL5P3-201ENST00000475112 231 ntBASIC1.8□□□□□ -2.12
HNF4AP41235 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.8□□□□□ -2.12
HNF4AP41235 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.8□□□□□ -2.12
HNF4AP41235 AP002001.1-203ENST00000534002 267 ntBASIC1.8□□□□□ -2.12
HNF4AP41235 AC018448.1-201ENST00000552843 316 ntBASIC1.8□□□□□ -2.12
HNF4AP41235 MIR5094-201ENST00000578766 85 ntBASIC1.8□□□□□ -2.12
HNF4AP41235 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.8□□□□□ -2.12
HNF4AP41235 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.8□□□□□ -2.12
HNF4AP41235 AC068205.3-201ENST00000636385 468 ntBASIC1.8□□□□□ -2.12
HNF4AP41235 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.79□□□□□ -2.12
HNF4AP41235 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.79□□□□□ -2.12
HNF4AP41235 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HNF4AP41235 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HNF4AP41235 Y_RNA.64-201ENST00000362845 102 ntBASIC1.79□□□□□ -2.12
HNF4AP41235 RNU6-238P-201ENST00000363313 106 ntBASIC1.79□□□□□ -2.12
HNF4AP41235 RNU6-626P-201ENST00000363354 107 ntBASIC1.79□□□□□ -2.12
HNF4AP41235 RNU6-770P-201ENST00000363929 105 ntBASIC1.79□□□□□ -2.12
HNF4AP41235 RNU6-1305P-201ENST00000364353 104 ntBASIC1.79□□□□□ -2.12
HNF4AP41235 SNORA16.1-201ENST00000364597 132 ntBASIC1.79□□□□□ -2.12
HNF4AP41235 Y_RNA.439-201ENST00000384119 94 ntBASIC1.79□□□□□ -2.12
HNF4AP41235 Y_RNA.498-201ENST00000384460 102 ntBASIC1.79□□□□□ -2.12
HNF4AP41235 MIR548B-201ENST00000385247 97 ntBASIC1.79□□□□□ -2.12
HNF4AP41235 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
HNF4AP41235 MIR1283-1-201ENST00000408494 87 ntBASIC1.79□□□□□ -2.12
HNF4AP41235 MTND3P2-201ENST00000438452 342 ntBASIC1.79□□□□□ -2.12
HNF4AP41235 UQCRBP2-201ENST00000447827 297 ntBASIC1.79□□□□□ -2.12
HNF4AP41235 AC074133.1-201ENST00000515696 183 ntBASIC1.79□□□□□ -2.12
HNF4AP41235 RNU6-635P-201ENST00000516651 102 ntBASIC1.79□□□□□ -2.12
HNF4AP41235 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.79□□□□□ -2.12
HNF4AP41235 CYCSP23-201ENST00000519781 313 ntBASIC1.79□□□□□ -2.12
HNF4AP41235 AC110588.1-201ENST00000559699 137 ntBASIC1.79□□□□□ -2.12
HNF4AP41235 AC136932.1-201ENST00000574771 208 ntBASIC1.79□□□□□ -2.12
HNF4AP41235 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.79□□□□□ -2.12
HNF4AP41235 Y_RNA.772-201ENST00000606692 102 ntBASIC1.79□□□□□ -2.12
HNF4AP41235 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.79□□□□□ -2.12
HNF4AP41235 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.79□□□□□ -2.12
HNF4AP41235 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HNF4AP41235 MIR126-201ENST00000362291 85 ntBASIC1.78□□□□□ -2.12
HNF4AP41235 Y_RNA.47-201ENST00000362697 108 ntBASIC1.78□□□□□ -2.12
HNF4AP41235 Y_RNA.152-201ENST00000363578 100 ntBASIC1.78□□□□□ -2.12
HNF4AP41235 RNU6-112P-201ENST00000363599 104 ntBASIC1.78□□□□□ -2.12
HNF4AP41235 Y_RNA.183-201ENST00000363882 113 ntBASIC1.78□□□□□ -2.12
HNF4AP41235 RNU6-20P-201ENST00000384106 107 ntBASIC1.78□□□□□ -2.12
HNF4AP41235 RNU6-937P-201ENST00000384325 106 ntBASIC1.78□□□□□ -2.12
HNF4AP41235 MIR586-201ENST00000385035 97 ntBASIC1.78□□□□□ -2.12
HNF4AP41235 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.78□□□□□ -2.12
HNF4AP41235 DYNLT3P2-201ENST00000442517 295 ntBASIC1.78□□□□□ -2.12
HNF4AP41235 LINC01399-202ENST00000458450 244 ntBASIC1.78□□□□□ -2.12
HNF4AP41235 RNU6-625P-201ENST00000459412 107 ntBASIC1.78□□□□□ -2.12
HNF4AP41235 HMGN2P9-201ENST00000476875 229 ntBASIC1.78□□□□□ -2.12
HNF4AP41235 AC098869.1-201ENST00000481627 292 ntBASIC1.78□□□□□ -2.12
HNF4AP41235 RPL23AP63-201ENST00000498752 471 ntBASIC1.78□□□□□ -2.12
HNF4AP41235 RNA5SP182-201ENST00000516064 82 ntBASIC1.78□□□□□ -2.12
HNF4AP41235 RNY3P15-201ENST00000516297 97 ntBASIC1.78□□□□□ -2.12
HNF4AP41235 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.78□□□□□ -2.12
HNF4AP41235 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.78□□□□□ -2.12
HNF4AP41235 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.78□□□□□ -2.12
HNF4AP41235 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.78□□□□□ -2.12
HNF4AP41235 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.78□□□□□ -2.12
HNF4AP41235 Y_RNA.19-201ENST00000362462 99 ntBASIC1.77□□□□□ -2.13
HNF4AP41235 Y_RNA.276-201ENST00000364732 109 ntBASIC1.77□□□□□ -2.13
HNF4AP41235 RNU6-338P-201ENST00000383888 105 ntBASIC1.77□□□□□ -2.13
HNF4AP41235 RNU6-439P-201ENST00000384188 106 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms